RNA–Protein interactions for RNA: YDR322W

MRPL35, Transcript of Mitochondrial ribosomal protein of the large subunit, yeast

Gene MRPL35, Length 1,104 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MRPL35	YDR322W	YER135C	P40082	130 aa		4.94	□□□□□ -1.62
MRPL35	YDR322W	SPI1	P40092	148 aa		4.94	□□□□□ -1.62
MRPL35	YDR322W	YIL077C	P40508	320 aa		4.94	□□□□□ -1.62
MRPL35	YDR322W	YJR096W	P47137	282 aa		4.94	□□□□□ -1.62
MRPL35	YDR322W	YJR111C	P47148	283 aa	Known RBP	4.94	□□□□□ -1.62
MRPL35	YDR322W	YNR066C	P53752	436 aa		4.94	□□□□□ -1.62
MRPL35	YDR322W	CAF40	P53829	373 aa		4.94	□□□□□ -1.62
MRPL35	YDR322W	MRX11	Q03079	207 aa		4.94	□□□□□ -1.62
MRPL35	YDR322W	ANT1	Q06497	328 aa		4.94	□□□□□ -1.62
MRPL35	YDR322W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.93	□□□□□ -1.62	not detected
MRPL35	YDR322W	TIR2	P33890	251 aa		4.93	□□□□□ -1.62
MRPL35	YDR322W	DER1	P38307	211 aa		4.93	□□□□□ -1.62
MRPL35	YDR322W	MCM22	P47167	239 aa		4.93	□□□□□ -1.62
MRPL35	YDR322W	YGR025W	P53216	100 aa		4.93	□□□□□ -1.62
MRPL35	YDR322W	MRPL50	P53724	139 aa		4.93	□□□□□ -1.62
MRPL35	YDR322W	AVO2	Q04749	426 aa		4.93	□□□□□ -1.62
MRPL35	YDR322W	RPP2A	P05319	106 aa	Known RBP	4.92	□□□□□ -1.62
MRPL35	YDR322W	SAR1	P20606	190 aa	Known RBP	4.92	□□□□□ -1.62
MRPL35	YDR322W	ASP1	P38986	381 aa	Predicted RBP	4.92	□□□□□ -1.62
MRPL35	YDR322W	SRB7	P47822	140 aa		4.92	□□□□□ -1.62
MRPL35	YDR322W	YGL117W	P53133	265 aa		4.92	□□□□□ -1.62
MRPL35	YDR322W	ATC1	Q04005	294 aa		4.92	□□□□□ -1.62
MRPL35	YDR322W	CTR3	Q06686	241 aa		4.92	□□□□□ -1.62
MRPL35	YDR322W	MRPL20	P22354	195 aa	Predicted RBP	4.91	□□□□□ -1.62
MRPL35	YDR322W	YBR292C	P38357	123 aa		4.91	□□□□□ -1.62
MRPL35	YDR322W	YHR022C	P38763	256 aa		4.91	□□□□□ -1.62
MRPL35	YDR322W	PRE5	P40302	234 aa	Known RBP	4.91	□□□□□ -1.62
MRPL35	YDR322W	VHS2	P40463	436 aa		4.91	□□□□□ -1.62
MRPL35	YDR322W	TAD2	P47058	250 aa		4.91	□□□□□ -1.62
MRPL35	YDR322W	SGF11	Q03067	99 aa		4.91	□□□□□ -1.62
MRPL35	YDR322W	MRPS17	Q03246	237 aa	Predicted RBP	4.91	□□□□□ -1.62
MRPL35	YDR322W	YMR007W	Q03675	126 aa		4.91	□□□□□ -1.62
MRPL35	YDR322W	MRS1	P07266	363 aa		4.9	□□□□□ -1.63
MRPL35	YDR322W	UBI4	P0CG63	381 aa	Known RBP	4.9	□□□□□ -1.63
MRPL35	YDR322W	HSP12	P22943	109 aa	Known RBP	4.9	□□□□□ -1.63
MRPL35	YDR322W	CDC50	P25656	391 aa		4.9	□□□□□ -1.63
MRPL35	YDR322W	AFR1	P33304	620 aa		4.9	□□□□□ -1.63
MRPL35	YDR322W	MBB1	P39534	108 aa		4.9	□□□□□ -1.63
MRPL35	YDR322W	GCV3	P39726	170 aa	Predicted RBP	4.9	□□□□□ -1.63
MRPL35	YDR322W	FMP41	P53889	259 aa	Known RBP	4.9	□□□□□ -1.63
MRPL35	YDR322W	HAL1	Q01766	294 aa		4.9	□□□□□ -1.63
MRPL35	YDR322W	FIT2	Q08906	153 aa		4.9	□□□□□ -1.63
MRPL35	YDR322W	ERV2	Q12284	196 aa		4.9	□□□□□ -1.63
MRPL35	YDR322W	VAR1	P02381	398 aa		4.89	□□□□□ -1.63
MRPL35	YDR322W	GCN3	P14741	305 aa		4.89	□□□□□ -1.63
MRPL35	YDR322W	CPT1	P17898	393 aa		4.89	□□□□□ -1.63
MRPL35	YDR322W	SMD3	P43321	101 aa	Known RBP	4.89	□□□□□ -1.63
MRPL35	YDR322W	SNO1	Q03144	224 aa		4.89	□□□□□ -1.63
MRPL35	YDR322W	FCF2	Q12035	217 aa	Predicted RBP	4.89	□□□□□ -1.63
MRPL35	YDR322W	TMA17	Q12513	150 aa		4.89	□□□□□ -1.63
MRPL35	YDR322W	RPB3	P16370	318 aa	Known RBP	4.88	□□□□□ -1.63
MRPL35	YDR322W	VMA16	P23968	213 aa		4.88	□□□□□ -1.63
MRPL35	YDR322W	SPC25	P40014	221 aa		4.88	□□□□□ -1.63
MRPL35	YDR322W	ORM2	Q06144	216 aa		4.88	□□□□□ -1.63
MRPL35	YDR322W	YBR126W-A	Q8TGU7	68 aa		4.88	□□□□□ -1.63
MRPL35	YDR322W	HTB2	P02294	131 aa		4.87	□□□□□ -1.63
MRPL35	YDR322W	MAG1	P22134	296 aa	Known RBP	4.87	□□□□□ -1.63
MRPL35	YDR322W	SPO13	P23624	291 aa		4.87	□□□□□ -1.63
MRPL35	YDR322W	DSK2	P48510	373 aa		4.87	□□□□□ -1.63
MRPL35	YDR322W	TMA23	Q03525	211 aa		4.87	□□□□□ -1.63
MRPL35	YDR322W	YHR173C	P38864	112 aa		4.86	□□□□□ -1.63
MRPL35	YDR322W	RPR2	P40571	144 aa		4.86	□□□□□ -1.63
MRPL35	YDR322W	YCH1	P42937	148 aa		4.86	□□□□□ -1.63
MRPL35	YDR322W	YCL001W-A	P87012	153 aa		4.86	□□□□□ -1.63
MRPL35	YDR322W	UTP23	Q12339	254 aa	Known RBP	4.86	□□□□□ -1.63
MRPL35	YDR322W	YCR075W-A	Q3E830	75 aa		4.86	□□□□□ -1.63
MRPL35	YDR322W	AME1	P38313	324 aa		4.85	□□□□□ -1.63
MRPL35	YDR322W	YGL185C	P53100	379 aa		4.85	□□□□□ -1.63
MRPL35	YDR322W	YMR253C	Q04835	414 aa		4.85	□□□□□ -1.63
MRPL35	YDR322W	YGL194C-A	Q2V2P6	80 aa		4.85	□□□□□ -1.63
MRPL35	YDR322W	RNA15	P25299	296 aa	Predicted RBP	4.84	□□□□□ -1.63
MRPL35	YDR322W	YCR001W	P25347	104 aa		4.84	□□□□□ -1.63
MRPL35	YDR322W	MRPL4	P36517	319 aa		4.84	□□□□□ -1.63
MRPL35	YDR322W	TRS20	P38334	175 aa		4.84	□□□□□ -1.63
MRPL35	YDR322W	COX16	P47081	118 aa		4.84	□□□□□ -1.63
MRPL35	YDR322W	ELF1	P36053	145 aa		4.83	□□□□□ -1.64
MRPL35	YDR322W	SHG1	P38337	142 aa		4.83	□□□□□ -1.64
MRPL35	YDR322W	LOC1	P43586	204 aa	Predicted RBP	4.83	□□□□□ -1.64
MRPL35	YDR322W	YDR366C	P87287	132 aa		4.83	□□□□□ -1.64
MRPL35	YDR322W	COX19	Q3E731	98 aa		4.83	□□□□□ -1.64
MRPL35	YDR322W	YGR240C-A	Q3E786	66 aa		4.83	□□□□□ -1.64
MRPL35	YDR322W	YLR342W-A	Q3E810	57 aa		4.83	□□□□□ -1.64
MRPL35	YDR322W	RPS2	P25443	254 aa	Known RBP	4.82	□□□□□ -1.64
MRPL35	YDR322W	URM1	P40554	99 aa	Predicted RBP	4.82	□□□□□ -1.64
MRPL35	YDR322W	BRP1	P53194	125 aa		4.82	□□□□□ -1.64
MRPL35	YDR322W	PAU4	P53427	120 aa		4.82	□□□□□ -1.64
MRPL35	YDR322W	YOR015W	Q12169	119 aa		4.82	□□□□□ -1.64
MRPL35	YDR322W	EMC5	P40540	141 aa		4.81	□□□□□ -1.64
MRPL35	YDR322W	PHO23	P50947	330 aa		4.81	□□□□□ -1.64
MRPL35	YDR322W	YPS5	P53057	165 aa		4.81	□□□□□ -1.64
MRPL35	YDR322W	ADD37	Q03233	198 aa		4.81	□□□□□ -1.64
MRPL35	YDR322W	YLR125W	Q12138	136 aa		4.81	□□□□□ -1.64
MRPL35	YDR322W	RPL31B	P0C2H9	113 aa	Known RBP	4.8	□□□□□ -1.64
MRPL35	YDR322W	MRP2	P10663	115 aa	Predicted RBP	4.8	□□□□□ -1.64
MRPL35	YDR322W	CYB5	P40312	120 aa		4.8	□□□□□ -1.64
MRPL35	YDR322W	TIM21	P53220	239 aa		4.8	□□□□□ -1.64
MRPL35	YDR322W	GIS2	P53849	153 aa	Known RBP RIP-Chip data	4.8	□□□□□ -1.64	not detected
MRPL35	YDR322W	RAV2	Q03956	351 aa		4.8	□□□□□ -1.64
MRPL35	YDR322W	RPS22A	P0C0W1	130 aa	Known RBP	4.79	□□□□□ -1.64
MRPL35	YDR322W	PAU1	P0CE88	120 aa		4.79	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 40.5 ms