RNA–Protein interactions for RNA: YDL212W

SHR3, Transcript of Endoplasmic reticulum packaging chaperone, yeastyeast

Gene SHR3, Length 633 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR3YDL212W RRT7Q07829 113 aa1.42□□□□□ -2.18
SHR3YDL212W FMP49A0A023PZB3 126 aa1.41□□□□□ -2.18
SHR3YDL212W AHT1P29589 182 aa1.41□□□□□ -2.18
SHR3YDL212W VMA7P39111 118 aa1.41□□□□□ -2.18
SHR3YDL212W YNR064CP53750 290 aa1.41□□□□□ -2.18
SHR3YDL212W YNL019CP53975 284 aa1.41□□□□□ -2.18
SHR3YDL212W UPS3Q04006 179 aa1.41□□□□□ -2.18
SHR3YDL212W UIP4Q08926 304 aa1.41□□□□□ -2.18
SHR3YDL212W YOR015WQ12169 119 aa1.41□□□□□ -2.18
SHR3YDL212W YIR021W-AQ3E739 70 aa1.41□□□□□ -2.18
SHR3YDL212W RPS1BP23248 255 aaKnown RBP1.4□□□□□ -2.19
SHR3YDL212W MRS4P23500 304 aa1.4□□□□□ -2.19
SHR3YDL212W YRA2P36036 203 aaKnown RBP RIP-Chip data1.4□□□□□ -2.19not detected
SHR3YDL212W MPM1P40364 252 aa1.4□□□□□ -2.19
SHR3YDL212W NSE4P43124 402 aa1.4□□□□□ -2.19
SHR3YDL212W SFT1P43682 97 aa1.4□□□□□ -2.19
SHR3YDL212W EMC4P53073 190 aa1.4□□□□□ -2.19
SHR3YDL212W GEP7P53171 287 aa1.4□□□□□ -2.19
SHR3YDL212W UPS1Q05776 175 aa1.4□□□□□ -2.19
SHR3YDL212W COA3Q3E7B2 85 aa1.4□□□□□ -2.19
SHR3YDL212W YOR381W-AQ3E804 55 aa1.4□□□□□ -2.19
SHR3YDL212W DUR1,2P32528 1835 aaKnown RBP1.4□□□□□ -2.19
SHR3YDL212W SPA2P23201 1466 aaKnown RBP1.39□□□□□ -2.19
SHR3YDL212W DDR48P18899 430 aaKnown RBP1.39□□□□□ -2.19
SHR3YDL212W MRP49P32388 137 aa1.39□□□□□ -2.19
SHR3YDL212W YKR070WP36151 352 aaKnown RBP1.39□□□□□ -2.19
SHR3YDL212W TRS20P38334 175 aa1.39□□□□□ -2.19
SHR3YDL212W YPT31P38555 223 aaKnown RBP1.39□□□□□ -2.19
SHR3YDL212W YGR017WP53210 297 aa1.39□□□□□ -2.19
SHR3YDL212W ARL3Q02804 198 aa1.39□□□□□ -2.19
SHR3YDL212W DML1Q03652 475 aa1.39□□□□□ -2.19
SHR3YDL212W YPR114WQ06107 315 aa1.39□□□□□ -2.19
SHR3YDL212W ATG10Q07879 167 aa1.39□□□□□ -2.19
SHR3YDL212W ATG41Q12048 136 aa1.39□□□□□ -2.19
SHR3YDL212W STF2P16965 84 aa1.38□□□□□ -2.19
SHR3YDL212W UGX2P32772 223 aa1.38□□□□□ -2.19
SHR3YDL212W HPM1P40481 377 aa1.38□□□□□ -2.19
SHR3YDL212W MOB1P40484 314 aa1.38□□□□□ -2.19
SHR3YDL212W PAC10P48363 199 aa1.38□□□□□ -2.19
SHR3YDL212W SPG1P50088 95 aa1.38□□□□□ -2.19
SHR3YDL212W AIM11P87275 137 aa1.38□□□□□ -2.19
SHR3YDL212W APS2Q00381 147 aa1.38□□□□□ -2.19
SHR3YDL212W YHP1Q04116 353 aa1.38□□□□□ -2.19
SHR3YDL212W YLR422WQ06409 1932 aa1.37□□□□□ -2.19
SHR3YDL212W YOR304C-AO14468 76 aa1.37□□□□□ -2.19
SHR3YDL212W KIN28P06242 306 aa1.37□□□□□ -2.19
SHR3YDL212W HYM1P32464 399 aa1.37□□□□□ -2.19
SHR3YDL212W RPL14AP36105 138 aaKnown RBP1.37□□□□□ -2.19
SHR3YDL212W RPL14BP38754 138 aaKnown RBP1.37□□□□□ -2.19
SHR3YDL212W YML079WQ03629 201 aa1.37□□□□□ -2.19
SHR3YDL212W AIM36Q03798 255 aa1.37□□□□□ -2.19
SHR3YDL212W YLR118CQ12354 227 aa1.37□□□□□ -2.19
SHR3YDL212W YLR099W-AQ3E798 87 aa1.37□□□□□ -2.19
SHR3YDL212W ACC1Q00955 2233 aaKnown RBP1.37□□□□□ -2.19
SHR3YDL212W ADE6P38972 1358 aaKnown RBP1.36□□□□□ -2.19
SHR3YDL212W SPS2P08459 502 aa1.36□□□□□ -2.19
SHR3YDL212W YBL010CP32788 280 aa1.36□□□□□ -2.19
SHR3YDL212W SFT2P38166 215 aa1.36□□□□□ -2.19
SHR3YDL212W GAT4P40569 121 aa1.36□□□□□ -2.19
SHR3YDL212W PHS1P40857 217 aa1.36□□□□□ -2.19
SHR3YDL212W ATP19P81451 68 aa1.36□□□□□ -2.19
SHR3YDL212W ELC1Q03071 99 aa1.36□□□□□ -2.19
SHR3YDL212W TVP18Q04767 167 aa1.36□□□□□ -2.19
SHR3YDL212W ELP6Q04868 273 aa1.36□□□□□ -2.19
SHR3YDL212W YDL241WQ07738 123 aa1.36□□□□□ -2.19
SHR3YDL212W YDL157CQ12082 118 aa1.36□□□□□ -2.19
SHR3YDL212W SCS22Q6Q595 175 aa1.36□□□□□ -2.19
SHR3YDL212W TAR1Q8TGM6 124 aa1.36□□□□□ -2.19
SHR3YDL212W YCR050CP25630 102 aa1.35□□□□□ -2.19
SHR3YDL212W GSP1P32835 219 aaKnown RBP1.35□□□□□ -2.19
SHR3YDL212W YER137CP40083 148 aaKnown RBP1.35□□□□□ -2.19
SHR3YDL212W CCS1P40202 249 aaKnown RBP1.35□□□□□ -2.19
SHR3YDL212W YGR269WP40326 108 aa1.35□□□□□ -2.19
SHR3YDL212W LSM8P47093 109 aaKnown RBP1.35□□□□□ -2.19
SHR3YDL212W MET31Q03081 177 aa1.35□□□□□ -2.19
SHR3YDL212W TMA23Q03525 211 aa1.35□□□□□ -2.19
SHR3YDL212W DDP1Q99321 188 aaKnown RBP1.35□□□□□ -2.19
SHR3YDL212W UBR1P19812 1950 aa1.35□□□□□ -2.19
SHR3YDL212W MDS3P53094 1487 aa1.35□□□□□ -2.19
SHR3YDL212W YGL041W-AP0C5N3 154 aa1.34□□□□□ -2.19
SHR3YDL212W INO4P13902 151 aa1.34□□□□□ -2.19
SHR3YDL212W MAK31P23059 88 aa1.34□□□□□ -2.19
SHR3YDL212W ETR1P38071 380 aa1.34□□□□□ -2.19
SHR3YDL212W DIE2P50076 525 aa1.34□□□□□ -2.19
SHR3YDL212W KEI1Q06346 221 aa1.34□□□□□ -2.19
SHR3YDL212W IRC19Q07843 230 aa1.34□□□□□ -2.19
SHR3YDL212W LDB18Q07887 179 aa1.34□□□□□ -2.19
SHR3YDL212W YOR385WQ08909 290 aa1.34□□□□□ -2.19
SHR3YDL212W HUT1Q12520 339 aa1.34□□□□□ -2.19
SHR3YDL212W KTI11Q3E840 82 aa1.34□□□□□ -2.19
SHR3YDL212W HSL1P34244 1518 aa1.34□□□□□ -2.2
SHR3YDL212W MPC1P53157 130 aaKnown RBP1.33□□□□□ -2.2
SHR3YDL212W RUB1Q03919 77 aa1.33□□□□□ -2.2
SHR3YDL212W SOM1Q05676 74 aa1.33□□□□□ -2.2
SHR3YDL212W NMA1Q06178 401 aaKnown RBP1.33□□□□□ -2.2
SHR3YDL212W RAF1Q06891 181 aa1.33□□□□□ -2.2
SHR3YDL212W YMR030W-AQ3E760 96 aa1.33□□□□□ -2.2
SHR3YDL212W SNT2P53127 1403 aa1.32□□□□□ -2.2
SHR3YDL212W RPS25BP0C0T4 108 aaKnown RBP1.32□□□□□ -2.2
SHR3YDL212W NMT1P14743 455 aa1.32□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 190.7 ms