RNA–Protein interactions for RNA: YER012W

PRE1, Transcript of Beta 4 subunit of the 20S proteasome, yeastyeast

Gene PRE1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE1YER012W HNT1Q04344 158 aaKnown RBP1.93□□□□□ -2.1
PRE1YER012W LPP1Q04396 274 aa1.93□□□□□ -2.1
PRE1YER012W CPT1P17898 393 aa1.92□□□□□ -2.1
PRE1YER012W YMR31P19955 123 aa1.92□□□□□ -2.1
PRE1YER012W UTR5P32630 166 aa1.92□□□□□ -2.1
PRE1YER012W SRL3P36167 246 aa1.92□□□□□ -2.1
PRE1YER012W ECM31P38122 312 aa1.92□□□□□ -2.1
PRE1YER012W POP8P38208 133 aa1.92□□□□□ -2.1
PRE1YER012W HPA3P39979 161 aa1.92□□□□□ -2.1
PRE1YER012W RFC2P40348 353 aa1.92□□□□□ -2.1
PRE1YER012W GVP36P40531 326 aaKnown RBP1.92□□□□□ -2.1
PRE1YER012W YAR1P46683 200 aa1.92□□□□□ -2.1
PRE1YER012W FMP41P53889 259 aaKnown RBP1.92□□□□□ -2.1
PRE1YER012W YDR274CP87283 123 aa1.92□□□□□ -2.1
PRE1YER012W ARC18Q05933 178 aaKnown RBP1.92□□□□□ -2.1
PRE1YER012W YOR283WQ12040 230 aaKnown RBP1.92□□□□□ -2.1
PRE1YER012W MSH5Q12175 901 aa1.92□□□□□ -2.1
PRE1YER012W URA5P13298 226 aaKnown RBP1.91□□□□□ -2.1
PRE1YER012W PET100P38958 111 aa1.91□□□□□ -2.1
PRE1YER012W SMB1P40018 196 aaKnown RBP1.91□□□□□ -2.1
PRE1YER012W FCY21P40039 528 aa1.91□□□□□ -2.1
PRE1YER012W YFR035CP43608 114 aa1.91□□□□□ -2.1
PRE1YER012W YJL144WP47009 104 aa1.91□□□□□ -2.1
PRE1YER012W TAD2P47058 250 aa1.91□□□□□ -2.1
PRE1YER012W YJL027CP47063 138 aaPredicted RBP1.91□□□□□ -2.1
PRE1YER012W SWT21P53873 357 aaPredicted RBP1.91□□□□□ -2.1
PRE1YER012W EST3Q03096 181 aa1.91□□□□□ -2.1
PRE1YER012W ATG39Q06159 398 aa1.91□□□□□ -2.1
PRE1YER012W CTR3Q06686 241 aa1.91□□□□□ -2.1
PRE1YER012W YOR385WQ08909 290 aa1.91□□□□□ -2.1
PRE1YER012W POC4Q12245 148 aaPredicted RBP1.91□□□□□ -2.1
PRE1YER012W MED4Q12343 284 aa1.91□□□□□ -2.1
PRE1YER012W PET20Q99373 253 aa1.91□□□□□ -2.1
PRE1YER012W YMR316C-AI2HB70 103 aa1.9□□□□□ -2.11
PRE1YER012W CUP2P15315 225 aa1.9□□□□□ -2.11
PRE1YER012W MIC12P38341 106 aa1.9□□□□□ -2.11
PRE1YER012W IRC18P47056 224 aa1.9□□□□□ -2.11
PRE1YER012W GRX3Q03835 250 aa1.9□□□□□ -2.11
PRE1YER012W PEX10Q05568 337 aa1.9□□□□□ -2.11
PRE1YER012W PRM3Q08931 133 aa1.9□□□□□ -2.11
PRE1YER012W YPL264CQ08980 353 aa1.9□□□□□ -2.11
PRE1YER012W AGC1Q12482 902 aa1.9□□□□□ -2.11
PRE1YER012W COA2Q3E823 68 aa1.9□□□□□ -2.11
PRE1YER012W SUS1Q6WNK7 96 aa1.9□□□□□ -2.11
PRE1YER012W YHR213WP0CI67 198 aa1.89□□□□□ -2.11
PRE1YER012W PET54P10834 293 aa1.89□□□□□ -2.11
PRE1YER012W SPT14P32363 452 aa1.89□□□□□ -2.11
PRE1YER012W TCA17P32613 152 aa1.89□□□□□ -2.11
PRE1YER012W PAN3P36102 679 aaPredicted RBP1.89□□□□□ -2.11
PRE1YER012W MIC26P50087 233 aa1.89□□□□□ -2.11
PRE1YER012W CAB4P53332 305 aa1.89□□□□□ -2.11
PRE1YER012W GTO3Q04806 366 aa1.89□□□□□ -2.11
PRE1YER012W SDO1Q07953 250 aaKnown RBP1.89□□□□□ -2.11
PRE1YER012W QCR2P07257 368 aa1.88□□□□□ -2.11
PRE1YER012W SDH4P37298 181 aa1.88□□□□□ -2.11
PRE1YER012W COS8P38723 381 aa1.88□□□□□ -2.11
PRE1YER012W IPI1P38803 334 aaPredicted RBP1.88□□□□□ -2.11
PRE1YER012W MPC2P38857 129 aa1.88□□□□□ -2.11
PRE1YER012W HUA1P40325 198 aa1.88□□□□□ -2.11
PRE1YER012W BMT5P40493 336 aa1.88□□□□□ -2.11
PRE1YER012W SER2P42941 309 aa1.88□□□□□ -2.11
PRE1YER012W AGX1P43567 385 aa1.88□□□□□ -2.11
PRE1YER012W YJR012CP47087 207 aa1.88□□□□□ -2.11
PRE1YER012W NIF3P53081 288 aa1.88□□□□□ -2.11
PRE1YER012W TIM21P53220 239 aa1.88□□□□□ -2.11
PRE1YER012W YGR050CP53231 118 aa1.88□□□□□ -2.11
PRE1YER012W TMA20P89886 181 aaPredicted RBP1.88□□□□□ -2.11
PRE1YER012W VPS28Q02767 242 aa1.88□□□□□ -2.11
PRE1YER012W FRQ1Q06389 190 aa1.88□□□□□ -2.11
PRE1YER012W HRD1Q08109 551 aa1.88□□□□□ -2.11
PRE1YER012W SCP1Q08873 200 aa1.88□□□□□ -2.11
PRE1YER012W ATG31Q12421 196 aa1.88□□□□□ -2.11
PRE1YER012W YOR011W-AQ3E807 68 aa1.88□□□□□ -2.11
PRE1YER012W YCR016WP25617 290 aaKnown RBP1.87□□□□□ -2.11
PRE1YER012W QRI5P32344 111 aa1.87□□□□□ -2.11
PRE1YER012W ALK2P32789 676 aaPredicted RBP1.87□□□□□ -2.11
PRE1YER012W YHR138CP38841 114 aaPredicted RBP1.87□□□□□ -2.11
PRE1YER012W YNL194CP40169 301 aa1.87□□□□□ -2.11
PRE1YER012W YKE4P40544 346 aa1.87□□□□□ -2.11
PRE1YER012W TDA4P47153 279 aa1.87□□□□□ -2.11
PRE1YER012W LSM7P53905 115 aaKnown RBP1.87□□□□□ -2.11
PRE1YER012W DXO1Q06349 442 aa1.87□□□□□ -2.11
PRE1YER012W SME1Q12330 94 aaPredicted RBP1.87□□□□□ -2.11
PRE1YER012W YGL258W-AQ3E740 77 aa1.87□□□□□ -2.11
PRE1YER012W HYM1P32464 399 aa1.86□□□□□ -2.11
PRE1YER012W SHB17P36136 271 aaKnown RBP1.86□□□□□ -2.11
PRE1YER012W LSM2P38203 95 aaKnown RBP1.86□□□□□ -2.11
PRE1YER012W FMP23P38231 175 aa1.86□□□□□ -2.11
PRE1YER012W NSA2P40078 261 aaKnown RBP1.86□□□□□ -2.11
PRE1YER012W YGR269WP40326 108 aa1.86□□□□□ -2.11
PRE1YER012W YFR045WP43617 309 aa1.86□□□□□ -2.11
PRE1YER012W IMP2P46972 177 aa1.86□□□□□ -2.11
PRE1YER012W COX12Q01519 83 aa1.86□□□□□ -2.11
PRE1YER012W RRT7Q07829 113 aa1.86□□□□□ -2.11
PRE1YER012W YOL160WQ08321 113 aa1.86□□□□□ -2.11
PRE1YER012W YBL112CQ3E7Y4 105 aa1.86□□□□□ -2.11
PRE1YER012W NHP6BP11633 99 aaKnown RBP1.85□□□□□ -2.11
PRE1YER012W SEC22P22214 214 aa1.85□□□□□ -2.11
PRE1YER012W UTP11P34247 250 aaPredicted RBP1.85□□□□□ -2.11
PRE1YER012W DOG2P38773 246 aa1.85□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 93.1 ms