RNA–Protein interactions for RNA: YMR183C

SSO2, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO2, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO2YMR183C MRPS9P38120 278 aa2.69□□□□□ -1.98
SSO2YMR183C TRS20P38334 175 aa2.69□□□□□ -1.98
SSO2YMR183C YEL028WP39989 153 aa2.69□□□□□ -1.98
SSO2YMR183C SPC25P40014 221 aa2.69□□□□□ -1.98
SSO2YMR183C RGI1P40043 161 aaPredicted RBP2.69□□□□□ -1.98
SSO2YMR183C EST3Q03096 181 aa2.69□□□□□ -1.98
SSO2YMR183C LDB18Q07887 179 aa2.69□□□□□ -1.98
SSO2YMR183C FSF1Q12029 327 aaKnown RBP2.69□□□□□ -1.98
SSO2YMR183C YLR118CQ12354 227 aa2.69□□□□□ -1.98
SSO2YMR183C YLR099W-AQ3E798 87 aa2.69□□□□□ -1.98
SSO2YMR183C GCN2P15442 1659 aa2.69□□□□□ -1.98
SSO2YMR183C RRP5Q05022 1729 aaKnown RBP2.68□□□□□ -1.98
SSO2YMR183C HYM1P32464 399 aa2.68□□□□□ -1.98
SSO2YMR183C SHB17P36136 271 aaKnown RBP2.68□□□□□ -1.98
SSO2YMR183C ALB1P47019 175 aaPredicted RBP2.68□□□□□ -1.98
SSO2YMR183C YGR017WP53210 297 aa2.68□□□□□ -1.98
SSO2YMR183C MPC3P53311 146 aa2.68□□□□□ -1.98
SSO2YMR183C BUD25P85052 153 aa2.68□□□□□ -1.98
SSO2YMR183C AIM11P87275 137 aa2.68□□□□□ -1.98
SSO2YMR183C YDR114CQ04597 100 aa2.68□□□□□ -1.98
SSO2YMR183C YMR253CQ04835 414 aa2.68□□□□□ -1.98
SSO2YMR183C YOR289WQ12012 251 aaPredicted RBP2.68□□□□□ -1.98
SSO2YMR183C ATP20Q12233 115 aa2.68□□□□□ -1.98
SSO2YMR183C PAM17P36147 197 aa2.67□□□□□ -1.98
SSO2YMR183C YHR180WP38868 163 aa2.67□□□□□ -1.98
SSO2YMR183C YER135CP40082 130 aa2.67□□□□□ -1.98
SSO2YMR183C SFT1P43682 97 aa2.67□□□□□ -1.98
SSO2YMR183C SHH3Q04487 196 aa2.67□□□□□ -1.98
SSO2YMR183C TOM1Q03280 3268 aa2.67□□□□□ -1.98
SSO2YMR183C TY3B-IQ7LHG5 1498 aaKnown RBP2.66□□□□□ -1.98
SSO2YMR183C HSP12P22943 109 aaKnown RBP2.66□□□□□ -1.98
SSO2YMR183C FZF1P32805 299 aa2.66□□□□□ -1.98
SSO2YMR183C YRA2P36036 203 aaKnown RBP RIP-Chip data2.66□□□□□ -1.98not detected
SSO2YMR183C RPL14AP36105 138 aaKnown RBP2.66□□□□□ -1.98
SSO2YMR183C RPL14BP38754 138 aaKnown RBP2.66□□□□□ -1.98
SSO2YMR183C RIO2P40160 425 aaKnown RBP2.66□□□□□ -1.98
SSO2YMR183C YIL059CP40520 121 aa2.66□□□□□ -1.98
SSO2YMR183C PIR5P46999 287 aa2.66□□□□□ -1.98
SSO2YMR183C YNR062CP53748 327 aa2.66□□□□□ -1.98
SSO2YMR183C YNR064CP53750 290 aa2.66□□□□□ -1.98
SSO2YMR183C AIM36Q03798 255 aa2.66□□□□□ -1.98
SSO2YMR183C NUP192P47054 1683 aa2.66□□□□□ -1.98
SSO2YMR183C YET1P35723 206 aa2.65□□□□□ -1.99
SSO2YMR183C RRT1P38192 103 aa2.65□□□□□ -1.99
SSO2YMR183C TVP23P38962 199 aa2.65□□□□□ -1.99
SSO2YMR183C DOC1P53068 250 aa2.65□□□□□ -1.99
SSO2YMR183C EMC4P53073 190 aa2.65□□□□□ -1.99
SSO2YMR183C YNR077CP53758 84 aa2.65□□□□□ -1.99
SSO2YMR183C RPL33BP41056 107 aaKnown RBP2.64□□□□□ -1.99
SSO2YMR183C LIP1Q03579 150 aa2.64□□□□□ -1.99
SSO2YMR183C YDR102CQ03864 110 aa2.64□□□□□ -1.99
SSO2YMR183C ANT1Q06497 328 aa2.64□□□□□ -1.99
SSO2YMR183C RRT7Q07829 113 aa2.64□□□□□ -1.99
SSO2YMR183C IRC23Q08416 157 aa2.64□□□□□ -1.99
SSO2YMR183C FYV7Q12247 151 aa2.64□□□□□ -1.99
SSO2YMR183C URB1P34241 1764 aaKnown RBP2.64□□□□□ -1.99
SSO2YMR183C DDI2P0CH63 225 aa2.63□□□□□ -1.99
SSO2YMR183C DDI3P0CH64 225 aa2.63□□□□□ -1.99
SSO2YMR183C GPA2P10823 449 aa2.63□□□□□ -1.99
SSO2YMR183C NMT1P14743 455 aa2.63□□□□□ -1.99
SSO2YMR183C YCR101CP25607 182 aa2.63□□□□□ -1.99
SSO2YMR183C YBL010CP32788 280 aa2.63□□□□□ -1.99
SSO2YMR183C LHP1P33399 275 aaKnown RBP2.63□□□□□ -1.99
SSO2YMR183C YIR035CP40579 254 aa2.63□□□□□ -1.99
SSO2YMR183C GEP7P53171 287 aa2.63□□□□□ -1.99
SSO2YMR183C ELC1Q03071 99 aa2.63□□□□□ -1.99
SSO2YMR183C RIM9Q04734 239 aa2.63□□□□□ -1.99
SSO2YMR183C YPL225WQ08971 146 aaKnown RBP2.63□□□□□ -1.99
SSO2YMR183C RPS23AP0CX29 145 aaKnown RBP2.62□□□□□ -1.99
SSO2YMR183C RPS23BP0CX30 145 aa2.62□□□□□ -1.99
SSO2YMR183C DDR48P18899 430 aaKnown RBP2.62□□□□□ -1.99
SSO2YMR183C SCM4P32564 187 aa2.62□□□□□ -1.99
SSO2YMR183C YKR070WP36151 352 aaKnown RBP2.62□□□□□ -1.99
SSO2YMR183C ETR1P38071 380 aa2.62□□□□□ -1.99
SSO2YMR183C YEL073CP39974 107 aa2.62□□□□□ -1.99
SSO2YMR183C YNL217WP40152 326 aa2.62□□□□□ -1.99
SSO2YMR183C CIS3P47001 227 aa2.62□□□□□ -1.99
SSO2YMR183C GRX5Q02784 150 aa2.62□□□□□ -1.99
SSO2YMR183C FEX1Q08913 375 aa2.62□□□□□ -1.99
SSO2YMR183C FEX2Q08991 375 aa2.62□□□□□ -1.99
SSO2YMR183C ATG40Q99325 256 aa2.62□□□□□ -1.99
SSO2YMR183C ADK1P07170 222 aaKnown RBP2.61□□□□□ -1.99
SSO2YMR183C YER084WP40057 128 aa2.61□□□□□ -1.99
SSO2YMR183C SAY1P53324 424 aa2.61□□□□□ -1.99
SSO2YMR183C TMA23Q03525 211 aa2.61□□□□□ -1.99
SSO2YMR183C MEU1Q07938 337 aaKnown RBP RIP-Chip data2.61□□□□□ -1.99not detected
SSO2YMR183C UIP4Q08926 304 aa2.61□□□□□ -1.99
SSO2YMR183C ROM2P51862 1356 aaKnown RBP2.61□□□□□ -1.99
SSO2YMR183C YRF1-3P0CX14 1859 aa2.6□□□□□ -1.99
SSO2YMR183C YRF1-7P0CX15 1859 aa2.6□□□□□ -1.99
SSO2YMR183C YRF1-6P53819 1859 aa2.6□□□□□ -1.99
SSO2YMR183C FKS3Q04952 1785 aa2.6□□□□□ -1.99
SSO2YMR183C MRS4P23500 304 aa2.6□□□□□ -1.99
SSO2YMR183C PHS1P40857 217 aa2.6□□□□□ -1.99
SSO2YMR183C YJL027CP47063 138 aaPredicted RBP2.6□□□□□ -1.99
SSO2YMR183C RPS12P48589 143 aaKnown RBP2.6□□□□□ -1.99
SSO2YMR183C SPG1P50088 95 aa2.6□□□□□ -1.99
SSO2YMR183C SAE3P89114 91 aa2.6□□□□□ -1.99
SSO2YMR183C CWC27Q02770 301 aa2.6□□□□□ -1.99
SSO2YMR183C FCF2Q12035 217 aaPredicted RBP2.6□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 68.4 ms