RNA–Protein interactions for RNA: YLR276C

DBP9, Transcript of DEAD-box protein required for 27S rRNA processing, yeast

Gene DBP9, Length 1,785 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBP9	YLR276C	XBP1	P40489	647 aa		4.76	□□□□□ -1.65
DBP9	YLR276C	YNR048W	P53740	393 aa		4.76	□□□□□ -1.65
DBP9	YLR276C	BET5	Q03630	159 aa		4.76	□□□□□ -1.65
DBP9	YLR276C	YPR011C	Q12251	326 aa		4.76	□□□□□ -1.65
DBP9	YLR276C	YLL053C	P0CD98	152 aa		4.75	□□□□□ -1.65
DBP9	YLR276C	MDH2	P22133	377 aa		4.75	□□□□□ -1.65
DBP9	YLR276C	MRPL20	P22354	195 aa	Predicted RBP	4.75	□□□□□ -1.65
DBP9	YLR276C	YBR090C	P38253	122 aa		4.75	□□□□□ -1.65
DBP9	YLR276C	YGP1	P38616	354 aa	Known RBP	4.75	□□□□□ -1.65
DBP9	YLR276C	SWT21	P53873	357 aa	Predicted RBP	4.75	□□□□□ -1.65
DBP9	YLR276C	YML079W	Q03629	201 aa		4.75	□□□□□ -1.65
DBP9	YLR276C	LPP1	Q04396	274 aa		4.75	□□□□□ -1.65
DBP9	YLR276C	LIP2	Q06005	328 aa		4.75	□□□□□ -1.65
DBP9	YLR276C	YOR105W	Q08504	108 aa		4.75	□□□□□ -1.65
DBP9	YLR276C	PRP46	Q12417	451 aa	Predicted RBP	4.75	□□□□□ -1.65
DBP9	YLR276C	MSI1	P13712	422 aa		4.74	□□□□□ -1.65
DBP9	YLR276C	IML3	P38265	245 aa		4.74	□□□□□ -1.65
DBP9	YLR276C	YAR068W	P39564	161 aa		4.74	□□□□□ -1.65
DBP9	YLR276C	GPI2	P46961	280 aa		4.74	□□□□□ -1.65
DBP9	YLR276C	MIC27	P50945	234 aa		4.74	□□□□□ -1.65
DBP9	YLR276C	AIM34	Q03673	198 aa		4.74	□□□□□ -1.65
DBP9	YLR276C	TAD3	Q9URQ3	322 aa		4.74	□□□□□ -1.65
DBP9	YLR276C	KRE1	P17260	313 aa		4.73	□□□□□ -1.65
DBP9	YLR276C	SNF11	P38956	169 aa		4.73	□□□□□ -1.65
DBP9	YLR276C	VPS71	Q03433	280 aa		4.73	□□□□□ -1.65
DBP9	YLR276C	YLR296W	Q05898	108 aa		4.73	□□□□□ -1.65
DBP9	YLR276C	RPS22B	Q3E7Y3	130 aa	Known RBP	4.73	□□□□□ -1.65
DBP9	YLR276C	YDR157W	A0A023PZE8	133 aa		4.73	□□□□□ -1.65
DBP9	YLR276C	SOD1	P00445	154 aa	Known RBP	4.73	□□□□□ -1.65
DBP9	YLR276C	ARF1	P11076	181 aa	Known RBP	4.73	□□□□□ -1.65
DBP9	YLR276C	UBC5	P15732	148 aa		4.73	□□□□□ -1.65
DBP9	YLR276C	MXR2	P25566	168 aa		4.73	□□□□□ -1.65
DBP9	YLR276C	SRP21	P32342	167 aa		4.73	□□□□□ -1.65
DBP9	YLR276C	RPB7	P34087	171 aa		4.73	□□□□□ -1.65
DBP9	YLR276C	ECM15	P35195	104 aa		4.73	□□□□□ -1.65
DBP9	YLR276C	CRH1	P53301	507 aa		4.73	□□□□□ -1.65
DBP9	YLR276C	PIR3	Q03180	325 aa		4.73	□□□□□ -1.65
DBP9	YLR276C	HRT1	Q08273	121 aa		4.73	□□□□□ -1.65
DBP9	YLR276C	MSB2	P32334	1306 aa		4.72	□□□□□ -1.65
DBP9	YLR276C	LYS1	P38998	373 aa	RIP-Chip data	4.72	□□□□□ -1.65	not detected
DBP9	YLR276C	TIF34	P40217	347 aa	Known RBP	4.72	□□□□□ -1.65
DBP9	YLR276C	SIM1	P40472	476 aa		4.72	□□□□□ -1.65
DBP9	YLR276C	CWP2	P43497	92 aa		4.72	□□□□□ -1.65
DBP9	YLR276C	YGR039W	P53225	103 aa		4.72	□□□□□ -1.65
DBP9	YLR276C	SCW4	P53334	386 aa	Known RBP	4.72	□□□□□ -1.65
DBP9	YLR276C	YMR090W	Q04304	227 aa	Known RBP	4.72	□□□□□ -1.65
DBP9	YLR276C	YOR376W	Q08900	122 aa		4.72	□□□□□ -1.65
DBP9	YLR276C	PHO85	P17157	305 aa		4.71	□□□□□ -1.66
DBP9	YLR276C	CPT1	P17898	393 aa		4.71	□□□□□ -1.66
DBP9	YLR276C	YCR041W	P37265	110 aa		4.71	□□□□□ -1.66
DBP9	YLR276C	YNL200C	P40165	246 aa	Known RBP	4.71	□□□□□ -1.66
DBP9	YLR276C	EGT2	P42835	1041 aa		4.71	□□□□□ -1.66
DBP9	YLR276C	ARP3	P47117	449 aa	Known RBP	4.71	□□□□□ -1.66
DBP9	YLR276C	BRP1	P53194	125 aa		4.71	□□□□□ -1.66
DBP9	YLR276C	MSO1	P53604	210 aa	Known RBP	4.71	□□□□□ -1.66
DBP9	YLR276C	FCF1	Q05498	189 aa	Predicted RBP	4.71	□□□□□ -1.66
DBP9	YLR276C	YPQ1	Q12010	308 aa		4.71	□□□□□ -1.66
DBP9	YLR276C	YLR112W	Q12130	139 aa		4.71	□□□□□ -1.66
DBP9	YLR276C	CSR2	Q12734	1121 aa		4.71	□□□□□ -1.66
DBP9	YLR276C	UBA3	Q99344	299 aa		4.71	□□□□□ -1.66
DBP9	YLR276C	RPS22A	P0C0W1	130 aa	Known RBP	4.7	□□□□□ -1.66
DBP9	YLR276C	VMA11	P32842	164 aa		4.7	□□□□□ -1.66
DBP9	YLR276C	MRPS5	P33759	307 aa		4.7	□□□□□ -1.66
DBP9	YLR276C	HOT13	P36078	116 aa		4.7	□□□□□ -1.66
DBP9	YLR276C	YIL059C	P40520	121 aa		4.7	□□□□□ -1.66
DBP9	YLR276C	ALG13	P53178	202 aa		4.7	□□□□□ -1.66
DBP9	YLR276C	YKL023C-A	Q2V2P3	75 aa		4.7	□□□□□ -1.66
DBP9	YLR276C	HEM4	P06174	275 aa		4.7	□□□□□ -1.66
DBP9	YLR276C	CDC39	P25655	2108 aa	Known RBP	4.7	□□□□□ -1.66
DBP9	YLR276C	ERG2	P32352	222 aa		4.7	□□□□□ -1.66
DBP9	YLR276C	FRM2	P37261	193 aa		4.7	□□□□□ -1.66
DBP9	YLR276C	ECM34	P38728	170 aa		4.7	□□□□□ -1.66
DBP9	YLR276C	TIM17	P39515	158 aa		4.7	□□□□□ -1.66
DBP9	YLR276C	WSC2	P53832	503 aa		4.7	□□□□□ -1.66
DBP9	YLR276C	AYT1	Q12226	474 aa		4.7	□□□□□ -1.66
DBP9	YLR276C	OM14	P38325	134 aa		4.69	□□□□□ -1.66
DBP9	YLR276C	CDH1	P53197	566 aa		4.69	□□□□□ -1.66
DBP9	YLR276C	FCY1	Q12178	158 aa		4.69	□□□□□ -1.66
DBP9	YLR276C	SMT3	Q12306	101 aa	Known RBP	4.69	□□□□□ -1.66
DBP9	YLR276C	YDR119W-A	Q2V2P9	66 aa		4.69	□□□□□ -1.66
DBP9	YLR276C	CTA1	P15202	515 aa		4.68	□□□□□ -1.66
DBP9	YLR276C	YIL163C	P40448	117 aa		4.68	□□□□□ -1.66
DBP9	YLR276C	YGL118C	P53132	145 aa		4.68	□□□□□ -1.66
DBP9	YLR276C	CPD1	P53314	239 aa		4.68	□□□□□ -1.66
DBP9	YLR276C	POP3	P53833	195 aa	Predicted RBP	4.68	□□□□□ -1.66
DBP9	YLR276C	MIX17	Q03667	156 aa		4.68	□□□□□ -1.66
DBP9	YLR276C	YDL211C	Q12121	372 aa		4.68	□□□□□ -1.66
DBP9	YLR276C	NHP2	P32495	156 aa	Predicted RBP	4.68	□□□□□ -1.66
DBP9	YLR276C	YBL059W	P34224	193 aa		4.68	□□□□□ -1.66
DBP9	YLR276C	KTI12	P34253	313 aa	Known RBP	4.68	□□□□□ -1.66
DBP9	YLR276C	TDA4	P47153	279 aa		4.68	□□□□□ -1.66
DBP9	YLR276C	ATP23	P53722	227 aa		4.68	□□□□□ -1.66
DBP9	YLR276C	YLR152C	P54072	576 aa		4.68	□□□□□ -1.66
DBP9	YLR276C	YAL063C-A	Q3E791	96 aa		4.68	□□□□□ -1.66
DBP9	YLR276C	MID2	P36027	376 aa		4.67	□□□□□ -1.66
DBP9	YLR276C	YGR269W	P40326	108 aa		4.67	□□□□□ -1.66
DBP9	YLR276C	DFG10	P40526	253 aa		4.67	□□□□□ -1.66
DBP9	YLR276C	BRR6	P53062	197 aa		4.67	□□□□□ -1.66
DBP9	YLR276C	YNR064C	P53750	290 aa		4.67	□□□□□ -1.66
DBP9	YLR276C	YNL234W	P53857	426 aa		4.67	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 57.4 ms