RNA–Protein interactions for RNA: YDR108W

TRS85, Transcript of Component of transport protein particle (TRAPP) complex III, yeastyeast

Gene TRS85, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS85YDR108W SPG3Q04398 127 aaPredicted RBP3.55□□□□□ -1.84
TRS85YDR108W UPS1Q05776 175 aa3.55□□□□□ -1.84
TRS85YDR108W GRX8Q05926 109 aa3.55□□□□□ -1.84
TRS85YDR108W FIT3Q08907 204 aa3.55□□□□□ -1.84
TRS85YDR108W YOR029WQ12243 111 aa3.55□□□□□ -1.84
TRS85YDR108W YKL183C-AQ3E765 70 aa3.55□□□□□ -1.84
TRS85YDR108W YLR149CQ99296 730 aa3.55□□□□□ -1.84
TRS85YDR108W SOD1P00445 154 aaKnown RBP3.55□□□□□ -1.84
TRS85YDR108W ERV1P27882 189 aa3.55□□□□□ -1.84
TRS85YDR108W IML3P38265 245 aa3.55□□□□□ -1.84
TRS85YDR108W YFR020WP43600 232 aa3.55□□□□□ -1.84
TRS85YDR108W YGL118CP53132 145 aa3.55□□□□□ -1.84
TRS85YDR108W YKL023C-AQ2V2P3 75 aa3.55□□□□□ -1.84
TRS85YDR108W YBR126W-AQ8TGU7 68 aa3.55□□□□□ -1.84
TRS85YDR108W YDR157WA0A023PZE8 133 aa3.54□□□□□ -1.84
TRS85YDR108W CPR2P23285 205 aa3.54□□□□□ -1.84
TRS85YDR108W YNL195CP40168 261 aa3.54□□□□□ -1.84
TRS85YDR108W GPI2P46961 280 aa3.54□□□□□ -1.84
TRS85YDR108W GEP7P53171 287 aa3.54□□□□□ -1.84
TRS85YDR108W CAX4P53223 239 aa3.54□□□□□ -1.84
TRS85YDR108W CSL4P53859 292 aaPredicted RBP3.54□□□□□ -1.84
TRS85YDR108W HPA2Q06592 156 aa3.54□□□□□ -1.84
TRS85YDR108W YLR042CQ07990 161 aa3.54□□□□□ -1.84
TRS85YDR108W RDL2Q08742 149 aaKnown RBP3.54□□□□□ -1.84
TRS85YDR108W SMT3Q12306 101 aaKnown RBP3.54□□□□□ -1.84
TRS85YDR108W YAL063C-AQ3E791 96 aa3.54□□□□□ -1.84
TRS85YDR108W MSB2P32334 1306 aa3.54□□□□□ -1.84
TRS85YDR108W FUB1P25659 250 aa3.53□□□□□ -1.84
TRS85YDR108W MID2P36027 376 aa3.53□□□□□ -1.84
TRS85YDR108W CUP9P41817 306 aa3.53□□□□□ -1.84
TRS85YDR108W LCB3P47013 409 aa3.53□□□□□ -1.84
TRS85YDR108W SWT21P53873 357 aaPredicted RBP3.53□□□□□ -1.84
TRS85YDR108W YNL143CP53908 130 aa3.53□□□□□ -1.84
TRS85YDR108W YDR119W-AQ2V2P9 66 aa3.53□□□□□ -1.84
TRS85YDR108W KTI11Q3E840 82 aa3.53□□□□□ -1.84
TRS85YDR108W RPS22AP0C0W1 130 aaKnown RBP3.53□□□□□ -1.84
TRS85YDR108W CSE2P33308 149 aa3.53□□□□□ -1.84
TRS85YDR108W CCS1P40202 249 aaKnown RBP3.53□□□□□ -1.84
TRS85YDR108W TDA4P47153 279 aa3.53□□□□□ -1.84
TRS85YDR108W POP3P53833 195 aaPredicted RBP3.53□□□□□ -1.84
TRS85YDR108W YPL039WQ03080 316 aa3.53□□□□□ -1.84
TRS85YDR108W PIR3Q03180 325 aa3.53□□□□□ -1.84
TRS85YDR108W GEP3Q08622 556 aa3.53□□□□□ -1.84
TRS85YDR108W FCY1Q12178 158 aa3.53□□□□□ -1.84
TRS85YDR108W YPR011CQ12251 326 aa3.53□□□□□ -1.84
TRS85YDR108W YFL041W-AQ3E817 63 aa3.53□□□□□ -1.84
TRS85YDR108W YLL053CP0CD98 152 aa3.52□□□□□ -1.85
TRS85YDR108W YSR3P23501 404 aa3.52□□□□□ -1.85
TRS85YDR108W RPA12P32529 125 aaKnown RBP3.52□□□□□ -1.85
TRS85YDR108W YBL059WP34224 193 aa3.52□□□□□ -1.85
TRS85YDR108W YPT10P38146 199 aa3.52□□□□□ -1.85
TRS85YDR108W YEL073CP39974 107 aa3.52□□□□□ -1.85
TRS85YDR108W YNL200CP40165 246 aaKnown RBP3.52□□□□□ -1.85
TRS85YDR108W MRPL49P40858 161 aaPredicted RBP3.52□□□□□ -1.85
TRS85YDR108W CRH1P53301 507 aa3.52□□□□□ -1.85
TRS85YDR108W AYT1Q12226 474 aa3.52□□□□□ -1.85
TRS85YDR108W YBR182C-AQ8TGU6 64 aa3.52□□□□□ -1.85
TRS85YDR108W RPL11AP0C0W9 174 aaKnown RBP3.51□□□□□ -1.85
TRS85YDR108W YMR31P19955 123 aa3.51□□□□□ -1.85
TRS85YDR108W PRS4P38063 326 aaPredicted RBP3.51□□□□□ -1.85
TRS85YDR108W IST3P40565 148 aaPredicted RBP3.51□□□□□ -1.85
TRS85YDR108W MSO1P53604 210 aaKnown RBP3.51□□□□□ -1.85
TRS85YDR108W YMR103CQ04436 120 aa3.51□□□□□ -1.85
TRS85YDR108W HNT3Q08702 217 aa3.51□□□□□ -1.85
TRS85YDR108W COX17Q12287 69 aa3.51□□□□□ -1.85
TRS85YDR108W YDL180WQ12301 547 aa3.51□□□□□ -1.85
TRS85YDR108W RPL11BQ3E757 174 aaPredicted RBP3.51□□□□□ -1.85
TRS85YDR108W DFG10P40526 253 aa3.51□□□□□ -1.85
TRS85YDR108W BUD8P41698 603 aa3.51□□□□□ -1.85
TRS85YDR108W TPC1P53257 314 aa3.51□□□□□ -1.85
TRS85YDR108W YNR071CP53757 342 aa3.51□□□□□ -1.85
TRS85YDR108W DAD1Q12248 94 aa3.51□□□□□ -1.85
TRS85YDR108W MST28P39552 234 aa3.5□□□□□ -1.85
TRS85YDR108W BRP1P53194 125 aa3.5□□□□□ -1.85
TRS85YDR108W COF1Q03048 143 aaKnown RBP3.5□□□□□ -1.85
TRS85YDR108W MIX17Q03667 156 aa3.5□□□□□ -1.85
TRS85YDR108W YLR302CO13544 120 aa3.5□□□□□ -1.85
TRS85YDR108W QCR9P22289 66 aa3.5□□□□□ -1.85
TRS85YDR108W YKR041WP36134 250 aa3.5□□□□□ -1.85
TRS85YDR108W YIL163CP40448 117 aa3.5□□□□□ -1.85
TRS85YDR108W YIR016WP40572 265 aa3.5□□□□□ -1.85
TRS85YDR108W BRR6P53062 197 aa3.5□□□□□ -1.85
TRS85YDR108W CPD1P53314 239 aa3.5□□□□□ -1.85
TRS85YDR108W GPI19Q04082 140 aa3.5□□□□□ -1.85
TRS85YDR108W RAF1Q06891 181 aa3.5□□□□□ -1.85
TRS85YDR108W MPD1Q12404 318 aaKnown RBP3.5□□□□□ -1.85
TRS85YDR108W RPS16AP0CX51 143 aaKnown RBP3.49□□□□□ -1.85
TRS85YDR108W RPS16BP0CX52 143 aaKnown RBP3.49□□□□□ -1.85
TRS85YDR108W ECM15P35195 104 aa3.49□□□□□ -1.85
TRS85YDR108W YER181CP40097 107 aa3.49□□□□□ -1.85
TRS85YDR108W CDC1P40986 491 aa3.49□□□□□ -1.85
TRS85YDR108W DSK2P48510 373 aa3.49□□□□□ -1.85
TRS85YDR108W GLO1P50107 326 aa3.49□□□□□ -1.85
TRS85YDR108W YIL014C-AQ02598 104 aa3.49□□□□□ -1.85
TRS85YDR108W YDR042CQ03205 200 aa3.49□□□□□ -1.85
TRS85YDR108W YOR292CQ08743 309 aa3.49□□□□□ -1.85
TRS85YDR108W YOR097CQ12274 175 aaPredicted RBP3.49□□□□□ -1.85
TRS85YDR108W YLR412C-AQ3E742 68 aa3.49□□□□□ -1.85
TRS85YDR108W YCL021W-AQ96VH3 125 aa3.49□□□□□ -1.85
TRS85YDR108W MDM10P18409 493 aa3.48□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 56.3 ms