RNA–Protein interactions for RNA: YJR005W

APL1, Transcript of Beta-adaptin, yeast

Gene APL1, Length 2,103 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APL1	YJR005W	GPI19	Q04082	140 aa		0.95	□□□□□ -2.26
APL1	YJR005W	YPR098C	Q06089	161 aa		0.95	□□□□□ -2.26
APL1	YJR005W	NMA1	Q06178	401 aa	Known RBP	0.95	□□□□□ -2.26
APL1	YJR005W	KEI1	Q06346	221 aa		0.95	□□□□□ -2.26
APL1	YJR005W	PIN3	Q06449	215 aa		0.95	□□□□□ -2.26
APL1	YJR005W	RAF1	Q06891	181 aa		0.95	□□□□□ -2.26
APL1	YJR005W	HEM25	Q07534	307 aa		0.95	□□□□□ -2.26
APL1	YJR005W	TIM18	Q08749	192 aa		0.95	□□□□□ -2.26
APL1	YJR005W	PRM3	Q08931	133 aa		0.95	□□□□□ -2.26
APL1	YJR005W	FCY1	Q12178	158 aa		0.95	□□□□□ -2.26
APL1	YJR005W	RFM1	Q12192	310 aa		0.95	□□□□□ -2.26
APL1	YJR005W	YPS3	Q12303	508 aa		0.95	□□□□□ -2.26
APL1	YJR005W	MHF1	Q3E835	90 aa		0.95	□□□□□ -2.26
APL1	YJR005W	SUS1	Q6WNK7	96 aa		0.95	□□□□□ -2.26
APL1	YJR005W	IGO2	Q9P305	131 aa		0.95	□□□□□ -2.26
APL1	YJR005W	NUP188	P52593	1655 aa	Known RBP	0.95	□□□□□ -2.26
APL1	YJR005W	VTH1	P40438	1549 aa		0.94	□□□□□ -2.26
APL1	YJR005W	VTH2	P40890	1549 aa		0.94	□□□□□ -2.26
APL1	YJR005W	DNF1	P32660	1571 aa		0.94	□□□□□ -2.26
APL1	YJR005W	MSI1	P13712	422 aa		0.94	□□□□□ -2.26
APL1	YJR005W	RPL30	P14120	105 aa	Known RBP	0.94	□□□□□ -2.26
APL1	YJR005W	URA10	P30402	227 aa		0.94	□□□□□ -2.26
APL1	YJR005W	YKL102C	P34249	101 aa		0.94	□□□□□ -2.26
APL1	YJR005W	MCR1	P36060	302 aa	Known RBP	0.94	□□□□□ -2.26
APL1	YJR005W	PHO89	P38361	574 aa		0.94	□□□□□ -2.26
APL1	YJR005W	INM1	P38710	295 aa		0.94	□□□□□ -2.26
APL1	YJR005W	YHR140W	P38842	239 aa		0.94	□□□□□ -2.26
APL1	YJR005W	IRC22	P40006	225 aa		0.94	□□□□□ -2.26
APL1	YJR005W	YER181C	P40097	107 aa		0.94	□□□□□ -2.26
APL1	YJR005W	YNL198C	P40166	100 aa		0.94	□□□□□ -2.26
APL1	YJR005W	CYB5	P40312	120 aa		0.94	□□□□□ -2.26
APL1	YJR005W	YIL029C	P40538	142 aa		0.94	□□□□□ -2.26
APL1	YJR005W	EMC5	P40540	141 aa		0.94	□□□□□ -2.26
APL1	YJR005W	PAU15	P40585	124 aa		0.94	□□□□□ -2.26
APL1	YJR005W	YFR054C	P43622	192 aa		0.94	□□□□□ -2.26
APL1	YJR005W	FIP1	P45976	327 aa		0.94	□□□□□ -2.26
APL1	YJR005W	EMC4	P53073	190 aa		0.94	□□□□□ -2.26
APL1	YJR005W	CAX4	P53223	239 aa		0.94	□□□□□ -2.26
APL1	YJR005W	CPD1	P53314	239 aa		0.94	□□□□□ -2.26
APL1	YJR005W	SWS2	P53937	143 aa		0.94	□□□□□ -2.26
APL1	YJR005W	MRPS16	Q02608	121 aa		0.94	□□□□□ -2.26
APL1	YJR005W	GAS3	Q03655	524 aa		0.94	□□□□□ -2.26
APL1	YJR005W	YMR090W	Q04304	227 aa	Known RBP	0.94	□□□□□ -2.26
APL1	YJR005W	SHH4	Q06236	168 aa		0.94	□□□□□ -2.26
APL1	YJR005W	ANT1	Q06497	328 aa		0.94	□□□□□ -2.26
APL1	YJR005W	PBP4	Q07362	185 aa	Known RBP	0.94	□□□□□ -2.26
APL1	YJR005W	DAD1	Q12248	94 aa		0.94	□□□□□ -2.26
APL1	YJR005W	YDL180W	Q12301	547 aa		0.94	□□□□□ -2.26
APL1	YJR005W	MPD1	Q12404	318 aa	Known RBP	0.94	□□□□□ -2.26
APL1	YJR005W	IZH2	Q12442	317 aa		0.94	□□□□□ -2.26
APL1	YJR005W	BOL1	Q3E793	110 aa		0.94	□□□□□ -2.26
APL1	YJR005W	DOP1	Q03921	1698 aa		0.94	□□□□□ -2.26
APL1	YJR005W	URB1	P34241	1764 aa	Known RBP	0.94	□□□□□ -2.26
APL1	YJR005W	PDR15	Q04182	1529 aa	Known RBP	0.94	□□□□□ -2.26
APL1	YJR005W	COX5A	P00424	153 aa		0.94	□□□□□ -2.26
APL1	YJR005W	YCR085W	P25650	117 aa		0.94	□□□□□ -2.26
APL1	YJR005W	POP8	P38208	133 aa		0.94	□□□□□ -2.26
APL1	YJR005W	GCV3	P39726	170 aa	Predicted RBP	0.94	□□□□□ -2.26
APL1	YJR005W	SPO73	P40031	143 aa		0.94	□□□□□ -2.26
APL1	YJR005W	MPM1	P40364	252 aa		0.94	□□□□□ -2.26
APL1	YJR005W	BXI1	P48558	297 aa		0.94	□□□□□ -2.26
APL1	YJR005W	MST27	P53176	234 aa		0.94	□□□□□ -2.26
APL1	YJR005W	SPR6	Q01684	191 aa		0.94	□□□□□ -2.26
APL1	YJR005W	YMR082C	Q04276	118 aa		0.94	□□□□□ -2.26
APL1	YJR005W	FIT1	Q04433	528 aa		0.94	□□□□□ -2.26
APL1	YJR005W	AVO2	Q04749	426 aa		0.94	□□□□□ -2.26
APL1	YJR005W	YMR252C	Q04814	134 aa		0.94	□□□□□ -2.26
APL1	YJR005W	GAT3	Q07928	141 aa		0.94	□□□□□ -2.26
APL1	YJR005W	DGA1	Q08650	418 aa		0.94	□□□□□ -2.26
APL1	YJR005W	RRS1	Q08746	203 aa	Known RBP	0.94	□□□□□ -2.26
APL1	YJR005W	SLM3	Q12093	417 aa		0.94	□□□□□ -2.26
APL1	YJR005W	TIR4	Q12218	487 aa	Predicted RBP	0.94	□□□□□ -2.26
APL1	YJR005W	YOR097C	Q12274	175 aa	Predicted RBP	0.94	□□□□□ -2.26
APL1	YJR005W	JID1	Q12350	301 aa		0.94	□□□□□ -2.26
APL1	YJR005W	YLR412C-A	Q3E742	68 aa		0.94	□□□□□ -2.26
APL1	YJR005W	RPA190	P10964	1664 aa	Known RBP	0.93	□□□□□ -2.26
APL1	YJR005W	TIM9	O74700	87 aa		0.93	□□□□□ -2.26
APL1	YJR005W	POR1	P04840	283 aa	Known RBP	0.93	□□□□□ -2.26
APL1	YJR005W	RPL40A	P0CH08	128 aa	Known RBP	0.93	□□□□□ -2.26
APL1	YJR005W	RPL40B	P0CH09	128 aa	Known RBP	0.93	□□□□□ -2.26
APL1	YJR005W	ARF1	P11076	181 aa	Known RBP	0.93	□□□□□ -2.26
APL1	YJR005W	ARF2	P19146	181 aa	Known RBP	0.93	□□□□□ -2.26
APL1	YJR005W	YCR050C	P25630	102 aa		0.93	□□□□□ -2.26
APL1	YJR005W	YCR099C	P25657	155 aa		0.93	□□□□□ -2.26
APL1	YJR005W	ALK2	P32789	676 aa	Predicted RBP	0.93	□□□□□ -2.26
APL1	YJR005W	MID2	P36027	376 aa		0.93	□□□□□ -2.26
APL1	YJR005W	PAM17	P36147	197 aa		0.93	□□□□□ -2.26
APL1	YJR005W	MRPS9	P38120	278 aa		0.93	□□□□□ -2.26
APL1	YJR005W	SMP1	P38128	452 aa		0.93	□□□□□ -2.26
APL1	YJR005W	CSH1	P38287	376 aa		0.93	□□□□□ -2.26
APL1	YJR005W	MIG3	P39943	394 aa		0.93	□□□□□ -2.26
APL1	YJR005W	NSA2	P40078	261 aa	Known RBP	0.93	□□□□□ -2.26
APL1	YJR005W	GPI2	P46961	280 aa		0.93	□□□□□ -2.26
APL1	YJR005W	AIM25	P47140	327 aa		0.93	□□□□□ -2.26
APL1	YJR005W	DSK2	P48510	373 aa		0.93	□□□□□ -2.26
APL1	YJR005W	UBC13	P52490	153 aa		0.93	□□□□□ -2.26
APL1	YJR005W	VHT1	P53241	593 aa		0.93	□□□□□ -2.26
APL1	YJR005W	BUD25	P85052	153 aa		0.93	□□□□□ -2.26
APL1	YJR005W	YMR181C	Q03231	154 aa		0.93	□□□□□ -2.26
APL1	YJR005W	YLR012C	Q07927	99 aa		0.93	□□□□□ -2.26

Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms