RNA–Protein interactions for RNA: YML031W

NDC1, Transcript of Subunit of the transmembrane ring of the nuclear pore complex (NPC), yeast

Gene NDC1, Length 1,968 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NDC1	YML031W	RPL9B	P51401	191 aa	Known RBP	4.1	□□□□□ -1.75
NDC1	YML031W	PKR1	Q03880	122 aa	Known RBP	4.1	□□□□□ -1.75
NDC1	YML031W	RPL31A	P0C2H8	113 aa	Known RBP	4.09	□□□□□ -1.75
NDC1	YML031W	RPL31B	P0C2H9	113 aa	Known RBP	4.09	□□□□□ -1.75
NDC1	YML031W	YBL059W	P34224	193 aa		4.09	□□□□□ -1.75
NDC1	YML031W	DAD2	P36162	133 aa		4.09	□□□□□ -1.75
NDC1	YML031W	COX15	P40086	486 aa		4.09	□□□□□ -1.75
NDC1	YML031W	WWM1	P43582	211 aa	Known RBP	4.09	□□□□□ -1.75
NDC1	YML031W	YGR050C	P53231	118 aa		4.09	□□□□□ -1.75
NDC1	YML031W	YMR007W	Q03675	126 aa		4.09	□□□□□ -1.75
NDC1	YML031W	NAT3	Q06504	195 aa		4.09	□□□□□ -1.75
NDC1	YML031W	NAT5	Q08689	176 aa		4.09	□□□□□ -1.75
NDC1	YML031W	FCY2	P17064	533 aa		4.09	□□□□□ -1.76
NDC1	YML031W	SPS18	P32572	300 aa		4.09	□□□□□ -1.76
NDC1	YML031W	YUH1	P35127	236 aa		4.09	□□□□□ -1.76
NDC1	YML031W	PRM5	P40476	318 aa		4.09	□□□□□ -1.76
NDC1	YML031W	CRH1	P53301	507 aa		4.09	□□□□□ -1.76
NDC1	YML031W	ARR3	Q06598	404 aa		4.09	□□□□□ -1.76
NDC1	YML031W	YOR292C	Q08743	309 aa		4.09	□□□□□ -1.76
NDC1	YML031W	PRM3	Q08931	133 aa		4.09	□□□□□ -1.76
NDC1	YML031W	SWT1	Q12104	458 aa		4.09	□□□□□ -1.76
NDC1	YML031W	TMA7	Q3E764	64 aa	Known RBP	4.09	□□□□□ -1.76
NDC1	YML031W	YOS1	Q3E834	85 aa		4.09	□□□□□ -1.76
NDC1	YML031W	RPS22A	P0C0W1	130 aa	Known RBP	4.08	□□□□□ -1.76
NDC1	YML031W	GPI2	P46961	280 aa		4.08	□□□□□ -1.76
NDC1	YML031W	DPB4	Q04603	196 aa	Known RBP	4.08	□□□□□ -1.76
NDC1	YML031W	MCH1	Q07376	486 aa		4.08	□□□□□ -1.76
NDC1	YML031W	YFH1	Q07540	174 aa		4.08	□□□□□ -1.76
NDC1	YML031W	LDS2	Q08218	356 aa		4.08	□□□□□ -1.76
NDC1	YML031W	REC104	P33323	182 aa		4.07	□□□□□ -1.76
NDC1	YML031W	PCL7	P40186	285 aa		4.07	□□□□□ -1.76
NDC1	YML031W	CAB4	P53332	305 aa		4.07	□□□□□ -1.76
NDC1	YML031W	IZH1	Q03419	316 aa		4.07	□□□□□ -1.76
NDC1	YML031W	LPP1	Q04396	274 aa		4.07	□□□□□ -1.76
NDC1	YML031W	YLR281C	Q05863	155 aa		4.07	□□□□□ -1.76
NDC1	YML031W	UTR5	P32630	166 aa		4.07	□□□□□ -1.76
NDC1	YML031W	RPB11	P38902	120 aa		4.07	□□□□□ -1.76
NDC1	YML031W	SRP14	P38985	146 aa		4.07	□□□□□ -1.76
NDC1	YML031W	TOS8	P53147	276 aa		4.07	□□□□□ -1.76
NDC1	YML031W	LOA1	Q06508	300 aa		4.07	□□□□□ -1.76
NDC1	YML031W	YOR105W	Q08504	108 aa		4.07	□□□□□ -1.76
NDC1	YML031W	POC4	Q12245	148 aa	Predicted RBP	4.07	□□□□□ -1.76
NDC1	YML031W	HAP3	P13434	144 aa		4.06	□□□□□ -1.76
NDC1	YML031W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
NDC1	YML031W	DER1	P38307	211 aa		4.06	□□□□□ -1.76
NDC1	YML031W	YER134C	P40081	178 aa		4.06	□□□□□ -1.76
NDC1	YML031W	GPP2	P40106	250 aa	Known RBP	4.06	□□□□□ -1.76
NDC1	YML031W	YHP1	Q04116	353 aa		4.06	□□□□□ -1.76
NDC1	YML031W	NDE2	Q07500	545 aa		4.06	□□□□□ -1.76
NDC1	YML031W	SMT3	Q12306	101 aa	Known RBP	4.06	□□□□□ -1.76
NDC1	YML031W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
NDC1	YML031W	MDM10	P18409	493 aa		4.05	□□□□□ -1.76
NDC1	YML031W	MIX23	P38162	196 aa		4.05	□□□□□ -1.76
NDC1	YML031W	YIL163C	P40448	117 aa		4.05	□□□□□ -1.76
NDC1	YML031W	ARP3	P47117	449 aa	Known RBP	4.05	□□□□□ -1.76
NDC1	YML031W	CWC27	Q02770	301 aa		4.05	□□□□□ -1.76
NDC1	YML031W	YML122C	Q03207	126 aa		4.05	□□□□□ -1.76
NDC1	YML031W	GEP3	Q08622	556 aa		4.05	□□□□□ -1.76
NDC1	YML031W	TPT1	Q12272	230 aa	Known RBP	4.05	□□□□□ -1.76
NDC1	YML031W	COX2	P00410	251 aa		4.05	□□□□□ -1.76
NDC1	YML031W	RNA15	P25299	296 aa	Predicted RBP	4.05	□□□□□ -1.76
NDC1	YML031W	HMX1	P32339	317 aa		4.05	□□□□□ -1.76
NDC1	YML031W	SRP21	P32342	167 aa		4.05	□□□□□ -1.76
NDC1	YML031W	AUA1	P32450	94 aa		4.05	□□□□□ -1.76
NDC1	YML031W	PAU16	P35994	123 aa		4.05	□□□□□ -1.76
NDC1	YML031W	ELF1	P36053	145 aa		4.05	□□□□□ -1.76
NDC1	YML031W	PAM17	P36147	197 aa		4.05	□□□□□ -1.76
NDC1	YML031W	AME1	P38313	324 aa		4.05	□□□□□ -1.76
NDC1	YML031W	DOG1	P38774	246 aa		4.05	□□□□□ -1.76
NDC1	YML031W	CYB5	P40312	120 aa		4.05	□□□□□ -1.76
NDC1	YML031W	DFG10	P40526	253 aa		4.05	□□□□□ -1.76
NDC1	YML031W	SHH3	Q04487	196 aa		4.05	□□□□□ -1.76
NDC1	YML031W	TVP18	Q04767	167 aa		4.05	□□□□□ -1.76
NDC1	YML031W	YDL157C	Q12082	118 aa		4.05	□□□□□ -1.76
NDC1	YML031W	YDR215C	Q12240	137 aa		4.05	□□□□□ -1.76
NDC1	YML031W	POM34	Q12445	299 aa		4.05	□□□□□ -1.76
NDC1	YML031W	BOL1	Q3E793	110 aa		4.05	□□□□□ -1.76
NDC1	YML031W	YCR024C-B	Q3E7Z8	88 aa		4.05	□□□□□ -1.76
NDC1	YML031W	PHD1	P36093	366 aa		4.04	□□□□□ -1.76
NDC1	YML031W	YJL163C	P46996	555 aa		4.04	□□□□□ -1.76
NDC1	YML031W	YJL028W	P47062	111 aa		4.04	□□□□□ -1.76
NDC1	YML031W	DSK2	P48510	373 aa		4.04	□□□□□ -1.76
NDC1	YML031W	GRH1	Q04410	372 aa	Known RBP	4.04	□□□□□ -1.76
NDC1	YML031W	PAU23	Q07987	124 aa		4.04	□□□□□ -1.76
NDC1	YML031W	HRD1	Q08109	551 aa		4.04	□□□□□ -1.76
NDC1	YML031W	PAU17	Q12370	124 aa		4.04	□□□□□ -1.76
NDC1	YML031W	SOD1	P00445	154 aa	Known RBP	4.03	□□□□□ -1.76
NDC1	YML031W	YBR184W	P38299	523 aa		4.03	□□□□□ -1.76
NDC1	YML031W	YJR015W	P47090	510 aa		4.03	□□□□□ -1.76
NDC1	YML031W	CPD1	P53314	239 aa		4.03	□□□□□ -1.76
NDC1	YML031W	BOR1	P53838	576 aa		4.03	□□□□□ -1.76
NDC1	YML031W	MSC3	Q05812	728 aa		4.03	□□□□□ -1.76
NDC1	YML031W	CUP2	P15315	225 aa		4.03	□□□□□ -1.76
NDC1	YML031W	YMR31	P19955	123 aa		4.03	□□□□□ -1.76
NDC1	YML031W	ROX3	P25046	220 aa		4.03	□□□□□ -1.76
NDC1	YML031W	YKR045C	P36138	183 aa		4.03	□□□□□ -1.76
NDC1	YML031W	YBR090C	P38253	122 aa		4.03	□□□□□ -1.76
NDC1	YML031W	PRE5	P40302	234 aa	Known RBP	4.03	□□□□□ -1.76
NDC1	YML031W	MRPL49	P40858	161 aa	Predicted RBP	4.03	□□□□□ -1.76
NDC1	YML031W	DYN2	Q02647	92 aa		4.03	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms