RNA–Protein interactions for RNA: YGL155W

CDC43, Transcript of Beta subunit of geranylgeranyltransferase type I, yeastyeast

Gene CDC43, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC43YGL155W YPR014CQ6B0W2 109 aa4.43□□□□□ -1.7
CDC43YGL155W MRS1P07266 363 aa4.42□□□□□ -1.7
CDC43YGL155W YGP1P38616 354 aaKnown RBP4.42□□□□□ -1.7
CDC43YGL155W DOG2P38773 246 aa4.42□□□□□ -1.7
CDC43YGL155W TEM1P38987 245 aa4.42□□□□□ -1.7
CDC43YGL155W PAU7P39545 55 aa4.42□□□□□ -1.7
CDC43YGL155W SEC72P39742 193 aaKnown RBP4.42□□□□□ -1.7
CDC43YGL155W YER134CP40081 178 aa4.42□□□□□ -1.7
CDC43YGL155W TDA4P47153 279 aa4.42□□□□□ -1.7
CDC43YGL155W YIP1P53039 248 aa4.42□□□□□ -1.7
CDC43YGL155W STD1Q02794 444 aa4.42□□□□□ -1.7
CDC43YGL155W GAT3Q07928 141 aa4.42□□□□□ -1.7
CDC43YGL155W PAU23Q07987 124 aa4.42□□□□□ -1.7
CDC43YGL155W NAT5Q08689 176 aa4.42□□□□□ -1.7
CDC43YGL155W PAU17Q12370 124 aa4.42□□□□□ -1.7
CDC43YGL155W YCR024C-BQ3E7Z8 88 aa4.42□□□□□ -1.7
CDC43YGL155W YMR105W-AQ8TGS8 64 aa4.42□□□□□ -1.7
CDC43YGL155W YCR022CP25620 114 aa4.41□□□□□ -1.7
CDC43YGL155W ZRT1P32804 376 aa4.41□□□□□ -1.7
CDC43YGL155W YHL037CP38733 133 aa4.41□□□□□ -1.7
CDC43YGL155W SGN1P40561 250 aaKnown RBP RIP-Chip data4.41□□□□□ -1.7not detected
CDC43YGL155W LST8P41318 303 aa4.41□□□□□ -1.7
CDC43YGL155W PKR1Q03880 122 aaKnown RBP4.41□□□□□ -1.7
CDC43YGL155W RAV2Q03956 351 aa4.41□□□□□ -1.7
CDC43YGL155W NDE2Q07500 545 aa4.41□□□□□ -1.7
CDC43YGL155W VTS1Q08831 523 aaKnown RBP RIP-Chip data4.41□□□□□ -1.7not detected
CDC43YGL155W CSM4Q08955 156 aa4.41□□□□□ -1.7
CDC43YGL155W TPT1Q12272 230 aaKnown RBP4.41□□□□□ -1.7
CDC43YGL155W WIP1Q2V2P8 89 aa4.41□□□□□ -1.7
CDC43YGL155W HTL1Q9URQ5 78 aa4.41□□□□□ -1.7
CDC43YGL155W HTB2P02294 131 aa4.4□□□□□ -1.71
CDC43YGL155W CYC3P06182 269 aa4.4□□□□□ -1.71
CDC43YGL155W SEC4P07560 215 aaKnown RBP4.4□□□□□ -1.71
CDC43YGL155W DDI2P0CH63 225 aa4.4□□□□□ -1.71
CDC43YGL155W DDI3P0CH64 225 aa4.4□□□□□ -1.71
CDC43YGL155W YER121WP40076 114 aa4.4□□□□□ -1.71
CDC43YGL155W HAC1P41546 238 aa4.4□□□□□ -1.71
CDC43YGL155W YFL051CP43552 160 aa4.4□□□□□ -1.71
CDC43YGL155W YGR018CP53211 109 aa4.4□□□□□ -1.71
CDC43YGL155W TOM7P53507 60 aa4.4□□□□□ -1.71
CDC43YGL155W HST4P53688 370 aa4.4□□□□□ -1.71
CDC43YGL155W TVP18Q04767 167 aa4.4□□□□□ -1.71
CDC43YGL155W ATG33Q06485 197 aa4.4□□□□□ -1.71
CDC43YGL155W RKI1Q12189 258 aa4.4□□□□□ -1.71
CDC43YGL155W YDL009CQ12210 107 aa4.4□□□□□ -1.71
CDC43YGL155W MDM10P18409 493 aa4.39□□□□□ -1.71
CDC43YGL155W MRPL20P22354 195 aaPredicted RBP4.39□□□□□ -1.71
CDC43YGL155W FEN2P25621 512 aaKnown RBP4.39□□□□□ -1.71
CDC43YGL155W TIR2P33890 251 aa4.39□□□□□ -1.71
CDC43YGL155W PRS4P38063 326 aaPredicted RBP4.39□□□□□ -1.71
CDC43YGL155W RRT1P38192 103 aa4.39□□□□□ -1.71
CDC43YGL155W YBR090CP38253 122 aa4.39□□□□□ -1.71
CDC43YGL155W GZF3P42944 551 aaKnown RBP4.39□□□□□ -1.71
CDC43YGL155W YFL015CP43578 164 aa4.39□□□□□ -1.71
CDC43YGL155W SDS23P53172 527 aa4.39□□□□□ -1.71
CDC43YGL155W SED1Q01589 338 aa4.39□□□□□ -1.71
CDC43YGL155W YDL218WQ07629 317 aa4.39□□□□□ -1.71
CDC43YGL155W IRC25Q07951 179 aa4.39□□□□□ -1.71
CDC43YGL155W YPL162CQ12042 273 aa4.39□□□□□ -1.71
CDC43YGL155W YDL157CQ12082 118 aa4.39□□□□□ -1.71
CDC43YGL155W YOR029WQ12243 111 aa4.39□□□□□ -1.71
CDC43YGL155W HFA1P32874 2273 aa4.38□□□□□ -1.71
CDC43YGL155W MRPL31P14063 131 aaPredicted RBP4.38□□□□□ -1.71
CDC43YGL155W RPI1P23250 407 aaKnown RBP4.38□□□□□ -1.71
CDC43YGL155W VMA16P23968 213 aa4.38□□□□□ -1.71
CDC43YGL155W DAL80P26343 269 aa4.38□□□□□ -1.71
CDC43YGL155W IES6P32617 166 aa4.38□□□□□ -1.71
CDC43YGL155W GSP1P32835 219 aaKnown RBP4.38□□□□□ -1.71
CDC43YGL155W GSP2P32836 220 aaKnown RBP4.38□□□□□ -1.71
CDC43YGL155W ADH5P38113 351 aaKnown RBP4.38□□□□□ -1.71
CDC43YGL155W LSM2P38203 95 aaKnown RBP4.38□□□□□ -1.71
CDC43YGL155W YFR045WP43617 309 aa4.38□□□□□ -1.71
CDC43YGL155W YJL028WP47062 111 aa4.38□□□□□ -1.71
CDC43YGL155W DAD4P69851 72 aa4.38□□□□□ -1.71
CDC43YGL155W MIX17Q03667 156 aa4.38□□□□□ -1.71
CDC43YGL155W UPS3Q04006 179 aa4.38□□□□□ -1.71
CDC43YGL155W API2Q04413 109 aa4.38□□□□□ -1.71
CDC43YGL155W YLR050CQ12155 161 aaKnown RBP4.38□□□□□ -1.71
CDC43YGL155W MSL5Q12186 476 aaKnown RBP RIP-Chip data4.38□□□□□ -1.71not detected
CDC43YGL155W DAD1Q12248 94 aa4.38□□□□□ -1.71
CDC43YGL155W SEN1Q00416 2231 aaKnown RBP4.37□□□□□ -1.71
CDC43YGL155W RPL23AP0CX41 137 aaKnown RBP4.37□□□□□ -1.71
CDC43YGL155W RPL23BP0CX42 137 aaKnown RBP4.37□□□□□ -1.71
CDC43YGL155W YFL068WP0CX99 160 aa4.37□□□□□ -1.71
CDC43YGL155W YLL066W-AP0CY00 160 aa4.37□□□□□ -1.71
CDC43YGL155W YLL067W-AP0CY01 160 aa4.37□□□□□ -1.71
CDC43YGL155W UTR5P32630 166 aa4.37□□□□□ -1.71
CDC43YGL155W GPI18P38211 433 aa4.37□□□□□ -1.71
CDC43YGL155W FYV4P38783 130 aaPredicted RBP4.37□□□□□ -1.71
CDC43YGL155W ECM14P38836 430 aa4.37□□□□□ -1.71
CDC43YGL155W CTR2P38865 189 aa4.37□□□□□ -1.71
CDC43YGL155W MSL1P40567 111 aaPredicted RBP4.37□□□□□ -1.71
CDC43YGL155W YJL163CP46996 555 aa4.37□□□□□ -1.71
CDC43YGL155W YGL230CP53074 147 aa4.37□□□□□ -1.71
CDC43YGL155W ARC18Q05933 178 aaKnown RBP4.37□□□□□ -1.71
CDC43YGL155W YTH1Q06102 208 aaPredicted RBP4.37□□□□□ -1.71
CDC43YGL155W FSF1Q12029 327 aaKnown RBP4.37□□□□□ -1.71
CDC43YGL155W AYT1Q12226 474 aa4.37□□□□□ -1.71
CDC43YGL155W UTP23Q12339 254 aaKnown RBP4.37□□□□□ -1.71
CDC43YGL155W ADE8P04161 214 aa4.36□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 150 ms