RNA–Protein interactions for RNA: YLR066W

SPC3, Transcript of Subunit of signal peptidase complex, yeastyeast

Gene SPC3, Length 555 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC3YLR066W DDR48P18899 430 aaKnown RBP2.12□□□□□ -2.07
SPC3YLR066W PRE1P22141 198 aaKnown RBP2.12□□□□□ -2.07
SPC3YLR066W SPT14P32363 452 aa2.12□□□□□ -2.07
SPC3YLR066W GLC8P41818 229 aa2.12□□□□□ -2.07
SPC3YLR066W RFU1Q08003 200 aa2.12□□□□□ -2.07
SPC3YLR066W SHB17P36136 271 aaKnown RBP2.11□□□□□ -2.07
SPC3YLR066W YAP3P38749 330 aa2.11□□□□□ -2.07
SPC3YLR066W RBL2P48606 106 aaKnown RBP2.11□□□□□ -2.07
SPC3YLR066W RCF2P53721 224 aa2.11□□□□□ -2.07
SPC3YLR066W YMR007WQ03675 126 aa2.11□□□□□ -2.07
SPC3YLR066W FMN1Q03778 218 aa2.11□□□□□ -2.07
SPC3YLR066W FIT1Q04433 528 aa2.11□□□□□ -2.07
SPC3YLR066W AVO2Q04749 426 aa2.11□□□□□ -2.07
SPC3YLR066W THO2P53552 1597 aaKnown RBP2.1□□□□□ -2.07
SPC3YLR066W BUD4P47136 1447 aa2.1□□□□□ -2.07
SPC3YLR066W HSP12P22943 109 aaKnown RBP2.1□□□□□ -2.07
SPC3YLR066W APS3P47064 194 aa2.1□□□□□ -2.07
SPC3YLR066W EST3Q03096 181 aa2.1□□□□□ -2.07
SPC3YLR066W SCS22Q6Q595 175 aa2.1□□□□□ -2.07
SPC3YLR066W YGL041W-AP0C5N3 154 aa2.09□□□□□ -2.07
SPC3YLR066W YDR366CP87287 132 aa2.09□□□□□ -2.07
SPC3YLR066W KEI1Q06346 221 aa2.09□□□□□ -2.07
SPC3YLR066W ACC1Q00955 2233 aaKnown RBP2.09□□□□□ -2.08
SPC3YLR066W TAF2P23255 1407 aa2.08□□□□□ -2.08
SPC3YLR066W DUR1,2P32528 1835 aaKnown RBP2.08□□□□□ -2.08
SPC3YLR066W KIN28P06242 306 aa2.08□□□□□ -2.08
SPC3YLR066W RPC19P28000 142 aaKnown RBP2.08□□□□□ -2.08
SPC3YLR066W YKR070WP36151 352 aaKnown RBP2.08□□□□□ -2.08
SPC3YLR066W YMR320WQ04897 101 aa2.08□□□□□ -2.08
SPC3YLR066W IRC19Q07843 230 aa2.08□□□□□ -2.08
SPC3YLR066W MDS3P53094 1487 aa2.07□□□□□ -2.08
SPC3YLR066W YEL014CP39999 101 aa2.07□□□□□ -2.08
SPC3YLR066W GPI2P46961 280 aa2.07□□□□□ -2.08
SPC3YLR066W SPT6P23615 1451 aaKnown RBP2.07□□□□□ -2.08
SPC3YLR066W ECM31P38122 312 aa2.06□□□□□ -2.08
SPC3YLR066W VMA10P48836 114 aaKnown RBP2.06□□□□□ -2.08
SPC3YLR066W LTE1P07866 1435 aa2.06□□□□□ -2.08
SPC3YLR066W YFL051CP43552 160 aa2.05□□□□□ -2.08
SPC3YLR066W DCV1P43595 202 aa2.05□□□□□ -2.08
SPC3YLR066W CMC4Q3E7A9 73 aa2.05□□□□□ -2.08
SPC3YLR066W HSL1P34244 1518 aa2.05□□□□□ -2.08
SPC3YLR066W BPT1P14772 1559 aa2.05□□□□□ -2.08
SPC3YLR066W MYO2P19524 1574 aaKnown RBP2.04□□□□□ -2.08
SPC3YLR066W SUI1P32911 108 aaKnown RBP2.04□□□□□ -2.08
SPC3YLR066W YHL037CP38733 133 aa2.04□□□□□ -2.08
SPC3YLR066W YGR201CP42936 225 aa2.04□□□□□ -2.08
SPC3YLR066W YGR039WP53225 103 aa2.04□□□□□ -2.08
SPC3YLR066W HHO1P53551 258 aa2.04□□□□□ -2.08
SPC3YLR066W COF1Q03048 143 aaKnown RBP2.04□□□□□ -2.08
SPC3YLR066W BNI1P41832 1953 aa2.03□□□□□ -2.08
SPC3YLR066W DNF1P32660 1571 aa2.03□□□□□ -2.08
SPC3YLR066W VAM10Q08474 114 aa2.02□□□□□ -2.09
SPC3YLR066W YCF1P39109 1515 aaKnown RBP2.01□□□□□ -2.09
SPC3YLR066W HYP2P23301 157 aaKnown RBP2.01□□□□□ -2.09
SPC3YLR066W HSP150P32478 413 aa2.01□□□□□ -2.09
SPC3YLR066W IPT1P38954 527 aa2.01□□□□□ -2.09
SPC3YLR066W YPR153WQ06537 140 aa2.01□□□□□ -2.09
SPC3YLR066W FCY1Q12178 158 aa2.01□□□□□ -2.09
SPC3YLR066W HIR3P47171 1648 aa1.99□□□□□ -2.09
SPC3YLR066W CDC25P04821 1589 aa1.99□□□□□ -2.09
SPC3YLR066W YBR027CP38220 110 aa1.99□□□□□ -2.09
SPC3YLR066W HUA1P40325 198 aa1.99□□□□□ -2.09
SPC3YLR066W CSN9Q03981 162 aa1.99□□□□□ -2.09
SPC3YLR066W GPI11Q06636 219 aa1.99□□□□□ -2.09
SPC3YLR066W YAR064WP39563 99 aa1.98□□□□□ -2.09
SPC3YLR066W LSM8P47093 109 aaKnown RBP1.98□□□□□ -2.09
SPC3YLR066W SPG1P50088 95 aa1.98□□□□□ -2.09
SPC3YLR066W YCL001W-AP87012 153 aa1.98□□□□□ -2.09
SPC3YLR066W SPC3Q12133 184 aa1.98□□□□□ -2.09
SPC3YLR066W RPO31P04051 1460 aa1.98□□□□□ -2.09
SPC3YLR066W COX5BP00425 151 aa1.97□□□□□ -2.09
SPC3YLR066W NHP6AP11632 93 aaKnown RBP1.97□□□□□ -2.09
SPC3YLR066W ATG8P38182 117 aaRIP-Chip data1.97□□□□□ -2.09not detected
SPC3YLR066W PHB1P40961 287 aa1.97□□□□□ -2.09
SPC3YLR066W LCL2Q08045 131 aa1.97□□□□□ -2.09
SPC3YLR066W SSK2P53599 1579 aa1.97□□□□□ -2.09
SPC3YLR066W IRC20Q06554 1556 aa1.97□□□□□ -2.09
SPC3YLR066W RPA190P10964 1664 aaKnown RBP1.96□□□□□ -2.1
SPC3YLR066W GEA2P39993 1459 aaKnown RBP1.96□□□□□ -2.1
SPC3YLR066W RPS1BP23248 255 aaKnown RBP1.96□□□□□ -2.1
SPC3YLR066W FYV5P25585 152 aa1.96□□□□□ -2.1
SPC3YLR066W YIL102CP40488 101 aa1.96□□□□□ -2.1
SPC3YLR066W DIE2P50076 525 aa1.96□□□□□ -2.1
SPC3YLR066W CCW12Q12127 133 aa1.96□□□□□ -2.1
SPC3YLR066W MMS1Q06211 1407 aa1.96□□□□□ -2.1
SPC3YLR066W ATG2P53855 1592 aa1.96□□□□□ -2.1
SPC3YLR066W YNL019CP53975 284 aa1.95□□□□□ -2.1
SPC3YLR066W HUT1Q12520 339 aa1.95□□□□□ -2.1
SPC3YLR066W CYC2P38909 366 aa1.94□□□□□ -2.1
SPC3YLR066W MHF1Q3E835 90 aa1.94□□□□□ -2.1
SPC3YLR066W RIB3Q99258 208 aa1.94□□□□□ -2.1
SPC3YLR066W YHR140WP38842 239 aa1.93□□□□□ -2.1
SPC3YLR066W EMC4P53073 190 aa1.93□□□□□ -2.1
SPC3YLR066W SOM1Q05676 74 aa1.93□□□□□ -2.1
SPC3YLR066W RAF1Q06891 181 aa1.93□□□□□ -2.1
SPC3YLR066W ATP14Q12349 124 aa1.93□□□□□ -2.1
SPC3YLR066W ESC1Q03661 1658 aaKnown RBP1.93□□□□□ -2.1
SPC3YLR066W GIM4P40005 111 aaKnown RBP1.92□□□□□ -2.1
SPC3YLR066W YGL204CP53089 101 aa1.92□□□□□ -2.1
SPC3YLR066W YGR042WP53227 271 aa1.92□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 73.5 ms