RNA–Protein interactions for RNA: YGR247W

CPD1, Transcript of Cyclic nucleotide phosphodiesterase, yeastyeast

Gene CPD1, Length 720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CPD1YGR247W SPI1P40092 148 aa6.33□□□□□ -1.4
CPD1YGR247W COA4Q05809 96 aa6.33□□□□□ -1.4
CPD1YGR247W VTS1Q08831 523 aaKnown RBP RIP-Chip data6.33□□□□□ -1.4not detected
CPD1YGR247W FIT2Q08906 153 aa6.33□□□□□ -1.4
CPD1YGR247W RPL11AP0C0W9 174 aaKnown RBP6.32□□□□□ -1.4
CPD1YGR247W CPT1P17898 393 aa6.32□□□□□ -1.4
CPD1YGR247W RPS2P25443 254 aaKnown RBP6.32□□□□□ -1.4
CPD1YGR247W ATC1Q04005 294 aa6.32□□□□□ -1.4
CPD1YGR247W AVO2Q04749 426 aa6.32□□□□□ -1.4
CPD1YGR247W YMR253CQ04835 414 aa6.32□□□□□ -1.4
CPD1YGR247W RPL11BQ3E757 174 aaPredicted RBP6.32□□□□□ -1.4
CPD1YGR247W CDC50P25656 391 aa6.31□□□□□ -1.4
CPD1YGR247W ACP1P32463 125 aa6.31□□□□□ -1.4
CPD1YGR247W TOM7P53507 60 aa6.31□□□□□ -1.4
CPD1YGR247W YLR302CO13544 120 aa6.3□□□□□ -1.4
CPD1YGR247W Q0255P03881 472 aa6.3□□□□□ -1.4
CPD1YGR247W MRS1P07266 363 aa6.3□□□□□ -1.4
CPD1YGR247W CUP2P15315 225 aa6.3□□□□□ -1.4
CPD1YGR247W SPO13P23624 291 aa6.3□□□□□ -1.4
CPD1YGR247W AHT1P29589 182 aa6.3□□□□□ -1.4
CPD1YGR247W YCH1P42937 148 aa6.3□□□□□ -1.4
CPD1YGR247W YJR111CP47148 283 aaKnown RBP6.3□□□□□ -1.4
CPD1YGR247W DSK2P48510 373 aa6.3□□□□□ -1.4
CPD1YGR247W HTB2P02294 131 aa6.29□□□□□ -1.4
CPD1YGR247W CDC40P40968 455 aaPredicted RBP6.29□□□□□ -1.4
CPD1YGR247W RIB4P50861 169 aaPredicted RBP6.29□□□□□ -1.4
CPD1YGR247W ATP23P53722 227 aa6.29□□□□□ -1.4
CPD1YGR247W MRPL50P53724 139 aa6.29□□□□□ -1.4
CPD1YGR247W FCF2Q12035 217 aaPredicted RBP6.29□□□□□ -1.4
CPD1YGR247W ACB1P31787 87 aa6.27□□□□□ -1.41
CPD1YGR247W RRT13P40042 185 aa6.27□□□□□ -1.41
CPD1YGR247W KEG1P43614 200 aa6.27□□□□□ -1.41
CPD1YGR247W YNR066CP53752 436 aa6.27□□□□□ -1.41
CPD1YGR247W YDR366CP87287 132 aa6.27□□□□□ -1.41
CPD1YGR247W PBA1Q05778 276 aa6.27□□□□□ -1.41
CPD1YGR247W YLR125WQ12138 136 aa6.27□□□□□ -1.41
CPD1YGR247W CKS1P20486 150 aaKnown RBP6.26□□□□□ -1.41
CPD1YGR247W COQ3P27680 312 aa6.26□□□□□ -1.41
CPD1YGR247W ASP1P38986 381 aaPredicted RBP6.26□□□□□ -1.41
CPD1YGR247W YLL066W-BQ8TGJ7 56 aa6.26□□□□□ -1.41
CPD1YGR247W YPL229WQ99395 206 aa6.26□□□□□ -1.41
CPD1YGR247W YGL117WP53133 265 aa6.25□□□□□ -1.41
CPD1YGR247W RTC6O14464 93 aa6.24□□□□□ -1.41
CPD1YGR247W RPL31BP0C2H9 113 aaKnown RBP6.24□□□□□ -1.41
CPD1YGR247W TRS20P38334 175 aa6.24□□□□□ -1.41
CPD1YGR247W KRE9P39005 276 aa6.24□□□□□ -1.41
CPD1YGR247W YJL028WP47062 111 aa6.24□□□□□ -1.41
CPD1YGR247W BRP1P53194 125 aa6.24□□□□□ -1.41
CPD1YGR247W CAF40P53829 373 aa6.24□□□□□ -1.41
CPD1YGR247W YHR173CP38864 112 aa6.23□□□□□ -1.41
CPD1YGR247W MRPS17Q03246 237 aaPredicted RBP6.23□□□□□ -1.41
CPD1YGR247W ORM2Q06144 216 aa6.23□□□□□ -1.41
CPD1YGR247W TY1A-BRQ12217 440 aa6.23□□□□□ -1.41
CPD1YGR247W RPL16BP26785 198 aaKnown RBP6.22□□□□□ -1.41
CPD1YGR247W NNK1P36003 928 aa6.22□□□□□ -1.41
CPD1YGR247W MRPL28P36527 147 aa6.22□□□□□ -1.41
CPD1YGR247W YBR292CP38357 123 aa6.22□□□□□ -1.41
CPD1YGR247W YNL217WP40152 326 aa6.22□□□□□ -1.41
CPD1YGR247W YMR141CP40211 102 aa6.22□□□□□ -1.41
CPD1YGR247W HUA1P40325 198 aa6.22□□□□□ -1.41
CPD1YGR247W RAV2Q03956 351 aa6.22□□□□□ -1.41
CPD1YGR247W AME1P38313 324 aa6.21□□□□□ -1.42
CPD1YGR247W YDL183CP48569 320 aa6.21□□□□□ -1.42
CPD1YGR247W YLR342W-AQ3E810 57 aa6.21□□□□□ -1.42
CPD1YGR247W COX16P47081 118 aa6.2□□□□□ -1.42
CPD1YGR247W AIM34Q03673 198 aa6.2□□□□□ -1.42
CPD1YGR247W YBR200W-AQ3E755 54 aa6.2□□□□□ -1.42
CPD1YGR247W AGA1P32323 725 aa6.19□□□□□ -1.42
CPD1YGR247W DAD4P69851 72 aa6.19□□□□□ -1.42
CPD1YGR247W ANT1Q06497 328 aa6.19□□□□□ -1.42
CPD1YGR247W UTP23Q12339 254 aaKnown RBP6.19□□□□□ -1.42
CPD1YGR247W UBI4P0CG63 381 aaKnown RBP6.18□□□□□ -1.42
CPD1YGR247W MAG1P22134 296 aaKnown RBP6.18□□□□□ -1.42
CPD1YGR247W DPP1Q05521 289 aa6.18□□□□□ -1.42
CPD1YGR247W SDO1Q07953 250 aaKnown RBP6.18□□□□□ -1.42
CPD1YGR247W YOR015WQ12169 119 aa6.18□□□□□ -1.42
CPD1YGR247W DAD1Q12248 94 aa6.18□□□□□ -1.42
CPD1YGR247W SAR1P20606 190 aaKnown RBP6.17□□□□□ -1.42
CPD1YGR247W RNA15P25299 296 aaPredicted RBP6.17□□□□□ -1.42
CPD1YGR247W RPS0AP32905 252 aaKnown RBP6.17□□□□□ -1.42
CPD1YGR247W KTI12P34253 313 aaKnown RBP6.17□□□□□ -1.42
CPD1YGR247W EMC5P40540 141 aa6.17□□□□□ -1.42
CPD1YGR247W TAD2P47058 250 aa6.17□□□□□ -1.42
CPD1YGR247W SRB7P47822 140 aa6.17□□□□□ -1.42
CPD1YGR247W MGA1P53050 456 aa6.17□□□□□ -1.42
CPD1YGR247W YLR042CQ07990 161 aa6.17□□□□□ -1.42
CPD1YGR247W RPL33AP05744 107 aaKnown RBP6.16□□□□□ -1.42
CPD1YGR247W HMX1P32339 317 aa6.16□□□□□ -1.42
CPD1YGR247W YPT53P36019 220 aa6.16□□□□□ -1.42
CPD1YGR247W RPL33BP41056 107 aaKnown RBP6.16□□□□□ -1.42
CPD1YGR247W SMD3P43321 101 aaKnown RBP6.16□□□□□ -1.42
CPD1YGR247W YCL001W-AP87012 153 aa6.16□□□□□ -1.42
CPD1YGR247W YPR053CQ6Q5F3 151 aa6.16□□□□□ -1.42
CPD1YGR247W YPT10P38146 199 aa6.15□□□□□ -1.42
CPD1YGR247W LOC1P43586 204 aaPredicted RBP6.15□□□□□ -1.42
CPD1YGR247W NUP42P49686 430 aaKnown RBP6.15□□□□□ -1.42
CPD1YGR247W MRP10O75012 95 aa6.14□□□□□ -1.43
CPD1YGR247W YDR034C-AP0C289 58 aa6.14□□□□□ -1.43
CPD1YGR247W SVP26P38869 228 aa6.14□□□□□ -1.43
CPD1YGR247W YGL185CP53100 379 aa6.14□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 135.4 ms