RNA–Protein interactions for RNA: YER050C

RSM18, Transcript of Mitochondrial ribosomal protein of the small subunit, yeast

Gene RSM18, Length 417 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSM18	YER050C	PEX34	P25584	144 aa		0.77	□□□□□ -2.29
RSM18	YER050C	IPT1	P38954	527 aa		0.77	□□□□□ -2.29
RSM18	YER050C	YIL102C	P40488	101 aa		0.77	□□□□□ -2.29
RSM18	YER050C	YDR476C	Q03362	224 aa		0.77	□□□□□ -2.29
RSM18	YER050C	IRC19	Q07843	230 aa		0.77	□□□□□ -2.29
RSM18	YER050C	SPA2	P23201	1466 aa	Known RBP	0.77	□□□□□ -2.29
RSM18	YER050C	UBR1	P19812	1950 aa		0.77	□□□□□ -2.29
RSM18	YER050C	SRP21	P32342	167 aa		0.76	□□□□□ -2.29
RSM18	YER050C	UBC6	P33296	250 aa	Predicted RBP	0.76	□□□□□ -2.29
RSM18	YER050C	YER181C	P40097	107 aa		0.76	□□□□□ -2.29
RSM18	YER050C	FMN1	Q03778	218 aa		0.76	□□□□□ -2.29
RSM18	YER050C	RFU1	Q08003	200 aa		0.76	□□□□□ -2.29
RSM18	YER050C	EFG1	Q3E705	233 aa	Known RBP	0.76	□□□□□ -2.29
RSM18	YER050C	FMP49	A0A023PZB3	126 aa		0.75	□□□□□ -2.29
RSM18	YER050C	PHO13	P19881	312 aa		0.75	□□□□□ -2.29
RSM18	YER050C	MRPL24	P36525	258 aa	Predicted RBP	0.75	□□□□□ -2.29
RSM18	YER050C	RCF2	P53721	224 aa		0.75	□□□□□ -2.29
RSM18	YER050C	TMA23	Q03525	211 aa		0.75	□□□□□ -2.29
RSM18	YER050C	NMA1	Q06178	401 aa	Known RBP	0.75	□□□□□ -2.29
RSM18	YER050C	PRP8	P33334	2413 aa	Known RBP	0.74	□□□□□ -2.29
RSM18	YER050C	ATG8	P38182	117 aa	RIP-Chip data	0.74	□□□□□ -2.29	not detected
RSM18	YER050C	APS3	P47064	194 aa		0.74	□□□□□ -2.29
RSM18	YER050C	VAM10	Q08474	114 aa		0.74	□□□□□ -2.29
RSM18	YER050C	DDR48	P18899	430 aa	Known RBP	0.73	□□□□□ -2.29
RSM18	YER050C	BUB2	P26448	306 aa	Predicted RBP	0.73	□□□□□ -2.29
RSM18	YER050C	PET20	Q99373	253 aa		0.72	□□□□□ -2.29
RSM18	YER050C	PBI2	P0CT04	75 aa	Known RBP	0.71	□□□□□ -2.3
RSM18	YER050C	FIG1	P38224	298 aa		0.71	□□□□□ -2.3
RSM18	YER050C	HHY1	P39982	102 aa		0.71	□□□□□ -2.3
RSM18	YER050C	ROM2	P51862	1356 aa	Known RBP	0.7	□□□□□ -2.3
RSM18	YER050C	YGL041W-A	P0C5N3	154 aa		0.7	□□□□□ -2.3
RSM18	YER050C	DIE2	P50076	525 aa		0.7	□□□□□ -2.3
RSM18	YER050C	YNL122C	P53921	115 aa	Predicted RBP	0.7	□□□□□ -2.3
RSM18	YER050C	SEN15	Q04675	128 aa		0.7	□□□□□ -2.3
RSM18	YER050C	SCS22	Q6Q595	175 aa		0.7	□□□□□ -2.3
RSM18	YER050C	RIB3	Q99258	208 aa		0.7	□□□□□ -2.3
RSM18	YER050C	COX5B	P00425	151 aa		0.69	□□□□□ -2.3
RSM18	YER050C	ECM31	P38122	312 aa		0.69	□□□□□ -2.3
RSM18	YER050C	EST3	Q03096	181 aa		0.69	□□□□□ -2.3
RSM18	YER050C	YPR153W	Q06537	140 aa		0.69	□□□□□ -2.3
RSM18	YER050C	GPI11	Q06636	219 aa		0.69	□□□□□ -2.3
RSM18	YER050C	HSL1	P34244	1518 aa		0.69	□□□□□ -2.3
RSM18	YER050C	HYP2	P23301	157 aa	Known RBP	0.68	□□□□□ -2.3
RSM18	YER050C	SED1	Q01589	338 aa		0.68	□□□□□ -2.3
RSM18	YER050C	YPD1	Q07688	167 aa		0.68	□□□□□ -2.3
RSM18	YER050C	ARC19	P33204	171 aa	Known RBP	0.67	□□□□□ -2.3
RSM18	YER050C	RRT7	Q07829	113 aa		0.67	□□□□□ -2.3
RSM18	YER050C	RPL33A	P05744	107 aa	Known RBP	0.66	□□□□□ -2.3
RSM18	YER050C	YGR201C	P42936	225 aa		0.66	□□□□□ -2.3
RSM18	YER050C	GPI2	P46961	280 aa		0.66	□□□□□ -2.3
RSM18	YER050C	YCL001W-A	P87012	153 aa		0.66	□□□□□ -2.3
RSM18	YER050C	MGR2	Q02889	113 aa		0.66	□□□□□ -2.3
RSM18	YER050C	YMR320W	Q04897	101 aa		0.66	□□□□□ -2.3
RSM18	YER050C	YGL014C-A	P0C5N1	53 aa		0.65	□□□□□ -2.31
RSM18	YER050C	PET54	P10834	293 aa		0.65	□□□□□ -2.31
RSM18	YER050C	NHP6A	P11632	93 aa	Known RBP	0.65	□□□□□ -2.31
RSM18	YER050C	HSP12	P22943	109 aa	Known RBP	0.65	□□□□□ -2.31
RSM18	YER050C	FYV5	P25585	152 aa		0.64	□□□□□ -2.31
RSM18	YER050C	IPI1	P38803	334 aa	Predicted RBP	0.64	□□□□□ -2.31
RSM18	YER050C	YHR213W-B	Q8TGK1	99 aa		0.64	□□□□□ -2.31
RSM18	YER050C	HAP2	P06774	265 aa		0.63	□□□□□ -2.31
RSM18	YER050C	RPS1B	P23248	255 aa	Known RBP	0.63	□□□□□ -2.31
RSM18	YER050C	ATP19	P81451	68 aa		0.63	□□□□□ -2.31
RSM18	YER050C	RPS22A	P0C0W1	130 aa	Known RBP	0.62	□□□□□ -2.31
RSM18	YER050C	YMR122C	Q03879	124 aa		0.62	□□□□□ -2.31
RSM18	YER050C	SOM1	Q05676	74 aa		0.62	□□□□□ -2.31
RSM18	YER050C	RPS22B	Q3E7Y3	130 aa	Known RBP	0.62	□□□□□ -2.31
RSM18	YER050C	MHF1	Q3E835	90 aa		0.62	□□□□□ -2.31
RSM18	YER050C	PHB1	P40961	287 aa		0.61	□□□□□ -2.31
RSM18	YER050C	MOG1	P47123	218 aa		0.61	□□□□□ -2.31
RSM18	YER050C	PKR1	Q03880	122 aa	Known RBP	0.61	□□□□□ -2.31
RSM18	YER050C	RAV2	Q03956	351 aa		0.61	□□□□□ -2.31
RSM18	YER050C	YOR385W	Q08909	290 aa		0.61	□□□□□ -2.31
RSM18	YER050C	PRM3	Q08931	133 aa		0.61	□□□□□ -2.31
RSM18	YER050C	LAA1	P39526	2014 aa		0.6	□□□□□ -2.31
RSM18	YER050C	QCR6	P00127	147 aa		0.6	□□□□□ -2.31
RSM18	YER050C	LST8	P41318	303 aa		0.6	□□□□□ -2.31
RSM18	YER050C	YOR1	P53049	1477 aa		0.6	□□□□□ -2.31
RSM18	YER050C	GSC2	P40989	1895 aa		0.59	□□□□□ -2.31
RSM18	YER050C	URA2	P07259	2214 aa	Known RBP	0.59	□□□□□ -2.31
RSM18	YER050C	RPL40A	P0CH08	128 aa	Known RBP	0.59	□□□□□ -2.31
RSM18	YER050C	RPL40B	P0CH09	128 aa	Known RBP	0.59	□□□□□ -2.31
RSM18	YER050C	YOR072W	Q08486	104 aa		0.59	□□□□□ -2.31
RSM18	YER050C	HUT1	Q12520	339 aa		0.59	□□□□□ -2.31
RSM18	YER050C	DDP1	Q99321	188 aa	Known RBP	0.59	□□□□□ -2.31
RSM18	YER050C	SUI1	P32911	108 aa	Known RBP	0.58	□□□□□ -2.32
RSM18	YER050C	AIM4	P38305	123 aa	Predicted RBP	0.58	□□□□□ -2.32
RSM18	YER050C	VMA10	P48836	114 aa	Known RBP	0.58	□□□□□ -2.32
RSM18	YER050C	YNL019C	P53975	284 aa		0.58	□□□□□ -2.32
RSM18	YER050C	NMT1	P14743	455 aa		0.57	□□□□□ -2.32
RSM18	YER050C	TRS20	P38334	175 aa		0.57	□□□□□ -2.32
RSM18	YER050C	YMR141C	P40211	102 aa		0.57	□□□□□ -2.32
RSM18	YER050C	LSM1	P47017	172 aa	Known RBP	0.57	□□□□□ -2.32
RSM18	YER050C	FUN14	P18411	198 aa		0.56	□□□□□ -2.32
RSM18	YER050C	YHR140W	P38842	239 aa		0.56	□□□□□ -2.32
RSM18	YER050C	EFM5	P53200	248 aa	Known RBP	0.56	□□□□□ -2.32
RSM18	YER050C	COA4	Q05809	96 aa		0.56	□□□□□ -2.32
RSM18	YER050C	YHR213W	P0CI67	198 aa		0.55	□□□□□ -2.32
RSM18	YER050C	RPS1A	P33442	255 aa	Known RBP	0.55	□□□□□ -2.32
RSM18	YER050C	SRL3	P36167	246 aa		0.55	□□□□□ -2.32

Retrieved 100 of 5,963 RNA–protein pairs in 65.5 ms