RNA–Protein interactions for RNA: YDR308C

SRB7, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene SRB7, Length 423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRB7YDR308C UBI4P0CG63 381 aaKnown RBP0.69□□□□□ -2.3
SRB7YDR308C IPT1P38954 527 aa0.69□□□□□ -2.3
SRB7YDR308C YER121WP40076 114 aa0.69□□□□□ -2.3
SRB7YDR308C ORM1P53224 222 aa0.69□□□□□ -2.3
SRB7YDR308C YLR053CQ12026 108 aa0.69□□□□□ -2.3
SRB7YDR308C RPS22BQ3E7Y3 130 aaKnown RBP0.69□□□□□ -2.3
SRB7YDR308C RPL30P14120 105 aaKnown RBP0.68□□□□□ -2.3
SRB7YDR308C RCF2P53721 224 aa0.68□□□□□ -2.3
SRB7YDR308C RDI1Q12434 202 aa0.68□□□□□ -2.3
SRB7YDR308C CMC2Q3E7A4 109 aa0.68□□□□□ -2.3
SRB7YDR308C DLS1P40366 167 aa0.67□□□□□ -2.3
SRB7YDR308C QCR2P07257 368 aa0.66□□□□□ -2.3
SRB7YDR308C PEX34P25584 144 aa0.66□□□□□ -2.3
SRB7YDR308C PRM3Q08931 133 aa0.66□□□□□ -2.3
SRB7YDR308C YPR153WQ06537 140 aa0.65□□□□□ -2.31
SRB7YDR308C CDC39P25655 2108 aaKnown RBP0.65□□□□□ -2.31
SRB7YDR308C RPS28BP0C0X0 67 aaKnown RBP0.64□□□□□ -2.31
SRB7YDR308C MRS4P23500 304 aa0.64□□□□□ -2.31
SRB7YDR308C ATG8P38182 117 aaRIP-Chip data0.64□□□□□ -2.31not detected
SRB7YDR308C ATP19P81451 68 aa0.64□□□□□ -2.31
SRB7YDR308C RRT7Q07829 113 aa0.64□□□□□ -2.31
SRB7YDR308C YPR202WQ08993 238 aa0.64□□□□□ -2.31
SRB7YDR308C RPS28AQ3E7X9 67 aaPredicted RBP0.64□□□□□ -2.31
SRB7YDR308C APQ12P40532 138 aa0.63□□□□□ -2.31
SRB7YDR308C FIP1P45976 327 aa0.63□□□□□ -2.31
SRB7YDR308C YJL009WP47078 108 aa0.63□□□□□ -2.31
SRB7YDR308C YPD1Q07688 167 aa0.63□□□□□ -2.31
SRB7YDR308C IRC19Q07843 230 aa0.63□□□□□ -2.31
SRB7YDR308C RFU1Q08003 200 aa0.63□□□□□ -2.31
SRB7YDR308C RPL33AP05744 107 aaKnown RBP0.62□□□□□ -2.31
SRB7YDR308C PBI2P0CT04 75 aaKnown RBP0.62□□□□□ -2.31
SRB7YDR308C BUB2P26448 306 aaPredicted RBP0.62□□□□□ -2.31
SRB7YDR308C SRL3P36167 246 aa0.61□□□□□ -2.31
SRB7YDR308C SLM6P38343 150 aa0.61□□□□□ -2.31
SRB7YDR308C SRP21P32342 167 aa0.6□□□□□ -2.31
SRB7YDR308C YMR141CP40211 102 aa0.6□□□□□ -2.31
SRB7YDR308C GPI11Q06636 219 aa0.6□□□□□ -2.31
SRB7YDR308C UBR1P19812 1950 aa0.59□□□□□ -2.31
SRB7YDR308C NHP6AP11632 93 aaKnown RBP0.59□□□□□ -2.31
SRB7YDR308C GPI2P46961 280 aa0.59□□□□□ -2.31
SRB7YDR308C IRC21Q04772 201 aa0.59□□□□□ -2.31
SRB7YDR308C PHO13P19881 312 aa0.58□□□□□ -2.32
SRB7YDR308C AME1P38313 324 aa0.58□□□□□ -2.32
SRB7YDR308C SEN15Q04675 128 aa0.58□□□□□ -2.32
SRB7YDR308C RIB3Q99258 208 aa0.58□□□□□ -2.32
SRB7YDR308C YER181CP40097 107 aa0.57□□□□□ -2.32
SRB7YDR308C YJL218WP40892 196 aaKnown RBP0.57□□□□□ -2.32
SRB7YDR308C HUT1Q12520 339 aa0.57□□□□□ -2.32
SRB7YDR308C RPL43AP0CX25 92 aaKnown RBP0.56□□□□□ -2.32
SRB7YDR308C RPL43BP0CX26 92 aa0.56□□□□□ -2.32
SRB7YDR308C MRPL24P36525 258 aaPredicted RBP0.56□□□□□ -2.32
SRB7YDR308C EST3Q03096 181 aa0.54□□□□□ -2.32
SRB7YDR308C SCS22Q6Q595 175 aa0.54□□□□□ -2.32
SRB7YDR308C YGL014C-AP0C5N1 53 aa0.53□□□□□ -2.32
SRB7YDR308C VMA10P48836 114 aaKnown RBP0.53□□□□□ -2.32
SRB7YDR308C YLR307C-AQ3E825 87 aa0.53□□□□□ -2.32
SRB7YDR308C DER1P38307 211 aa0.52□□□□□ -2.33
SRB7YDR308C YHR140WP38842 239 aa0.52□□□□□ -2.33
SRB7YDR308C DIE2P50076 525 aa0.52□□□□□ -2.33
SRB7YDR308C NSL1Q12143 216 aa0.52□□□□□ -2.33
SRB7YDR308C EFG1Q3E705 233 aaKnown RBP0.52□□□□□ -2.33
SRB7YDR308C DDR48P18899 430 aaKnown RBP0.51□□□□□ -2.33
SRB7YDR308C MHF1Q3E835 90 aa0.51□□□□□ -2.33
SRB7YDR308C COA6Q3E846 104 aa0.51□□□□□ -2.33
SRB7YDR308C YMR122CQ03879 124 aa0.5□□□□□ -2.33
SRB7YDR308C COX5BP00425 151 aa0.49□□□□□ -2.33
SRB7YDR308C YLR157W-EP0CF00 54 aa0.48□□□□□ -2.33
SRB7YDR308C RME1P32338 300 aaKnown RBP0.47□□□□□ -2.33
SRB7YDR308C LST8P41318 303 aa0.47□□□□□ -2.33
SRB7YDR308C ANB1P19211 157 aa0.46□□□□□ -2.34
SRB7YDR308C FYV5P25585 152 aa0.46□□□□□ -2.34
SRB7YDR308C MVB12P42939 101 aa0.46□□□□□ -2.34
SRB7YDR308C YNL019CP53975 284 aa0.46□□□□□ -2.34
SRB7YDR308C FIT3Q08907 204 aa0.46□□□□□ -2.34
SRB7YDR308C KTI11Q3E840 82 aa0.46□□□□□ -2.34
SRB7YDR308C HSP12P22943 109 aaKnown RBP0.45□□□□□ -2.34
SRB7YDR308C RAV2Q03956 351 aa0.45□□□□□ -2.34
SRB7YDR308C RAF1Q06891 181 aa0.45□□□□□ -2.34
SRB7YDR308C YOR034C-AQ3E735 80 aa0.45□□□□□ -2.34
SRB7YDR308C RPS1BP23248 255 aaKnown RBP0.44□□□□□ -2.34
SRB7YDR308C FIG1P38224 298 aa0.44□□□□□ -2.34
SRB7YDR308C SOM1Q05676 74 aa0.44□□□□□ -2.34
SRB7YDR308C DDP1Q99321 188 aaKnown RBP0.44□□□□□ -2.34
SRB7YDR308C PET20Q99373 253 aa0.44□□□□□ -2.34
SRB7YDR308C YCL001W-AP87012 153 aa0.43□□□□□ -2.34
SRB7YDR308C HUG1Q6Q5K6 68 aa0.43□□□□□ -2.34
SRB7YDR308C LAA1P39526 2014 aa0.42□□□□□ -2.34
SRB7YDR308C YHR213WP0CI67 198 aa0.42□□□□□ -2.34
SRB7YDR308C NMT1P14743 455 aa0.42□□□□□ -2.34
SRB7YDR308C IPI1P38803 334 aaPredicted RBP0.42□□□□□ -2.34
SRB7YDR308C YMR321CQ04898 105 aa0.42□□□□□ -2.34
SRB7YDR308C COA4Q05809 96 aa0.42□□□□□ -2.34
SRB7YDR308C FUN14P18411 198 aa0.41□□□□□ -2.34
SRB7YDR308C SUI1P32911 108 aaKnown RBP0.41□□□□□ -2.34
SRB7YDR308C NAT5Q08689 176 aa0.41□□□□□ -2.34
SRB7YDR308C PHB1P40961 287 aa0.4□□□□□ -2.35
SRB7YDR308C LSM1P47017 172 aaKnown RBP0.39□□□□□ -2.35
SRB7YDR308C TLG1Q03322 224 aa0.39□□□□□ -2.35
SRB7YDR308C YOR1P53049 1477 aa0.39□□□□□ -2.35
SRB7YDR308C URA2P07259 2214 aaKnown RBP0.38□□□□□ -2.35
Retrieved 100 of 5,963 RNA–protein pairs in 35.6 ms