RNA–Protein interactions for RNA: YGR048W

UFD1, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene UFD1, Length 1,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD1YGR048W YSR3P23501 404 aa6.77□□□□□ -1.33
UFD1YGR048W TIM23P32897 222 aa6.77□□□□□ -1.33
UFD1YGR048W FRM2P37261 193 aa6.77□□□□□ -1.33
UFD1YGR048W YHL026CP38740 315 aa6.77□□□□□ -1.33
UFD1YGR048W ATF1P40353 525 aa6.77□□□□□ -1.33
UFD1YGR048W YIP5P53108 310 aa6.77□□□□□ -1.33
UFD1YGR048W YNR071CP53757 342 aa6.77□□□□□ -1.33
UFD1YGR048W MIX17Q03667 156 aa6.77□□□□□ -1.33
UFD1YGR048W MRPL1Q04599 285 aa6.77□□□□□ -1.33
UFD1YGR048W GEP3Q08622 556 aa6.77□□□□□ -1.33
UFD1YGR048W REC114P32841 428 aa6.76□□□□□ -1.33
UFD1YGR048W SRX1P36077 127 aa6.76□□□□□ -1.33
UFD1YGR048W CCS1P40202 249 aaKnown RBP6.76□□□□□ -1.33
UFD1YGR048W TPC1P53257 314 aa6.76□□□□□ -1.33
UFD1YGR048W YNR048WP53740 393 aa6.76□□□□□ -1.33
UFD1YGR048W PET191Q02772 108 aa6.76□□□□□ -1.33
UFD1YGR048W YMR178WQ03219 274 aaKnown RBP6.76□□□□□ -1.33
UFD1YGR048W HPA2Q06592 156 aa6.76□□□□□ -1.33
UFD1YGR048W YDL218WQ07629 317 aa6.76□□□□□ -1.33
UFD1YGR048W YPQ1Q12010 308 aa6.76□□□□□ -1.33
UFD1YGR048W YRA1Q12159 226 aaKnown RBP6.76□□□□□ -1.33
UFD1YGR048W RPL1AP0CX43 217 aaKnown RBP6.75□□□□□ -1.33
UFD1YGR048W RPL1BP0CX44 217 aaKnown RBP6.75□□□□□ -1.33
UFD1YGR048W VMA11P32842 164 aa6.75□□□□□ -1.33
UFD1YGR048W GCS1P35197 352 aa6.75□□□□□ -1.33
UFD1YGR048W MST28P39552 234 aa6.75□□□□□ -1.33
UFD1YGR048W YIL059CP40520 121 aa6.75□□□□□ -1.33
UFD1YGR048W EGT2P42835 1041 aa6.75□□□□□ -1.33
UFD1YGR048W YGR039WP53225 103 aa6.75□□□□□ -1.33
UFD1YGR048W YOR376WQ08900 122 aa6.75□□□□□ -1.33
UFD1YGR048W USV1Q12132 391 aa6.75□□□□□ -1.33
UFD1YGR048W YPR108W-AQ3E7B3 70 aa6.75□□□□□ -1.33
UFD1YGR048W HUG1Q6Q5K6 68 aa6.75□□□□□ -1.33
UFD1YGR048W RFA2P26754 273 aaKnown RBP6.74□□□□□ -1.33
UFD1YGR048W CWP2P43497 92 aa6.74□□□□□ -1.33
UFD1YGR048W YGR045CP53229 120 aa6.74□□□□□ -1.33
UFD1YGR048W AIM34Q03673 198 aa6.74□□□□□ -1.33
UFD1YGR048W XYL2Q07993 356 aa6.74□□□□□ -1.33
UFD1YGR048W YOR387CQ08910 206 aa6.74□□□□□ -1.33
UFD1YGR048W YBR255C-AQ3E776 120 aa6.74□□□□□ -1.33
UFD1YGR048W HTL1Q9URQ5 78 aa6.74□□□□□ -1.33
UFD1YGR048W UBC5P15732 148 aa6.73□□□□□ -1.33
UFD1YGR048W RPA12P32529 125 aaKnown RBP6.73□□□□□ -1.33
UFD1YGR048W YKR041WP36134 250 aa6.73□□□□□ -1.33
UFD1YGR048W UBS1P38290 277 aa6.73□□□□□ -1.33
UFD1YGR048W YJL193WP39542 402 aa6.73□□□□□ -1.33
UFD1YGR048W YIP1P53039 248 aa6.73□□□□□ -1.33
UFD1YGR048W SDS23P53172 527 aa6.73□□□□□ -1.33
UFD1YGR048W SUN4P53616 420 aa6.73□□□□□ -1.33
UFD1YGR048W OPI10Q08202 246 aa6.73□□□□□ -1.33
UFD1YGR048W YFL041W-AQ3E817 63 aa6.73□□□□□ -1.33
UFD1YGR048W YER181CP40097 107 aa6.72□□□□□ -1.33
UFD1YGR048W MCH4Q08268 501 aa6.72□□□□□ -1.33
UFD1YGR048W RFM1Q12192 310 aa6.72□□□□□ -1.33
UFD1YGR048W USB1Q12208 290 aaKnown RBP6.72□□□□□ -1.33
UFD1YGR048W MPD1Q12404 318 aaKnown RBP6.72□□□□□ -1.33
UFD1YGR048W YAL063C-AQ3E791 96 aa6.72□□□□□ -1.33
UFD1YGR048W ENV10Q99382 181 aa6.72□□□□□ -1.33
UFD1YGR048W RPL23AP0CX41 137 aaKnown RBP6.71□□□□□ -1.34
UFD1YGR048W RPL23BP0CX42 137 aaKnown RBP6.71□□□□□ -1.34
UFD1YGR048W ERG28P40030 148 aa6.71□□□□□ -1.34
UFD1YGR048W DSK2P48510 373 aa6.71□□□□□ -1.34
UFD1YGR048W ATP19P81451 68 aa6.71□□□□□ -1.34
UFD1YGR048W ABF2Q02486 183 aa6.71□□□□□ -1.34
UFD1YGR048W RAV2Q03956 351 aa6.71□□□□□ -1.34
UFD1YGR048W YCR085WP25650 117 aa6.7□□□□□ -1.34
UFD1YGR048W APS1P35181 156 aa6.7□□□□□ -1.34
UFD1YGR048W YPL073CP40323 161 aa6.7□□□□□ -1.34
UFD1YGR048W CUP9P41817 306 aa6.7□□□□□ -1.34
UFD1YGR048W AQR1P53943 586 aa6.7□□□□□ -1.34
UFD1YGR048W YDR119W-AQ2V2P9 66 aa6.7□□□□□ -1.34
UFD1YGR048W ECM12O13529 151 aa6.69□□□□□ -1.34
UFD1YGR048W RPL20AP0CX23 172 aaKnown RBP6.69□□□□□ -1.34
UFD1YGR048W RPL20BP0CX24 172 aaPredicted RBP6.69□□□□□ -1.34
UFD1YGR048W PHO85P17157 305 aa6.69□□□□□ -1.34
UFD1YGR048W RPB8P20436 146 aa6.69□□□□□ -1.34
UFD1YGR048W MRPS5P33759 307 aa6.69□□□□□ -1.34
UFD1YGR048W MID2P36027 376 aa6.69□□□□□ -1.34
UFD1YGR048W YFR045WP43617 309 aa6.69□□□□□ -1.34
UFD1YGR048W YGR050CP53231 118 aa6.69□□□□□ -1.34
UFD1YGR048W MRX11Q03079 207 aa6.69□□□□□ -1.34
UFD1YGR048W ROT1Q03691 256 aa6.69□□□□□ -1.34
UFD1YGR048W ATG33Q06485 197 aa6.69□□□□□ -1.34
UFD1YGR048W MDM10P18409 493 aa6.68□□□□□ -1.34
UFD1YGR048W ARF2P19146 181 aaKnown RBP6.68□□□□□ -1.34
UFD1YGR048W OYE3P41816 400 aaPredicted RBP6.68□□□□□ -1.34
UFD1YGR048W YPI1P43587 155 aa6.68□□□□□ -1.34
UFD1YGR048W YOR292CQ08743 309 aa6.68□□□□□ -1.34
UFD1YGR048W TIM18Q08749 192 aa6.68□□□□□ -1.34
UFD1YGR048W FIT3Q08907 204 aa6.68□□□□□ -1.34
UFD1YGR048W MRPL23Q12487 163 aaPredicted RBP6.68□□□□□ -1.34
UFD1YGR048W BET2P20133 325 aa6.67□□□□□ -1.34
UFD1YGR048W SPC29P33419 253 aa6.67□□□□□ -1.34
UFD1YGR048W WSC2P53832 503 aa6.67□□□□□ -1.34
UFD1YGR048W YIL014C-AQ02598 104 aa6.67□□□□□ -1.34
UFD1YGR048W RLM1Q12224 676 aa6.67□□□□□ -1.34
UFD1YGR048W DFM1Q12743 341 aaKnown RBP6.67□□□□□ -1.34
UFD1YGR048W CDC26P14724 124 aa6.66□□□□□ -1.34
UFD1YGR048W SBH1P52870 82 aa6.66□□□□□ -1.34
UFD1YGR048W CAX4P53223 239 aa6.66□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 32 ms