RNA–Protein interactions for RNA: YHR172W

SPC97, Transcript of Component of the microtubule-nucleating Tub4p (gamma-tubulin) complex, yeast

Gene SPC97, Length 2,472 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPC97	YHR172W	PBA1	Q05778	276 aa		4.11	□□□□□ -1.75
SPC97	YHR172W	FEX1	Q08913	375 aa		4.11	□□□□□ -1.75
SPC97	YHR172W	FEX2	Q08991	375 aa		4.11	□□□□□ -1.75
SPC97	YHR172W	RRT1	P38192	103 aa		4.1	□□□□□ -1.75
SPC97	YHR172W	FLX1	P40464	311 aa		4.1	□□□□□ -1.75
SPC97	YHR172W	TIR3	P40552	269 aa		4.1	□□□□□ -1.75
SPC97	YHR172W	CAX4	P53223	239 aa		4.1	□□□□□ -1.75
SPC97	YHR172W	HAL1	Q01766	294 aa		4.1	□□□□□ -1.75
SPC97	YHR172W	CSI2	Q08054	341 aa		4.1	□□□□□ -1.75
SPC97	YHR172W	YER078W-A	Q3E7A2	54 aa		4.1	□□□□□ -1.75
SPC97	YHR172W	SCS22	Q6Q595	175 aa		4.1	□□□□□ -1.75
SPC97	YHR172W	YGL010W	P25338	174 aa		4.1	□□□□□ -1.75
SPC97	YHR172W	YPR063C	Q12160	140 aa		4.1	□□□□□ -1.75
SPC97	YHR172W	RAD10	P06838	210 aa		4.09	□□□□□ -1.75
SPC97	YHR172W	MRPL44	P19956	98 aa		4.09	□□□□□ -1.75
SPC97	YHR172W	YET1	P35723	206 aa		4.09	□□□□□ -1.75
SPC97	YHR172W	YDR029W	Q12111	104 aa		4.09	□□□□□ -1.75
SPC97	YHR172W	PDR10	P51533	1564 aa		4.09	□□□□□ -1.76
SPC97	YHR172W	MIG3	P39943	394 aa		4.09	□□□□□ -1.76
SPC97	YHR172W	ECO1	P43605	281 aa		4.09	□□□□□ -1.76
SPC97	YHR172W	SHH3	Q04487	196 aa		4.09	□□□□□ -1.76
SPC97	YHR172W	FIT3	Q08907	204 aa		4.09	□□□□□ -1.76
SPC97	YHR172W	YAL067W-A	Q8TGK6	75 aa		4.09	□□□□□ -1.76
SPC97	YHR172W	RRT13	P40042	185 aa		4.08	□□□□□ -1.76
SPC97	YHR172W	EMP24	P32803	203 aa	Known RBP	4.07	□□□□□ -1.76
SPC97	YHR172W	YHL042W	P38729	150 aa		4.07	□□□□□ -1.76
SPC97	YHR172W	YFR035C	P43608	114 aa		4.07	□□□□□ -1.76
SPC97	YHR172W	ERV14	P53173	138 aa		4.07	□□□□□ -1.76
SPC97	YHR172W	RIM9	Q04734	239 aa		4.07	□□□□□ -1.76
SPC97	YHR172W	SRL1	Q08673	210 aa		4.07	□□□□□ -1.76
SPC97	YHR172W	YRF1-3	P0CX14	1859 aa		4.07	□□□□□ -1.76
SPC97	YHR172W	YRF1-7	P0CX15	1859 aa		4.07	□□□□□ -1.76
SPC97	YHR172W	YRF1-6	P53819	1859 aa		4.07	□□□□□ -1.76
SPC97	YHR172W	YSP2	Q06681	1438 aa		4.07	□□□□□ -1.76
SPC97	YHR172W	LYS2	P07702	1392 aa		4.07	□□□□□ -1.76
SPC97	YHR172W	YOL162W	P0CF19	215 aa		4.07	□□□□□ -1.76
SPC97	YHR172W	HMRA1	P0CY11	126 aa		4.07	□□□□□ -1.76
SPC97	YHR172W	TVP23	P38962	199 aa		4.07	□□□□□ -1.76
SPC97	YHR172W	REE1	P40893	198 aa		4.07	□□□□□ -1.76
SPC97	YHR172W	ERG25	P53045	309 aa		4.07	□□□□□ -1.76
SPC97	YHR172W	KSH1	Q8TGJ3	72 aa		4.07	□□□□□ -1.76
SPC97	YHR172W	TDA2	P40045	126 aa		4.06	□□□□□ -1.76
SPC97	YHR172W	THG1	P53215	237 aa	Known RBP	4.06	□□□□□ -1.76
SPC97	YHR172W	ATP19	P81451	68 aa		4.06	□□□□□ -1.76
SPC97	YHR172W	COX5B	P00425	151 aa		4.06	□□□□□ -1.76
SPC97	YHR172W	YNL217W	P40152	326 aa		4.06	□□□□□ -1.76
SPC97	YHR172W	MPC3	P53311	146 aa		4.06	□□□□□ -1.76
SPC97	YHR172W	YPL067C	Q02754	198 aa		4.06	□□□□□ -1.76
SPC97	YHR172W	FMT1	P32785	401 aa		4.05	□□□□□ -1.76
SPC97	YHR172W	SNF11	P38956	169 aa		4.05	□□□□□ -1.76
SPC97	YHR172W	COA4	Q05809	96 aa		4.05	□□□□□ -1.76
SPC97	YHR172W	GPI11	Q06636	219 aa		4.05	□□□□□ -1.76
SPC97	YHR172W	YOR385W	Q08909	290 aa		4.05	□□□□□ -1.76
SPC97	YHR172W	UBC4	P15731	148 aa		4.05	□□□□□ -1.76
SPC97	YHR172W	YBL059W	P34224	193 aa		4.05	□□□□□ -1.76
SPC97	YHR172W	YKL044W	P36092	106 aa		4.05	□□□□□ -1.76
SPC97	YHR172W	SWD3	P38123	315 aa		4.05	□□□□□ -1.76
SPC97	YHR172W	SPO73	P40031	143 aa		4.05	□□□□□ -1.76
SPC97	YHR172W	YOR381W-A	Q3E804	55 aa		4.05	□□□□□ -1.76
SPC97	YHR172W	MAK31	P23059	88 aa		4.04	□□□□□ -1.76
SPC97	YHR172W	YGR026W	P53217	278 aa		4.04	□□□□□ -1.76
SPC97	YHR172W	RAF1	Q06891	181 aa		4.04	□□□□□ -1.76
SPC97	YHR172W	COA6	Q3E846	104 aa		4.04	□□□□□ -1.76
SPC97	YHR172W	HPA3	P39979	161 aa		4.04	□□□□□ -1.76
SPC97	YHR172W	YMR082C	Q04276	118 aa		4.04	□□□□□ -1.76
SPC97	YHR172W	YLR365W	Q7LIF2	110 aa		4.04	□□□□□ -1.76
SPC97	YHR172W	TY3B-I	Q7LHG5	1498 aa	Known RBP	4.03	□□□□□ -1.76
SPC97	YHR172W	MRPL11	P36521	249 aa	Predicted RBP	4.03	□□□□□ -1.76
SPC97	YHR172W	KNH1	P50112	268 aa		4.03	□□□□□ -1.76
SPC97	YHR172W	GRX5	Q02784	150 aa		4.03	□□□□□ -1.76
SPC97	YHR172W	MZM1	Q03429	123 aa	Predicted RBP	4.03	□□□□□ -1.76
SPC97	YHR172W	FLO11	P08640	1367 aa		4.03	□□□□□ -1.76
SPC97	YHR172W	SCW4	P53334	386 aa	Known RBP	4.03	□□□□□ -1.76
SPC97	YHR172W	PIN3	Q06449	215 aa		4.03	□□□□□ -1.76
SPC97	YHR172W	ECM12	O13529	151 aa		4.02	□□□□□ -1.77
SPC97	YHR172W	MSL1	P40567	111 aa	Predicted RBP	4.02	□□□□□ -1.77
SPC97	YHR172W	DUR1,2	P32528	1835 aa	Known RBP	4.02	□□□□□ -1.77
SPC97	YHR172W	ECM34	P38728	170 aa		4.02	□□□□□ -1.77
SPC97	YHR172W	PIR5	P46999	287 aa		4.02	□□□□□ -1.77
SPC97	YHR172W	YOS1	Q3E834	85 aa		4.02	□□□□□ -1.77
SPC97	YHR172W	MIC10	Q96VH5	97 aa		4.02	□□□□□ -1.77
SPC97	YHR172W	YHR032W-A	P0C5N6	59 aa		4.01	□□□□□ -1.77
SPC97	YHR172W	YCR043C	P25361	127 aa		4.01	□□□□□ -1.77
SPC97	YHR172W	YHP1	Q04116	353 aa		4.01	□□□□□ -1.77
SPC97	YHR172W	FZF1	P32805	299 aa		4.01	□□□□□ -1.77
SPC97	YHR172W	EMC5	P40540	141 aa		4.01	□□□□□ -1.77
SPC97	YHR172W	GPI19	Q04082	140 aa		4.01	□□□□□ -1.77
SPC97	YHR172W	QCR10	P37299	77 aa		4	□□□□□ -1.77
SPC97	YHR172W	PHO88	P38264	188 aa	Predicted RBP	4	□□□□□ -1.77
SPC97	YHR172W	SMD3	P43321	101 aa	Known RBP	4	□□□□□ -1.77
SPC97	YHR172W	SEN15	Q04675	128 aa		4	□□□□□ -1.77
SPC97	YHR172W	YOL085C	Q99345	113 aa		4	□□□□□ -1.77
SPC97	YHR172W	TY1B-BR	Q12193	1756 aa		3.99	□□□□□ -1.77
SPC97	YHR172W	COX4	P04037	155 aa		3.99	□□□□□ -1.77
SPC97	YHR172W	SOM1	Q05676	74 aa		3.99	□□□□□ -1.77
SPC97	YHR172W	INO4	P13902	151 aa		3.99	□□□□□ -1.77
SPC97	YHR172W	IRC23	Q08416	157 aa		3.99	□□□□□ -1.77
SPC97	YHR172W	ATG40	Q99325	256 aa		3.99	□□□□□ -1.77
SPC97	YHR172W	ASK1	P35734	292 aa		3.98	□□□□□ -1.77
SPC97	YHR172W	HRT1	Q08273	121 aa		3.98	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 72.4 ms