RNA–Protein interactions for RNA: YLR411W

CTR3, Transcript of High-affinity copper transporter of the plasma membrane, yeast

Gene CTR3, Length 726 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CTR3	YLR411W	DFG10	P40526	253 aa		4.28	□□□□□ -1.72
CTR3	YLR411W	RPL9B	P51401	191 aa	Known RBP	4.28	□□□□□ -1.72
CTR3	YLR411W	UBC13	P52490	153 aa		4.28	□□□□□ -1.72
CTR3	YLR411W	YIP1	P53039	248 aa		4.28	□□□□□ -1.72
CTR3	YLR411W	YGL118C	P53132	145 aa		4.28	□□□□□ -1.72
CTR3	YLR411W	YMR007W	Q03675	126 aa		4.28	□□□□□ -1.72
CTR3	YLR411W	ECM18	Q04623	453 aa		4.28	□□□□□ -1.72
CTR3	YLR411W	RRS1	Q08746	203 aa	Known RBP	4.28	□□□□□ -1.72
CTR3	YLR411W	FIT3	Q08907	204 aa		4.28	□□□□□ -1.72
CTR3	YLR411W	YDL180W	Q12301	547 aa		4.28	□□□□□ -1.72
CTR3	YLR411W	UTR5	P32630	166 aa		4.27	□□□□□ -1.73
CTR3	YLR411W	TEM1	P38987	245 aa		4.27	□□□□□ -1.73
CTR3	YLR411W	HIT1	P46973	164 aa		4.27	□□□□□ -1.73
CTR3	YLR411W	SSU72	P53538	206 aa	Predicted RBP	4.27	□□□□□ -1.73
CTR3	YLR411W	HSK3	P69852	69 aa		4.27	□□□□□ -1.73
CTR3	YLR411W	STD1	Q02794	444 aa		4.27	□□□□□ -1.73
CTR3	YLR411W	MIX14	Q04341	121 aa		4.27	□□□□□ -1.73
CTR3	YLR411W	SHH3	Q04487	196 aa		4.27	□□□□□ -1.73
CTR3	YLR411W	YOL118C	Q08259	102 aa		4.27	□□□□□ -1.73
CTR3	YLR411W	YPL162C	Q12042	273 aa		4.27	□□□□□ -1.73
CTR3	YLR411W	YOR192C-C	Q3E736	78 aa		4.27	□□□□□ -1.73
CTR3	YLR411W	CCH1	P50077	2039 aa		4.26	□□□□□ -1.73
CTR3	YLR411W	SOD1	P00445	154 aa	Known RBP	4.26	□□□□□ -1.73
CTR3	YLR411W	RAD23	P32628	398 aa	Known RBP	4.26	□□□□□ -1.73
CTR3	YLR411W	YHR173C	P38864	112 aa		4.26	□□□□□ -1.73
CTR3	YLR411W	PRE5	P40302	234 aa	Known RBP	4.26	□□□□□ -1.73
CTR3	YLR411W	YFL067W	P43537	175 aa		4.26	□□□□□ -1.73
CTR3	YLR411W	ECO1	P43605	281 aa		4.26	□□□□□ -1.73
CTR3	YLR411W	YJR015W	P47090	510 aa		4.26	□□□□□ -1.73
CTR3	YLR411W	LPP1	Q04396	274 aa		4.26	□□□□□ -1.73
CTR3	YLR411W	NAT5	Q08689	176 aa		4.26	□□□□□ -1.73
CTR3	YLR411W	YDL157C	Q12082	118 aa		4.26	□□□□□ -1.73
CTR3	YLR411W	TPT1	Q12272	230 aa	Known RBP	4.26	□□□□□ -1.73
CTR3	YLR411W	CYC3	P06182	269 aa		4.25	□□□□□ -1.73
CTR3	YLR411W	HSP12	P22943	109 aa	Known RBP	4.25	□□□□□ -1.73
CTR3	YLR411W	MST28	P39552	234 aa		4.25	□□□□□ -1.73
CTR3	YLR411W	YJL118W	P47022	219 aa		4.25	□□□□□ -1.73
CTR3	YLR411W	RPL21A	Q02753	160 aa	Known RBP	4.25	□□□□□ -1.73
CTR3	YLR411W	GIM5	Q04493	163 aa		4.25	□□□□□ -1.73
CTR3	YLR411W	YLR050C	Q12155	161 aa	Known RBP	4.25	□□□□□ -1.73
CTR3	YLR411W	POC4	Q12245	148 aa	Predicted RBP	4.25	□□□□□ -1.73
CTR3	YLR411W	RPL21B	Q12672	160 aa	Known RBP	4.25	□□□□□ -1.73
CTR3	YLR411W	MRP49	P32388	137 aa		4.24	□□□□□ -1.73
CTR3	YLR411W	PRS4	P38063	326 aa	Predicted RBP	4.24	□□□□□ -1.73
CTR3	YLR411W	YER084W	P40057	128 aa		4.24	□□□□□ -1.73
CTR3	YLR411W	YPS6	P40583	537 aa		4.24	□□□□□ -1.73
CTR3	YLR411W	DSK2	P48510	373 aa		4.24	□□□□□ -1.73
CTR3	YLR411W	YDR366C	P87287	132 aa		4.24	□□□□□ -1.73
CTR3	YLR411W	MRX11	Q03079	207 aa		4.24	□□□□□ -1.73
CTR3	YLR411W	PBA1	Q05778	276 aa		4.24	□□□□□ -1.73
CTR3	YLR411W	YCR024C-B	Q3E7Z8	88 aa		4.24	□□□□□ -1.73
CTR3	YLR411W	TAO3	P40468	2376 aa		4.24	□□□□□ -1.73
CTR3	YLR411W	FAB1	P34756	2278 aa		4.23	□□□□□ -1.73
CTR3	YLR411W	COX2	P00410	251 aa		4.23	□□□□□ -1.73
CTR3	YLR411W	HTB1	P02293	131 aa	Known RBP	4.23	□□□□□ -1.73
CTR3	YLR411W	HTB2	P02294	131 aa		4.23	□□□□□ -1.73
CTR3	YLR411W	PIS1	P06197	220 aa	Known RBP	4.23	□□□□□ -1.73
CTR3	YLR411W	RPI1	P23250	407 aa	Known RBP	4.23	□□□□□ -1.73
CTR3	YLR411W	CSH1	P38287	376 aa		4.23	□□□□□ -1.73
CTR3	YLR411W	YER134C	P40081	178 aa		4.23	□□□□□ -1.73
CTR3	YLR411W	HAC1	P41546	238 aa		4.23	□□□□□ -1.73
CTR3	YLR411W	YGL230C	P53074	147 aa		4.23	□□□□□ -1.73
CTR3	YLR411W	THG1	P53215	237 aa	Known RBP	4.23	□□□□□ -1.73
CTR3	YLR411W	UPS3	Q04006	179 aa		4.23	□□□□□ -1.73
CTR3	YLR411W	TIM18	Q08749	192 aa		4.23	□□□□□ -1.73
CTR3	YLR411W	GEP5	Q12393	293 aa		4.23	□□□□□ -1.73
CTR3	YLR411W	Q0144	Q9ZZW2	109 aa		4.23	□□□□□ -1.73
CTR3	YLR411W	HHF1	P02309	103 aa	Known RBP	4.22	□□□□□ -1.73
CTR3	YLR411W	YPR170W-B	P0C5R9	85 aa		4.22	□□□□□ -1.73
CTR3	YLR411W	RPL12A	P0CX53	165 aa	Known RBP	4.22	□□□□□ -1.73
CTR3	YLR411W	RPL12B	P0CX54	165 aa		4.22	□□□□□ -1.73
CTR3	YLR411W	GSP1	P32835	219 aa	Known RBP	4.22	□□□□□ -1.73
CTR3	YLR411W	GSP2	P32836	220 aa	Known RBP	4.22	□□□□□ -1.73
CTR3	YLR411W	MRPS5	P33759	307 aa		4.22	□□□□□ -1.73
CTR3	YLR411W	SEC72	P39742	193 aa	Known RBP	4.22	□□□□□ -1.73
CTR3	YLR411W	YJL028W	P47062	111 aa		4.22	□□□□□ -1.73
CTR3	YLR411W	SIP18	P50263	79 aa		4.22	□□□□□ -1.73
CTR3	YLR411W	DYN2	Q02647	92 aa		4.22	□□□□□ -1.73
CTR3	YLR411W	YDR209C	Q03480	137 aa		4.22	□□□□□ -1.73
CTR3	YLR411W	YML079W	Q03629	201 aa		4.22	□□□□□ -1.73
CTR3	YLR411W	HTL1	Q9URQ5	78 aa		4.22	□□□□□ -1.73
CTR3	YLR411W	MRS1	P07266	363 aa		4.21	□□□□□ -1.74
CTR3	YLR411W	RPL35A	P0CX84	120 aa	Known RBP	4.21	□□□□□ -1.74
CTR3	YLR411W	RPL35B	P0CX85	120 aa	Known RBP	4.21	□□□□□ -1.74
CTR3	YLR411W	SEC11	P15367	167 aa		4.21	□□□□□ -1.74
CTR3	YLR411W	PRE1	P22141	198 aa	Known RBP	4.21	□□□□□ -1.74
CTR3	YLR411W	ZRT1	P32804	376 aa		4.21	□□□□□ -1.74
CTR3	YLR411W	SOR1	P35497	357 aa	Known RBP	4.21	□□□□□ -1.74
CTR3	YLR411W	PAU7	P39545	55 aa		4.21	□□□□□ -1.74
CTR3	YLR411W	YIL163C	P40448	117 aa		4.21	□□□□□ -1.74
CTR3	YLR411W	CIN5	P40917	295 aa		4.21	□□□□□ -1.74
CTR3	YLR411W	GON7	P46984	123 aa		4.21	□□□□□ -1.74
CTR3	YLR411W	MIC26	P50087	233 aa		4.21	□□□□□ -1.74
CTR3	YLR411W	BRP1	P53194	125 aa		4.21	□□□□□ -1.74
CTR3	YLR411W	YGR017W	P53210	297 aa		4.21	□□□□□ -1.74
CTR3	YLR411W	NRM1	P53718	249 aa		4.21	□□□□□ -1.74
CTR3	YLR411W	GRH1	Q04410	372 aa	Known RBP	4.21	□□□□□ -1.74
CTR3	YLR411W	RAF1	Q06891	181 aa		4.21	□□□□□ -1.74
CTR3	YLR411W	SOR2	Q07786	357 aa		4.21	□□□□□ -1.74
CTR3	YLR411W	CSM4	Q08955	156 aa		4.21	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 31.3 ms