RNA–Protein interactions for RNA: YDR110W

FOB1, Transcript of Nucleolar protein that binds the rDNA replication fork barrier site, yeastyeast

Gene FOB1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FOB1YDR110W YGR026WP53217 278 aa4.44□□□□□ -1.7
FOB1YDR110W EMI1Q04406 187 aa4.44□□□□□ -1.7
FOB1YDR110W YLR112WQ12130 139 aa4.44□□□□□ -1.7
FOB1YDR110W YDR215CQ12240 137 aa4.44□□□□□ -1.7
FOB1YDR110W PST1Q12355 444 aa4.44□□□□□ -1.7
FOB1YDR110W YOR376W-AQ3E805 51 aa4.44□□□□□ -1.7
FOB1YDR110W YML100W-AQ8TGT0 57 aa4.44□□□□□ -1.7
FOB1YDR110W LDS1P31379 325 aa4.43□□□□□ -1.7
FOB1YDR110W FYV4P38783 130 aaPredicted RBP4.43□□□□□ -1.7
FOB1YDR110W IPT1P38954 527 aa4.43□□□□□ -1.7
FOB1YDR110W YER134CP40081 178 aa4.43□□□□□ -1.7
FOB1YDR110W RPL13BP40212 199 aaKnown RBP4.43□□□□□ -1.7
FOB1YDR110W YIL012WP40551 113 aa4.43□□□□□ -1.7
FOB1YDR110W SYS1P41544 203 aa4.43□□□□□ -1.7
FOB1YDR110W YPL067CQ02754 198 aa4.43□□□□□ -1.7
FOB1YDR110W PIR3Q03180 325 aa4.43□□□□□ -1.7
FOB1YDR110W SWC7Q06707 132 aa4.43□□□□□ -1.7
FOB1YDR110W RPL13AQ12690 199 aaPredicted RBP4.43□□□□□ -1.7
FOB1YDR110W CPA1P07258 411 aaKnown RBP4.43□□□□□ -1.7
FOB1YDR110W HMRA1P0CY11 126 aa4.43□□□□□ -1.7
FOB1YDR110W RPB3P16370 318 aaKnown RBP4.43□□□□□ -1.7
FOB1YDR110W HTD2P38790 280 aaKnown RBP4.43□□□□□ -1.7
FOB1YDR110W SPO73P40031 143 aa4.43□□□□□ -1.7
FOB1YDR110W YFR045WP43617 309 aa4.43□□□□□ -1.7
FOB1YDR110W PGU1P47180 361 aa4.43□□□□□ -1.7
FOB1YDR110W YGR164WP53291 111 aa4.43□□□□□ -1.7
FOB1YDR110W TDA7P53882 636 aaPredicted RBP4.43□□□□□ -1.7
FOB1YDR110W TIM22Q12328 207 aa4.43□□□□□ -1.7
FOB1YDR110W YPR170W-BP0C5R9 85 aa4.42□□□□□ -1.7
FOB1YDR110W CDC43P18898 376 aa4.42□□□□□ -1.7
FOB1YDR110W RPB5P20434 215 aa4.42□□□□□ -1.7
FOB1YDR110W MSA2P36157 363 aa4.42□□□□□ -1.7
FOB1YDR110W YBR013CP38215 129 aa4.42□□□□□ -1.7
FOB1YDR110W HPA3P39979 161 aa4.42□□□□□ -1.7
FOB1YDR110W MED11Q99278 115 aa4.42□□□□□ -1.7
FOB1YDR110W PUB1P32588 453 aaKnown RBP RIP-Chip data4.41□□□□□ -1.7not detected
FOB1YDR110W CLB6P32943 380 aa4.41□□□□□ -1.7
FOB1YDR110W ANT1Q06497 328 aa4.41□□□□□ -1.7
FOB1YDR110W YPR174CQ06616 221 aaPredicted RBP4.41□□□□□ -1.7
FOB1YDR110W FYV12Q08559 129 aa4.41□□□□□ -1.7
FOB1YDR110W YLR111WQ12528 110 aa4.41□□□□□ -1.7
FOB1YDR110W YPL039WQ03080 316 aa4.41□□□□□ -1.7
FOB1YDR110W FSH2Q05015 223 aa4.41□□□□□ -1.7
FOB1YDR110W YLR122CQ12312 125 aa4.41□□□□□ -1.7
FOB1YDR110W YHR213W-AQ8TGT4 77 aa4.41□□□□□ -1.7
FOB1YDR110W MSW1P04803 379 aa4.4□□□□□ -1.71
FOB1YDR110W YFR010W-AP0C5N0 62 aa4.4□□□□□ -1.71
FOB1YDR110W DDR48P18899 430 aaKnown RBP4.4□□□□□ -1.71
FOB1YDR110W YCR050CP25630 102 aa4.4□□□□□ -1.71
FOB1YDR110W FMT1P32785 401 aa4.4□□□□□ -1.71
FOB1YDR110W MIX23P38162 196 aa4.4□□□□□ -1.71
FOB1YDR110W OM14P38325 134 aa4.4□□□□□ -1.71
FOB1YDR110W VTC1P40046 129 aaRIP-Chip data4.4□□□□□ -1.71not detected
FOB1YDR110W HRT1Q08273 121 aa4.4□□□□□ -1.71
FOB1YDR110W COX5BP00425 151 aa4.39□□□□□ -1.71
FOB1YDR110W NOP1P15646 327 aaKnown RBP4.39□□□□□ -1.71
FOB1YDR110W STF2P16965 84 aa4.39□□□□□ -1.71
FOB1YDR110W ATP15P21306 62 aa4.39□□□□□ -1.71
FOB1YDR110W NSA2P40078 261 aaKnown RBP4.39□□□□□ -1.71
FOB1YDR110W ERG25P53045 309 aa4.39□□□□□ -1.71
FOB1YDR110W FIT3Q08907 204 aa4.39□□□□□ -1.71
FOB1YDR110W YDR029WQ12111 104 aa4.39□□□□□ -1.71
FOB1YDR110W BET1P22804 142 aa4.38□□□□□ -1.71
FOB1YDR110W ERG2P32352 222 aa4.38□□□□□ -1.71
FOB1YDR110W PHO89P38361 574 aa4.38□□□□□ -1.71
FOB1YDR110W YJL028WP47062 111 aa4.38□□□□□ -1.71
FOB1YDR110W YMR082CQ04276 118 aa4.38□□□□□ -1.71
FOB1YDR110W FIT1Q04433 528 aa4.38□□□□□ -1.71
FOB1YDR110W SEN15Q04675 128 aa4.38□□□□□ -1.71
FOB1YDR110W KSH1Q8TGJ3 72 aa4.38□□□□□ -1.71
FOB1YDR110W HHF1P02309 103 aaKnown RBP4.38□□□□□ -1.71
FOB1YDR110W YLR156WP0CE96 114 aa4.38□□□□□ -1.71
FOB1YDR110W YLR159WP0CE97 114 aa4.38□□□□□ -1.71
FOB1YDR110W YLR161WP0CE98 114 aa4.38□□□□□ -1.71
FOB1YDR110W TMA19P35691 167 aaKnown RBP4.38□□□□□ -1.71
FOB1YDR110W SCW4P53334 386 aaKnown RBP4.38□□□□□ -1.71
FOB1YDR110W UPS3Q04006 179 aa4.38□□□□□ -1.71
FOB1YDR110W FEX1Q08913 375 aa4.38□□□□□ -1.71
FOB1YDR110W NAG1Q8TGN9 163 aa4.38□□□□□ -1.71
FOB1YDR110W YGL262WP53054 175 aa4.37□□□□□ -1.71
FOB1YDR110W FEX2Q08991 375 aa4.37□□□□□ -1.71
FOB1YDR110W YOR020W-AQ3E824 90 aa4.37□□□□□ -1.71
FOB1YDR110W UBR1P19812 1950 aa4.36□□□□□ -1.71
FOB1YDR110W YEL028WP39989 153 aa4.36□□□□□ -1.71
FOB1YDR110W YER135CP40082 130 aa4.36□□□□□ -1.71
FOB1YDR110W DAN1P47178 298 aa4.36□□□□□ -1.71
FOB1YDR110W YDR102CQ03864 110 aa4.36□□□□□ -1.71
FOB1YDR110W GAL83Q04739 417 aa4.36□□□□□ -1.71
FOB1YDR110W PIN3Q06449 215 aa4.36□□□□□ -1.71
FOB1YDR110W YBR298C-AQ8TGK4 73 aa4.36□□□□□ -1.71
FOB1YDR110W VPS13Q07878 3144 aa4.36□□□□□ -1.71
FOB1YDR110W RAD6P06104 172 aa4.35□□□□□ -1.71
FOB1YDR110W LSM2P38203 95 aaKnown RBP4.35□□□□□ -1.71
FOB1YDR110W YAL064WP39711 94 aa4.35□□□□□ -1.71
FOB1YDR110W YMR090WQ04304 227 aaKnown RBP4.35□□□□□ -1.71
FOB1YDR110W YLR281CQ05863 155 aa4.35□□□□□ -1.71
FOB1YDR110W YCR099CP25657 155 aa4.35□□□□□ -1.71
FOB1YDR110W YJR085CP47131 105 aaKnown RBP4.35□□□□□ -1.71
FOB1YDR110W RSM10Q03201 203 aa4.35□□□□□ -1.71
FOB1YDR110W YPL264CQ08980 353 aa4.35□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 25.3 ms