RNA–Protein interactions for RNA: YMR185W

RTP1, Transcript of Protein required for the nuclear import and biogenesis of RNA pol II, yeastyeast

Gene RTP1, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTP1YMR185W YLR363W-AQ3E747 85 aa1.5□□□□□ -2.17
RTP1YMR185W YNL162W-AQ3E7A8 72 aa1.5□□□□□ -2.17
RTP1YMR185W HTL1Q9URQ5 78 aa1.5□□□□□ -2.17
RTP1YMR185W PAI3P01094 68 aa1.49□□□□□ -2.17
RTP1YMR185W SEC4P07560 215 aaKnown RBP1.49□□□□□ -2.17
RTP1YMR185W HSP12P22943 109 aaKnown RBP1.49□□□□□ -2.17
RTP1YMR185W ARO2P28777 376 aaKnown RBP1.49□□□□□ -2.17
RTP1YMR185W ECM33P38248 429 aaKnown RBP1.49□□□□□ -2.17
RTP1YMR185W CSH1P38287 376 aa1.49□□□□□ -2.17
RTP1YMR185W YPS6P40583 537 aa1.49□□□□□ -2.17
RTP1YMR185W REE1P40893 198 aa1.49□□□□□ -2.17
RTP1YMR185W TRM9P49957 279 aa1.49□□□□□ -2.17
RTP1YMR185W MIC26P50087 233 aa1.49□□□□□ -2.17
RTP1YMR185W UBC13P52490 153 aa1.49□□□□□ -2.17
RTP1YMR185W SDC1Q03323 175 aa1.49□□□□□ -2.17
RTP1YMR185W VPS71Q03433 280 aa1.49□□□□□ -2.17
RTP1YMR185W PKR1Q03880 122 aaKnown RBP1.49□□□□□ -2.17
RTP1YMR185W RUB1Q03919 77 aa1.49□□□□□ -2.17
RTP1YMR185W SWT1Q12104 458 aa1.49□□□□□ -2.17
RTP1YMR185W POC4Q12245 148 aaPredicted RBP1.49□□□□□ -2.17
RTP1YMR185W UTP23Q12339 254 aaKnown RBP1.49□□□□□ -2.17
RTP1YMR185W GEP5Q12393 293 aa1.49□□□□□ -2.17
RTP1YMR185W YIL102C-AQ2V2P5 75 aa1.49□□□□□ -2.17
RTP1YMR185W TMA7Q3E764 64 aaKnown RBP1.49□□□□□ -2.17
RTP1YMR185W SAL1D6W196 494 aa1.49□□□□□ -2.17
RTP1YMR185W HEM4P06174 275 aa1.49□□□□□ -2.17
RTP1YMR185W PIS1P06197 220 aaKnown RBP1.49□□□□□ -2.17
RTP1YMR185W RPS16AP0CX51 143 aaKnown RBP1.49□□□□□ -2.17
RTP1YMR185W RPS16BP0CX52 143 aaKnown RBP1.49□□□□□ -2.17
RTP1YMR185W PRY2P36110 329 aa1.49□□□□□ -2.17
RTP1YMR185W YKR070WP36151 352 aaKnown RBP1.49□□□□□ -2.17
RTP1YMR185W YPT10P38146 199 aa1.49□□□□□ -2.17
RTP1YMR185W PAU7P39545 55 aa1.49□□□□□ -2.17
RTP1YMR185W YIL163CP40448 117 aa1.49□□□□□ -2.17
RTP1YMR185W YJR015WP47090 510 aa1.49□□□□□ -2.17
RTP1YMR185W ABM1P47146 123 aa1.49□□□□□ -2.17
RTP1YMR185W HST4P53688 370 aa1.49□□□□□ -2.17
RTP1YMR185W YNR071CP53757 342 aa1.49□□□□□ -2.17
RTP1YMR185W ATG21Q02887 496 aa1.49□□□□□ -2.17
RTP1YMR185W YDR042CQ03205 200 aa1.49□□□□□ -2.17
RTP1YMR185W SCW10Q04951 389 aa1.49□□□□□ -2.17
RTP1YMR185W ARC18Q05933 178 aaKnown RBP1.49□□□□□ -2.17
RTP1YMR185W LIP2Q06005 328 aa1.49□□□□□ -2.17
RTP1YMR185W FIT2Q08906 153 aa1.49□□□□□ -2.17
RTP1YMR185W FSF1Q12029 327 aaKnown RBP1.49□□□□□ -2.17
RTP1YMR185W ATO3Q12359 275 aa1.49□□□□□ -2.17
RTP1YMR185W POM34Q12445 299 aa1.49□□□□□ -2.17
RTP1YMR185W MRPL31P14063 131 aaPredicted RBP1.48□□□□□ -2.17
RTP1YMR185W YCR023CP25351 611 aa1.48□□□□□ -2.17
RTP1YMR185W ZRT1P32804 376 aa1.48□□□□□ -2.17
RTP1YMR185W MRPL39P36533 70 aa1.48□□□□□ -2.17
RTP1YMR185W BDH1P39714 382 aa1.48□□□□□ -2.17
RTP1YMR185W PCL7P40186 285 aa1.48□□□□□ -2.17
RTP1YMR185W ATG4P53867 494 aa1.48□□□□□ -2.17
RTP1YMR185W SWT21P53873 357 aaPredicted RBP1.48□□□□□ -2.17
RTP1YMR185W HSK3P69852 69 aa1.48□□□□□ -2.17
RTP1YMR185W DYN2Q02647 92 aa1.48□□□□□ -2.17
RTP1YMR185W DPP1Q05521 289 aa1.48□□□□□ -2.17
RTP1YMR185W YDL218WQ07629 317 aa1.48□□□□□ -2.17
RTP1YMR185W YOR376WQ08900 122 aa1.48□□□□□ -2.17
RTP1YMR185W RKI1Q12189 258 aa1.48□□□□□ -2.17
RTP1YMR185W YLR415CO13578 112 aa1.48□□□□□ -2.17
RTP1YMR185W RPL27BP0C2H7 136 aaKnown RBP1.48□□□□□ -2.17
RTP1YMR185W CUP2P15315 225 aa1.48□□□□□ -2.17
RTP1YMR185W YPS1P32329 569 aa1.48□□□□□ -2.17
RTP1YMR185W PAM17P36147 197 aa1.48□□□□□ -2.17
RTP1YMR185W YBR220CP38318 560 aa1.48□□□□□ -2.17
RTP1YMR185W TDA4P47153 279 aa1.48□□□□□ -2.17
RTP1YMR185W SUR7P54003 302 aa1.48□□□□□ -2.17
RTP1YMR185W MIX17Q03667 156 aa1.48□□□□□ -2.17
RTP1YMR185W MRS3P10566 314 aa1.47□□□□□ -2.17
RTP1YMR185W YCR022CP25620 114 aa1.47□□□□□ -2.17
RTP1YMR185W CWP1P28319 239 aa1.47□□□□□ -2.17
RTP1YMR185W YBL071CP38185 102 aa1.47□□□□□ -2.17
RTP1YMR185W SEC72P39742 193 aaKnown RBP1.47□□□□□ -2.17
RTP1YMR185W YNL200CP40165 246 aaKnown RBP1.47□□□□□ -2.17
RTP1YMR185W YNL198CP40166 100 aa1.47□□□□□ -2.17
RTP1YMR185W YPI1P43587 155 aa1.47□□□□□ -2.17
RTP1YMR185W YGR018CP53211 109 aa1.47□□□□□ -2.17
RTP1YMR185W CAB4P53332 305 aa1.47□□□□□ -2.17
RTP1YMR185W WSC2P53832 503 aa1.47□□□□□ -2.17
RTP1YMR185W POP3P53833 195 aaPredicted RBP1.47□□□□□ -2.17
RTP1YMR185W YPL257WQ08974 193 aa1.47□□□□□ -2.17
RTP1YMR185W NCE102Q12207 173 aaRIP-Chip data1.47□□□□□ -2.17not detected
RTP1YMR185W CPT1P17898 393 aa1.47□□□□□ -2.17
RTP1YMR185W MRPL20P22354 195 aaPredicted RBP1.47□□□□□ -2.17
RTP1YMR185W RPS2P25443 254 aaKnown RBP1.47□□□□□ -2.17
RTP1YMR185W MRPS5P33759 307 aa1.47□□□□□ -2.17
RTP1YMR185W PHD1P36093 366 aa1.47□□□□□ -2.17
RTP1YMR185W YPL073CP40323 161 aa1.47□□□□□ -2.17
RTP1YMR185W MGR2Q02889 113 aa1.47□□□□□ -2.17
RTP1YMR185W RAV2Q03956 351 aa1.47□□□□□ -2.17
RTP1YMR185W POS5Q06892 414 aa1.47□□□□□ -2.17
RTP1YMR185W TIM18Q08749 192 aa1.47□□□□□ -2.17
RTP1YMR185W DAP1Q12091 152 aa1.47□□□□□ -2.17
RTP1YMR185W SLO1Q3E784 85 aa1.47□□□□□ -2.17
RTP1YMR185W YMR316C-AI2HB70 103 aa1.46□□□□□ -2.17
RTP1YMR185W RPL23AP0CX41 137 aaKnown RBP1.46□□□□□ -2.17
RTP1YMR185W RPL23BP0CX42 137 aaKnown RBP1.46□□□□□ -2.17
RTP1YMR185W SOR1P35497 357 aaKnown RBP1.46□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 70.2 ms