RNA–Protein interactions for RNA: YER008C

SEC3, Transcript of Subunit of the exocyst complex, yeastyeast

Gene SEC3, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC3YER008C CGI121Q03705 181 aaKnown RBP0.82□□□□□ -2.28
SEC3YER008C YMR253CQ04835 414 aa0.82□□□□□ -2.28
SEC3YER008C ATP20Q12233 115 aa0.82□□□□□ -2.28
SEC3YER008C SLO1Q3E784 85 aa0.82□□□□□ -2.28
SEC3YER008C YDL085C-AQ3E7B7 68 aaKnown RBP0.82□□□□□ -2.28
SEC3YER008C YIL046W-AQ3E7Z4 54 aa0.82□□□□□ -2.28
SEC3YER008C DDI2P0CH63 225 aa0.81□□□□□ -2.28
SEC3YER008C DDI3P0CH64 225 aa0.81□□□□□ -2.28
SEC3YER008C MRS4P23500 304 aa0.81□□□□□ -2.28
SEC3YER008C SRP21P32342 167 aa0.81□□□□□ -2.28
SEC3YER008C YKR032WP36127 104 aa0.81□□□□□ -2.28
SEC3YER008C AIM2P39721 246 aa0.81□□□□□ -2.28
SEC3YER008C YIL059CP40520 121 aa0.81□□□□□ -2.28
SEC3YER008C SKI6P46948 246 aaPredicted RBP0.81□□□□□ -2.28
SEC3YER008C APS3P47064 194 aa0.81□□□□□ -2.28
SEC3YER008C HPT1Q04178 221 aaKnown RBP0.81□□□□□ -2.28
SEC3YER008C LDB18Q07887 179 aa0.81□□□□□ -2.28
SEC3YER008C SMT3Q12306 101 aaKnown RBP0.81□□□□□ -2.28
SEC3YER008C YOR376W-AQ3E805 51 aa0.81□□□□□ -2.28
SEC3YER008C ISD11Q6Q560 94 aa0.81□□□□□ -2.28
SEC3YER008C HIS3P06633 220 aa0.81□□□□□ -2.28
SEC3YER008C PHO13P19881 312 aa0.81□□□□□ -2.28
SEC3YER008C RPS1BP23248 255 aaKnown RBP0.81□□□□□ -2.28
SEC3YER008C HTD2P38790 280 aaKnown RBP0.81□□□□□ -2.28
SEC3YER008C YHR180WP38868 163 aa0.81□□□□□ -2.28
SEC3YER008C YEL067CP39978 195 aa0.81□□□□□ -2.28
SEC3YER008C BUD13P46947 266 aaPredicted RBP0.81□□□□□ -2.28
SEC3YER008C AIM36Q03798 255 aa0.81□□□□□ -2.28
SEC3YER008C CSN9Q03981 162 aa0.81□□□□□ -2.28
SEC3YER008C MEU1Q07938 337 aaKnown RBP RIP-Chip data0.81□□□□□ -2.28not detected
SEC3YER008C YPR014CQ6B0W2 109 aa0.81□□□□□ -2.28
SEC3YER008C FMP27Q06179 2628 aa0.81□□□□□ -2.28
SEC3YER008C FAS1P07149 2051 aaKnown RBP0.81□□□□□ -2.28
SEC3YER008C URA5P13298 226 aaKnown RBP0.81□□□□□ -2.28
SEC3YER008C CCA1P21269 546 aa0.81□□□□□ -2.28
SEC3YER008C SRL3P36167 246 aa0.81□□□□□ -2.28
SEC3YER008C NSG1P38837 291 aa0.81□□□□□ -2.28
SEC3YER008C ARC15P40518 154 aaRIP-Chip data0.81□□□□□ -2.28not detected
SEC3YER008C CIN5P40917 295 aa0.81□□□□□ -2.28
SEC3YER008C YNR062CP53748 327 aa0.81□□□□□ -2.28
SEC3YER008C UPS1Q05776 175 aa0.81□□□□□ -2.28
SEC3YER008C PRM7Q12459 698 aa0.81□□□□□ -2.28
SEC3YER008C YLR099W-AQ3E798 87 aa0.81□□□□□ -2.28
SEC3YER008C RAS2P01120 322 aaKnown RBP0.8□□□□□ -2.28
SEC3YER008C LHP1P33399 275 aaKnown RBP0.8□□□□□ -2.28
SEC3YER008C AYR1P40471 297 aa0.8□□□□□ -2.28
SEC3YER008C YFR045WP43617 309 aa0.8□□□□□ -2.28
SEC3YER008C COF1Q03048 143 aaKnown RBP0.8□□□□□ -2.28
SEC3YER008C TMA23Q03525 211 aa0.8□□□□□ -2.28
SEC3YER008C IRC23Q08416 157 aa0.8□□□□□ -2.28
SEC3YER008C FSF1Q12029 327 aaKnown RBP0.8□□□□□ -2.28
SEC3YER008C FCY1Q12178 158 aa0.8□□□□□ -2.28
SEC3YER008C RRT1P38192 103 aa0.8□□□□□ -2.28
SEC3YER008C YHI9P38765 294 aa0.8□□□□□ -2.28
SEC3YER008C GPI2P46961 280 aa0.8□□□□□ -2.28
SEC3YER008C HHO1P53551 258 aa0.8□□□□□ -2.28
SEC3YER008C AVO2Q04749 426 aa0.8□□□□□ -2.28
SEC3YER008C ANT1Q06497 328 aa0.8□□□□□ -2.28
SEC3YER008C YNL277W-AQ3E7Z0 62 aa0.8□□□□□ -2.28
SEC3YER008C YPR117WQ06116 2489 aa0.8□□□□□ -2.28
SEC3YER008C HYM1P32464 399 aa0.8□□□□□ -2.28
SEC3YER008C UTP11P34247 250 aaPredicted RBP0.8□□□□□ -2.28
SEC3YER008C MRPL24P36525 258 aaPredicted RBP0.8□□□□□ -2.28
SEC3YER008C SPC25P40014 221 aa0.8□□□□□ -2.28
SEC3YER008C GVP36P40531 326 aaKnown RBP0.8□□□□□ -2.28
SEC3YER008C BAT2P47176 376 aaKnown RBP0.8□□□□□ -2.28
SEC3YER008C YNL033WP53964 284 aa0.8□□□□□ -2.28
SEC3YER008C RNH202Q05635 350 aa0.8□□□□□ -2.28
SEC3YER008C CSI2Q08054 341 aa0.8□□□□□ -2.28
SEC3YER008C YIR021W-AQ3E739 70 aa0.8□□□□□ -2.28
SEC3YER008C BOL1Q3E793 110 aa0.8□□□□□ -2.28
SEC3YER008C SAS5Q99314 248 aa0.8□□□□□ -2.28
SEC3YER008C FMP49A0A023PZB3 126 aa0.8□□□□□ -2.28
SEC3YER008C HAP2P06774 265 aa0.8□□□□□ -2.28
SEC3YER008C AGA2P32781 87 aa0.8□□□□□ -2.28
SEC3YER008C FMT1P32785 401 aa0.8□□□□□ -2.28
SEC3YER008C SUI1P32911 108 aaKnown RBP0.8□□□□□ -2.28
SEC3YER008C SNC2P33328 115 aa0.8□□□□□ -2.28
SEC3YER008C RPL14AP36105 138 aaKnown RBP0.8□□□□□ -2.28
SEC3YER008C RPL14BP38754 138 aaKnown RBP0.8□□□□□ -2.28
SEC3YER008C YER181CP40097 107 aa0.8□□□□□ -2.28
SEC3YER008C PHB1P40961 287 aa0.8□□□□□ -2.28
SEC3YER008C TDA4P47153 279 aa0.8□□□□□ -2.28
SEC3YER008C RBL2P48606 106 aaKnown RBP0.8□□□□□ -2.28
SEC3YER008C YMR252CQ04814 134 aa0.8□□□□□ -2.28
SEC3YER008C PBI2P0CT04 75 aaKnown RBP0.79□□□□□ -2.28
SEC3YER008C KRE1P17260 313 aa0.79□□□□□ -2.28
SEC3YER008C UTR5P32630 166 aa0.79□□□□□ -2.28
SEC3YER008C COS8P38723 381 aa0.79□□□□□ -2.28
SEC3YER008C DLS1P40366 167 aa0.79□□□□□ -2.28
SEC3YER008C IGO1P53897 168 aa0.79□□□□□ -2.28
SEC3YER008C SYM1Q06563 197 aa0.79□□□□□ -2.28
SEC3YER008C YOR214CQ12282 236 aa0.79□□□□□ -2.28
SEC3YER008C YLR118CQ12354 227 aa0.79□□□□□ -2.28
SEC3YER008C ADK1P07170 222 aaKnown RBP0.79□□□□□ -2.28
SEC3YER008C YOL162WP0CF19 215 aa0.79□□□□□ -2.28
SEC3YER008C PGD1P40356 397 aa0.79□□□□□ -2.28
SEC3YER008C MOB1P40484 314 aa0.79□□□□□ -2.28
SEC3YER008C FRQ1Q06389 190 aa0.79□□□□□ -2.28
SEC3YER008C AHT1P29589 182 aa0.79□□□□□ -2.28
Retrieved 100 of 5,963 RNA–protein pairs in 118.1 ms