RNA–Protein interactions for RNA: YNL224C

SQS1, Transcript of Protein that stimulates the ATPase and helicase activities of Prp43p, yeast

Gene SQS1, Length 2,304 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SQS1	YNL224C	YNL046W	P53956	172 aa		2.75	□□□□□ -1.97
SQS1	YNL224C	AVO2	Q04749	426 aa		2.75	□□□□□ -1.97
SQS1	YNL224C	YLR012C	Q07927	99 aa		2.75	□□□□□ -1.97
SQS1	YNL224C	MIC10	Q96VH5	97 aa		2.75	□□□□□ -1.97
SQS1	YNL224C	ENV10	Q99382	181 aa		2.75	□□□□□ -1.97
SQS1	YNL224C	NUP188	P52593	1655 aa	Known RBP	2.75	□□□□□ -1.97
SQS1	YNL224C	HEM2	P05373	342 aa		2.75	□□□□□ -1.97
SQS1	YNL224C	RAD6	P06104	172 aa		2.75	□□□□□ -1.97
SQS1	YNL224C	GGC1	P38988	300 aa		2.75	□□□□□ -1.97
SQS1	YNL224C	SIM1	P40472	476 aa		2.75	□□□□□ -1.97
SQS1	YNL224C	PHS1	P40857	217 aa		2.75	□□□□□ -1.97
SQS1	YNL224C	WWM1	P43582	211 aa	Known RBP	2.75	□□□□□ -1.97
SQS1	YNL224C	JJJ3	P47138	172 aa		2.75	□□□□□ -1.97
SQS1	YNL224C	CAX4	P53223	239 aa		2.75	□□□□□ -1.97
SQS1	YNL224C	YGR050C	P53231	118 aa		2.75	□□□□□ -1.97
SQS1	YNL224C	FIT1	Q04433	528 aa		2.75	□□□□□ -1.97
SQS1	YNL224C	YDR119W-A	Q2V2P9	66 aa		2.75	□□□□□ -1.97
SQS1	YNL224C	YBR255C-A	Q3E776	120 aa		2.75	□□□□□ -1.97
SQS1	YNL224C	SCS22	Q6Q595	175 aa		2.75	□□□□□ -1.97
SQS1	YNL224C	MYO1	P08964	1928 aa		2.75	□□□□□ -1.97
SQS1	YNL224C	DNF3	Q12674	1656 aa		2.74	□□□□□ -1.97
SQS1	YNL224C	CYC1	P00044	109 aa	Predicted RBP	2.74	□□□□□ -1.97
SQS1	YNL224C	CNE1	P27825	502 aa		2.74	□□□□□ -1.97
SQS1	YNL224C	MTR2	P34232	184 aa	Known RBP	2.74	□□□□□ -1.97
SQS1	YNL224C	APS1	P35181	156 aa		2.74	□□□□□ -1.97
SQS1	YNL224C	ALG9	P53868	555 aa	Known RBP	2.74	□□□□□ -1.97
SQS1	YNL224C	SPG4	Q04438	115 aa		2.74	□□□□□ -1.97
SQS1	YNL224C	ANT1	Q06497	328 aa		2.74	□□□□□ -1.97
SQS1	YNL224C	DFM1	Q12743	341 aa	Known RBP	2.74	□□□□□ -1.97
SQS1	YNL224C	ATG40	Q99325	256 aa		2.74	□□□□□ -1.97
SQS1	YNL224C	RPL15A	P05748	204 aa	Known RBP	2.74	□□□□□ -1.97
SQS1	YNL224C	MAK31	P23059	88 aa		2.74	□□□□□ -1.97
SQS1	YNL224C	RPL32	P38061	130 aa	Known RBP	2.74	□□□□□ -1.97
SQS1	YNL224C	NSA2	P40078	261 aa	Known RBP	2.74	□□□□□ -1.97
SQS1	YNL224C	SDS23	P53172	527 aa		2.74	□□□□□ -1.97
SQS1	YNL224C	YNR064C	P53750	290 aa		2.74	□□□□□ -1.97
SQS1	YNL224C	RPL15B	P54780	204 aa	Predicted RBP	2.74	□□□□□ -1.97
SQS1	YNL224C	EST3	Q03096	181 aa		2.74	□□□□□ -1.97
SQS1	YNL224C	YMR090W	Q04304	227 aa	Known RBP	2.74	□□□□□ -1.97
SQS1	YNL224C	NDD1	Q08887	554 aa		2.74	□□□□□ -1.97
SQS1	YNL224C	YBT1	P32386	1661 aa		2.73	□□□□□ -1.97
SQS1	YNL224C	MSB2	P32334	1306 aa		2.73	□□□□□ -1.97
SQS1	YNL224C	UBC4	P15731	148 aa		2.73	□□□□□ -1.97
SQS1	YNL224C	ANS1	P38832	159 aa		2.73	□□□□□ -1.97
SQS1	YNL224C	GCV3	P39726	170 aa	Predicted RBP	2.73	□□□□□ -1.97
SQS1	YNL224C	CUZ1	P53899	274 aa		2.73	□□□□□ -1.97
SQS1	YNL224C	TSC3	Q3E790	80 aa		2.73	□□□□□ -1.97
SQS1	YNL224C	BCK1	Q01389	1478 aa		2.73	□□□□□ -1.97
SQS1	YNL224C	ARF1	P11076	181 aa	Known RBP	2.73	□□□□□ -1.97
SQS1	YNL224C	RPA12	P32529	125 aa	Known RBP	2.73	□□□□□ -1.97
SQS1	YNL224C	PEX2	P32800	271 aa		2.73	□□□□□ -1.97
SQS1	YNL224C	GPI18	P38211	433 aa		2.73	□□□□□ -1.97
SQS1	YNL224C	PHO88	P38264	188 aa	Predicted RBP	2.73	□□□□□ -1.97
SQS1	YNL224C	PAU15	P40585	124 aa		2.73	□□□□□ -1.97
SQS1	YNL224C	OST1	P41543	476 aa	Known RBP	2.73	□□□□□ -1.97
SQS1	YNL224C	YDR042C	Q03205	200 aa		2.73	□□□□□ -1.97
SQS1	YNL224C	MRP10	O75012	95 aa		2.72	□□□□□ -1.97
SQS1	YNL224C	RPS13	P05756	151 aa	Known RBP	2.72	□□□□□ -1.97
SQS1	YNL224C	RPL40A	P0CH08	128 aa	Known RBP	2.72	□□□□□ -1.97
SQS1	YNL224C	RPL40B	P0CH09	128 aa	Known RBP	2.72	□□□□□ -1.97
SQS1	YNL224C	RPL16A	P26784	199 aa	Known RBP	2.72	□□□□□ -1.97
SQS1	YNL224C	RPL16B	P26785	198 aa	Known RBP	2.72	□□□□□ -1.97
SQS1	YNL224C	AHT1	P29589	182 aa		2.72	□□□□□ -1.97
SQS1	YNL224C	AHP1	P38013	176 aa	Known RBP	2.72	□□□□□ -1.97
SQS1	YNL224C	SFT2	P38166	215 aa		2.72	□□□□□ -1.97
SQS1	YNL224C	POP8	P38208	133 aa		2.72	□□□□□ -1.97
SQS1	YNL224C	YHL018W	P38744	120 aa	Predicted RBP	2.72	□□□□□ -1.97
SQS1	YNL224C	KEG1	P43614	200 aa		2.72	□□□□□ -1.97
SQS1	YNL224C	YGL088W	P53151	121 aa		2.72	□□□□□ -1.97
SQS1	YNL224C	ADD37	Q03233	198 aa		2.72	□□□□□ -1.97
SQS1	YNL224C	YDL057W	Q07379	328 aa		2.72	□□□□□ -1.97
SQS1	YNL224C	YOR186W	Q08560	144 aa		2.72	□□□□□ -1.97
SQS1	YNL224C	YDL211C	Q12121	372 aa		2.72	□□□□□ -1.97
SQS1	YNL224C	SUS1	Q6WNK7	96 aa		2.72	□□□□□ -1.97
SQS1	YNL224C	YCL021W-A	Q96VH3	125 aa		2.72	□□□□□ -1.97
SQS1	YNL224C	TIM9	O74700	87 aa		2.71	□□□□□ -1.97
SQS1	YNL224C	DSS4	P32601	143 aa		2.71	□□□□□ -1.97
SQS1	YNL224C	SDH3	P33421	198 aa		2.71	□□□□□ -1.97
SQS1	YNL224C	YBR292C	P38357	123 aa		2.71	□□□□□ -1.97
SQS1	YNL224C	BNS1	P50084	137 aa		2.71	□□□□□ -1.97
SQS1	YNL224C	YGR164W	P53291	111 aa		2.71	□□□□□ -1.97
SQS1	YNL224C	YOR268C	Q08734	132 aa		2.71	□□□□□ -1.97
SQS1	YNL224C	YLR112W	Q12130	139 aa		2.71	□□□□□ -1.97
SQS1	YNL224C	IML1	P47170	1584 aa		2.71	□□□□□ -1.98
SQS1	YNL224C	SLH1	P53327	1967 aa	Known RBP	2.71	□□□□□ -1.98
SQS1	YNL224C	RPS19A	P07280	144 aa	Known RBP	2.71	□□□□□ -1.98
SQS1	YNL224C	RPS19B	P07281	144 aa	Predicted RBP	2.71	□□□□□ -1.98
SQS1	YNL224C	PET8	P38921	284 aa		2.71	□□□□□ -1.98
SQS1	YNL224C	YAL064W	P39711	94 aa		2.71	□□□□□ -1.98
SQS1	YNL224C	PIR5	P46999	287 aa		2.71	□□□□□ -1.98
SQS1	YNL224C	MPC1	P53157	130 aa	Known RBP	2.71	□□□□□ -1.98
SQS1	YNL224C	NIP7	Q08962	181 aa	Known RBP	2.71	□□□□□ -1.98
SQS1	YNL224C	YAL064W-B	O13512	126 aa		2.7	□□□□□ -1.98
SQS1	YNL224C	SPS100	P13130	326 aa		2.7	□□□□□ -1.98
SQS1	YNL224C	KRE1	P17260	313 aa		2.7	□□□□□ -1.98
SQS1	YNL224C	FUN19	P28003	413 aa	Predicted RBP	2.7	□□□□□ -1.98
SQS1	YNL224C	FYV4	P38783	130 aa	Predicted RBP	2.7	□□□□□ -1.98
SQS1	YNL224C	RPP1	P38786	293 aa		2.7	□□□□□ -1.98
SQS1	YNL224C	CTF8	P38877	133 aa		2.7	□□□□□ -1.98
SQS1	YNL224C	ASP1	P38986	381 aa	Predicted RBP	2.7	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 153.5 ms