RNA–Protein interactions for RNA: YHR150W

PEX28, Transcript of Peroxisomal integral membrane peroxin, yeastyeast

Gene PEX28, Length 1,740 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX28YHR150W GSP1P32835 219 aaKnown RBP6.16□□□□□ -1.42
PEX28YHR150W GSP2P32836 220 aaKnown RBP6.16□□□□□ -1.42
PEX28YHR150W PMU1P36069 295 aa6.16□□□□□ -1.42
PEX28YHR150W YNR071CP53757 342 aa6.16□□□□□ -1.42
PEX28YHR150W ATP19P81451 68 aa6.16□□□□□ -1.42
PEX28YHR150W TRI1Q05024 226 aa6.16□□□□□ -1.42
PEX28YHR150W TMA7Q3E764 64 aaKnown RBP6.16□□□□□ -1.42
PEX28YHR150W RPL31AP0C2H8 113 aaKnown RBP6.15□□□□□ -1.42
PEX28YHR150W RPL31BP0C2H9 113 aaKnown RBP6.15□□□□□ -1.42
PEX28YHR150W SPS100P13130 326 aa6.15□□□□□ -1.42
PEX28YHR150W HAP3P13434 144 aa6.15□□□□□ -1.42
PEX28YHR150W YCR022CP25620 114 aa6.15□□□□□ -1.42
PEX28YHR150W ZRT1P32804 376 aa6.15□□□□□ -1.42
PEX28YHR150W LSM2P38203 95 aaKnown RBP6.15□□□□□ -1.42
PEX28YHR150W CSH1P38287 376 aa6.15□□□□□ -1.42
PEX28YHR150W DOG2P38773 246 aa6.15□□□□□ -1.42
PEX28YHR150W BDH1P39714 382 aa6.15□□□□□ -1.42
PEX28YHR150W SDS23P53172 527 aa6.15□□□□□ -1.42
PEX28YHR150W COX18P53239 316 aa6.15□□□□□ -1.42
PEX28YHR150W GIM5Q04493 163 aa6.15□□□□□ -1.42
PEX28YHR150W NDE2Q07500 545 aa6.15□□□□□ -1.42
PEX28YHR150W IRC25Q07951 179 aa6.15□□□□□ -1.42
PEX28YHR150W YDL009CQ12210 107 aa6.15□□□□□ -1.42
PEX28YHR150W FZF1P32805 299 aa6.14□□□□□ -1.43
PEX28YHR150W YBL071CP38185 102 aa6.14□□□□□ -1.43
PEX28YHR150W SGN1P40561 250 aaKnown RBP RIP-Chip data6.14□□□□□ -1.43not detected
PEX28YHR150W YFL054CP43549 646 aa6.14□□□□□ -1.43
PEX28YHR150W YDL183CP48569 320 aa6.14□□□□□ -1.43
PEX28YHR150W YNL046WP53956 172 aa6.14□□□□□ -1.43
PEX28YHR150W YDL157CQ12082 118 aa6.14□□□□□ -1.43
PEX28YHR150W YBR056W-AI2HB52 66 aa6.13□□□□□ -1.43
PEX28YHR150W TIR1P10863 254 aa6.13□□□□□ -1.43
PEX28YHR150W SFT2P38166 215 aa6.13□□□□□ -1.43
PEX28YHR150W ICS2P38284 255 aa6.13□□□□□ -1.43
PEX28YHR150W YGR018CP53211 109 aa6.13□□□□□ -1.43
PEX28YHR150W YNR064CP53750 290 aa6.13□□□□□ -1.43
PEX28YHR150W CNL1Q06333 122 aa6.13□□□□□ -1.43
PEX28YHR150W RKI1Q12189 258 aa6.13□□□□□ -1.43
PEX28YHR150W SOR1P35497 357 aaKnown RBP6.13□□□□□ -1.43
PEX28YHR150W LST8P41318 303 aa6.13□□□□□ -1.43
PEX28YHR150W SOR2Q07786 357 aa6.13□□□□□ -1.43
PEX28YHR150W WIP1Q2V2P8 89 aa6.13□□□□□ -1.43
PEX28YHR150W SCS22Q6Q595 175 aa6.13□□□□□ -1.43
PEX28YHR150W VMA16P23968 213 aa6.12□□□□□ -1.43
PEX28YHR150W YGL118CP53132 145 aa6.12□□□□□ -1.43
PEX28YHR150W MRX11Q03079 207 aa6.12□□□□□ -1.43
PEX28YHR150W YDR215CQ12240 137 aa6.12□□□□□ -1.43
PEX28YHR150W YCL048W-AQ2V2Q2 79 aa6.12□□□□□ -1.43
PEX28YHR150W RPL23AP0CX41 137 aaKnown RBP6.11□□□□□ -1.43
PEX28YHR150W RPL23BP0CX42 137 aaKnown RBP6.11□□□□□ -1.43
PEX28YHR150W YPT10P38146 199 aa6.11□□□□□ -1.43
PEX28YHR150W SEC72P39742 193 aaKnown RBP6.11□□□□□ -1.43
PEX28YHR150W YNL200CP40165 246 aaKnown RBP6.11□□□□□ -1.43
PEX28YHR150W TIM10P87108 93 aa6.11□□□□□ -1.43
PEX28YHR150W MSC3Q05812 728 aa6.11□□□□□ -1.43
PEX28YHR150W PAU23Q07987 124 aa6.11□□□□□ -1.43
PEX28YHR150W PAU17Q12370 124 aa6.11□□□□□ -1.43
PEX28YHR150W GCN1P33892 2672 aaKnown RBP6.11□□□□□ -1.43
PEX28YHR150W MRS1P07266 363 aa6.11□□□□□ -1.43
PEX28YHR150W YKR045CP36138 183 aa6.11□□□□□ -1.43
PEX28YHR150W ALG14P38242 237 aa6.11□□□□□ -1.43
PEX28YHR150W HAC1P41546 238 aa6.11□□□□□ -1.43
PEX28YHR150W CWC27Q02770 301 aa6.11□□□□□ -1.43
PEX28YHR150W ARC18Q05933 178 aaKnown RBP6.11□□□□□ -1.43
PEX28YHR150W FSF1Q12029 327 aaKnown RBP6.11□□□□□ -1.43
PEX28YHR150W AYT1Q12226 474 aa6.11□□□□□ -1.43
PEX28YHR150W MRPL31P14063 131 aaPredicted RBP6.1□□□□□ -1.43
PEX28YHR150W UTR5P32630 166 aa6.1□□□□□ -1.43
PEX28YHR150W MTR2P34232 184 aaKnown RBP6.1□□□□□ -1.43
PEX28YHR150W YFR045WP43617 309 aa6.1□□□□□ -1.43
PEX28YHR150W HST4P53688 370 aa6.1□□□□□ -1.43
PEX28YHR150W YPL162CQ12042 273 aa6.1□□□□□ -1.43
PEX28YHR150W SEC11P15367 167 aa6.09□□□□□ -1.43
PEX28YHR150W YGL230CP53074 147 aa6.09□□□□□ -1.43
PEX28YHR150W SDH7Q04401 133 aa6.09□□□□□ -1.43
PEX28YHR150W TVP18Q04767 167 aa6.09□□□□□ -1.43
PEX28YHR150W IES6P32617 166 aa6.08□□□□□ -1.44
PEX28YHR150W ADH5P38113 351 aaKnown RBP6.08□□□□□ -1.44
PEX28YHR150W YER188WP40103 239 aa6.08□□□□□ -1.44
PEX28YHR150W MSL1P40567 111 aaPredicted RBP6.08□□□□□ -1.44
PEX28YHR150W GZF3P42944 551 aaKnown RBP6.08□□□□□ -1.44
PEX28YHR150W BRP1P53194 125 aa6.08□□□□□ -1.44
PEX28YHR150W YGR151CP53287 111 aa6.08□□□□□ -1.44
PEX28YHR150W RXT3Q07458 294 aa6.08□□□□□ -1.44
PEX28YHR150W TIR2P33890 251 aa6.08□□□□□ -1.44
PEX28YHR150W YJL213WP40896 331 aa6.08□□□□□ -1.44
PEX28YHR150W YIP1P53039 248 aa6.08□□□□□ -1.44
PEX28YHR150W DAD4P69851 72 aa6.08□□□□□ -1.44
PEX28YHR150W SNA4Q07549 140 aa6.08□□□□□ -1.44
PEX28YHR150W ATO3Q12359 275 aa6.08□□□□□ -1.44
PEX28YHR150W MDM10P18409 493 aa6.07□□□□□ -1.44
PEX28YHR150W YCR007CP25354 239 aa6.07□□□□□ -1.44
PEX28YHR150W PAU7P39545 55 aa6.07□□□□□ -1.44
PEX28YHR150W YMR141CP40211 102 aa6.07□□□□□ -1.44
PEX28YHR150W SBH2P52871 88 aa6.07□□□□□ -1.44
PEX28YHR150W THG1P53215 237 aaKnown RBP6.07□□□□□ -1.44
PEX28YHR150W POP3P53833 195 aaPredicted RBP6.07□□□□□ -1.44
PEX28YHR150W YNL234WP53857 426 aa6.07□□□□□ -1.44
PEX28YHR150W YDR366CP87287 132 aa6.07□□□□□ -1.44
PEX28YHR150W TMC1Q08422 150 aaPredicted RBP6.07□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 349.9 ms