RNA–Protein interactions for RNA: YGR134W

CAF130, Transcript of Subunit of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF130, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF130YGR134W YOR020W-AQ3E824 90 aa2.76□□□□□ -1.97
CAF130YGR134W YBR298C-AQ8TGK4 73 aa2.76□□□□□ -1.97
CAF130YGR134W YOL162WP0CF19 215 aa2.75□□□□□ -1.97
CAF130YGR134W DDI2P0CH63 225 aa2.75□□□□□ -1.97
CAF130YGR134W DDI3P0CH64 225 aa2.75□□□□□ -1.97
CAF130YGR134W YAR029WP39549 74 aa2.75□□□□□ -1.97
CAF130YGR134W BAT2P47176 376 aaKnown RBP2.75□□□□□ -1.97
CAF130YGR134W YGL194C-AQ2V2P6 80 aa2.75□□□□□ -1.97
CAF130YGR134W ODC2Q99297 307 aa2.75□□□□□ -1.97
CAF130YGR134W BET1P22804 142 aa2.75□□□□□ -1.97
CAF130YGR134W ASP1P38986 381 aaPredicted RBP2.75□□□□□ -1.97
CAF130YGR134W YMR099CQ03161 297 aaKnown RBP2.75□□□□□ -1.97
CAF130YGR134W SPG3Q04398 127 aaPredicted RBP2.75□□□□□ -1.97
CAF130YGR134W YPL264CQ08980 353 aa2.75□□□□□ -1.97
CAF130YGR134W FCF2Q12035 217 aaPredicted RBP2.75□□□□□ -1.97
CAF130YGR134W TOR1P35169 2470 aa2.75□□□□□ -1.97
CAF130YGR134W YGR017WP53210 297 aa2.75□□□□□ -1.97
CAF130YGR134W HTZ1Q12692 134 aaKnown RBP2.75□□□□□ -1.97
CAF130YGR134W YOR381W-AQ3E804 55 aa2.75□□□□□ -1.97
CAF130YGR134W PRE5P40302 234 aaKnown RBP2.74□□□□□ -1.97
CAF130YGR134W SPC3Q12133 184 aa2.74□□□□□ -1.97
CAF130YGR134W YML100W-AQ8TGT0 57 aa2.74□□□□□ -1.97
CAF130YGR134W SCO2P38072 301 aa2.74□□□□□ -1.97
CAF130YGR134W YER135CP40082 130 aa2.74□□□□□ -1.97
CAF130YGR134W YIR021W-AQ3E739 70 aa2.74□□□□□ -1.97
CAF130YGR134W UBR1P19812 1950 aa2.74□□□□□ -1.97
CAF130YGR134W URA5P13298 226 aaKnown RBP2.74□□□□□ -1.97
CAF130YGR134W SNC2P33328 115 aa2.74□□□□□ -1.97
CAF130YGR134W RPB11P38902 120 aa2.74□□□□□ -1.97
CAF130YGR134W YAL064WP39711 94 aa2.74□□□□□ -1.97
CAF130YGR134W YNL208WP40159 199 aaKnown RBP2.74□□□□□ -1.97
CAF130YGR134W RPL21AQ02753 160 aaKnown RBP2.74□□□□□ -1.97
CAF130YGR134W YDR415CQ04033 374 aaPredicted RBP2.74□□□□□ -1.97
CAF130YGR134W ATG39Q06159 398 aa2.74□□□□□ -1.97
CAF130YGR134W PST1Q12355 444 aa2.74□□□□□ -1.97
CAF130YGR134W HSP12P22943 109 aaKnown RBP2.73□□□□□ -1.97
CAF130YGR134W PHO88P38264 188 aaPredicted RBP2.73□□□□□ -1.97
CAF130YGR134W RTR2Q12378 196 aa2.73□□□□□ -1.97
CAF130YGR134W YEL028WP39989 153 aa2.73□□□□□ -1.97
CAF130YGR134W SPT15P13393 240 aaKnown RBP2.72□□□□□ -1.97
CAF130YGR134W MID2P36027 376 aa2.72□□□□□ -1.97
CAF130YGR134W AIM18P38884 321 aa2.72□□□□□ -1.97
CAF130YGR134W PBA1Q05778 276 aa2.72□□□□□ -1.97
CAF130YGR134W YOL014WQ08110 124 aa2.72□□□□□ -1.97
CAF130YGR134W YPR170W-BP0C5R9 85 aa2.72□□□□□ -1.97
CAF130YGR134W NSP1P14907 823 aaKnown RBP2.72□□□□□ -1.97
CAF130YGR134W YCR050CP25630 102 aa2.72□□□□□ -1.97
CAF130YGR134W YHL042WP38729 150 aa2.72□□□□□ -1.97
CAF130YGR134W ELC1Q03071 99 aa2.72□□□□□ -1.97
CAF130YGR134W CUP1-1P0CX80 61 aa2.72□□□□□ -1.97
CAF130YGR134W CUP1-2P0CX81 61 aa2.72□□□□□ -1.97
CAF130YGR134W NOP1P15646 327 aaKnown RBP2.72□□□□□ -1.97
CAF130YGR134W ANB1P19211 157 aa2.72□□□□□ -1.97
CAF130YGR134W YER134CP40081 178 aa2.72□□□□□ -1.97
CAF130YGR134W PEP8P40335 379 aa2.72□□□□□ -1.97
CAF130YGR134W ECO1P43605 281 aa2.72□□□□□ -1.97
CAF130YGR134W ALG9P53868 555 aaKnown RBP2.72□□□□□ -1.97
CAF130YGR134W YNL277W-AQ3E7Z0 62 aa2.72□□□□□ -1.97
CAF130YGR134W MED11Q99278 115 aa2.72□□□□□ -1.97
CAF130YGR134W CCA1P21269 546 aa2.71□□□□□ -1.98
CAF130YGR134W GPI2P46961 280 aa2.71□□□□□ -1.98
CAF130YGR134W HAL1Q01766 294 aa2.71□□□□□ -1.98
CAF130YGR134W AIM36Q03798 255 aa2.71□□□□□ -1.98
CAF130YGR134W SCW10Q04951 389 aa2.71□□□□□ -1.98
CAF130YGR134W YOR015WQ12169 119 aa2.71□□□□□ -1.98
CAF130YGR134W GPI18P38211 433 aa2.71□□□□□ -1.98
CAF130YGR134W AVT2P39981 480 aa2.71□□□□□ -1.98
CAF130YGR134W YFR045WP43617 309 aa2.71□□□□□ -1.98
CAF130YGR134W SMD1Q02260 146 aaPredicted RBP2.71□□□□□ -1.98
CAF130YGR134W YOL029CQ08187 201 aa2.71□□□□□ -1.98
CAF130YGR134W SRP21P32342 167 aa2.7□□□□□ -1.98
CAF130YGR134W DOC1P53068 250 aa2.7□□□□□ -1.98
CAF130YGR134W YPR014CQ6B0W2 109 aa2.7□□□□□ -1.98
CAF130YGR134W CUP9P41817 306 aa2.7□□□□□ -1.98
CAF130YGR134W YAE1P47118 141 aaPredicted RBP2.7□□□□□ -1.98
CAF130YGR134W EST3Q03096 181 aa2.7□□□□□ -1.98
CAF130YGR134W SYM1Q06563 197 aa2.7□□□□□ -1.98
CAF130YGR134W IRC25Q07951 179 aa2.7□□□□□ -1.98
CAF130YGR134W CSI2Q08054 341 aa2.7□□□□□ -1.98
CAF130YGR134W HUT1Q12520 339 aa2.7□□□□□ -1.98
CAF130YGR134W TIM9O74700 87 aa2.7□□□□□ -1.98
CAF130YGR134W MIG1P27705 504 aa2.7□□□□□ -1.98
CAF130YGR134W AHT1P29589 182 aa2.7□□□□□ -1.98
CAF130YGR134W RRT13P40042 185 aa2.7□□□□□ -1.98
CAF130YGR134W YDR274CP87283 123 aa2.7□□□□□ -1.98
CAF130YGR134W YDR115WQ04598 105 aa2.7□□□□□ -1.98
CAF130YGR134W RRT1P38192 103 aa2.69□□□□□ -1.98
CAF130YGR134W YPT31P38555 223 aaKnown RBP2.69□□□□□ -1.98
CAF130YGR134W MOB1P40484 314 aa2.69□□□□□ -1.98
CAF130YGR134W YIL054WP40524 105 aa2.69□□□□□ -1.98
CAF130YGR134W IGO1P53897 168 aa2.69□□□□□ -1.98
CAF130YGR134W YCL001W-AP87012 153 aa2.69□□□□□ -1.98
CAF130YGR134W YMR295CQ03559 197 aa2.69□□□□□ -1.98
CAF130YGR134W YPR114WQ06107 315 aa2.69□□□□□ -1.98
CAF130YGR134W SCS22Q6Q595 175 aa2.69□□□□□ -1.98
CAF130YGR134W SAS5Q99314 248 aa2.69□□□□□ -1.98
CAF130YGR134W TVP23P38962 199 aa2.69□□□□□ -1.98
CAF130YGR134W GON7P46984 123 aa2.69□□□□□ -1.98
CAF130YGR134W MZM1Q03429 123 aaPredicted RBP2.69□□□□□ -1.98
CAF130YGR134W YMR230W-AQ3E7B5 62 aa2.69□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms