RNA–Protein interactions for RNA: YDL116W

NUP84, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP84, Length 2,181 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP84YDL116W HTB1P02293 131 aaKnown RBP5.78□□□□□ -1.48
NUP84YDL116W HTB2P02294 131 aa5.78□□□□□ -1.48
NUP84YDL116W ERG8P24521 451 aa5.78□□□□□ -1.48
NUP84YDL116W SRP21P32342 167 aa5.78□□□□□ -1.48
NUP84YDL116W QRI5P32344 111 aa5.78□□□□□ -1.48
NUP84YDL116W RPF1P38805 295 aaKnown RBP5.78□□□□□ -1.48
NUP84YDL116W YHR138CP38841 114 aaPredicted RBP5.78□□□□□ -1.48
NUP84YDL116W EGT2P42835 1041 aa5.78□□□□□ -1.48
NUP84YDL116W RDL1Q12305 139 aaKnown RBP5.78□□□□□ -1.48
NUP84YDL116W FMP27Q06179 2628 aa5.77□□□□□ -1.49
NUP84YDL116W SFT2P38166 215 aa5.77□□□□□ -1.49
NUP84YDL116W YMR141CP40211 102 aa5.77□□□□□ -1.49
NUP84YDL116W CYB5P40312 120 aa5.77□□□□□ -1.49
NUP84YDL116W YGL230CP53074 147 aa5.77□□□□□ -1.49
NUP84YDL116W YGR017WP53210 297 aa5.77□□□□□ -1.49
NUP84YDL116W NRM1P53718 249 aa5.77□□□□□ -1.49
NUP84YDL116W TVP18Q04767 167 aa5.77□□□□□ -1.49
NUP84YDL116W PAU23Q07987 124 aa5.77□□□□□ -1.49
NUP84YDL116W HRD1Q08109 551 aa5.77□□□□□ -1.49
NUP84YDL116W UTP23Q12339 254 aaKnown RBP5.77□□□□□ -1.49
NUP84YDL116W PAU17Q12370 124 aa5.77□□□□□ -1.49
NUP84YDL116W Q0144Q9ZZW2 109 aa5.77□□□□□ -1.49
NUP84YDL116W HFA1P32874 2273 aa5.77□□□□□ -1.49
NUP84YDL116W RPL39P04650 51 aa5.77□□□□□ -1.49
NUP84YDL116W CDC43P18898 376 aa5.77□□□□□ -1.49
NUP84YDL116W UBC13P52490 153 aa5.77□□□□□ -1.49
NUP84YDL116W UPS1Q05776 175 aa5.77□□□□□ -1.49
NUP84YDL116W FSF1Q12029 327 aaKnown RBP5.77□□□□□ -1.49
NUP84YDL116W YPR170W-BP0C5R9 85 aa5.76□□□□□ -1.49
NUP84YDL116W PRE1P22141 198 aaKnown RBP5.76□□□□□ -1.49
NUP84YDL116W RRS1Q08746 203 aaKnown RBP5.76□□□□□ -1.49
NUP84YDL116W FOL3Q12676 427 aaPredicted RBP5.76□□□□□ -1.49
NUP84YDL116W PIS1P06197 220 aaKnown RBP5.76□□□□□ -1.49
NUP84YDL116W PRM5P40476 318 aa5.76□□□□□ -1.49
NUP84YDL116W CRZ1P53968 678 aa5.76□□□□□ -1.49
NUP84YDL116W FIT2Q08906 153 aa5.76□□□□□ -1.49
NUP84YDL116W SEC72P39742 193 aaKnown RBP5.75□□□□□ -1.49
NUP84YDL116W PIR5P46999 287 aa5.75□□□□□ -1.49
NUP84YDL116W GLO1P50107 326 aa5.75□□□□□ -1.49
NUP84YDL116W COX18P53239 316 aa5.75□□□□□ -1.49
NUP84YDL116W POP3P53833 195 aaPredicted RBP5.75□□□□□ -1.49
NUP84YDL116W PRP11Q07350 266 aaPredicted RBP5.75□□□□□ -1.49
NUP84YDL116W IRC25Q07951 179 aa5.75□□□□□ -1.49
NUP84YDL116W YPL162CQ12042 273 aa5.75□□□□□ -1.49
NUP84YDL116W RPL7AP05737 244 aaKnown RBP5.74□□□□□ -1.49
NUP84YDL116W YFR045WP43617 309 aa5.74□□□□□ -1.49
NUP84YDL116W RPL15BP54780 204 aaPredicted RBP5.74□□□□□ -1.49
NUP84YDL116W YDR209CQ03480 137 aa5.74□□□□□ -1.49
NUP84YDL116W RPL7BQ12213 244 aaKnown RBP5.74□□□□□ -1.49
NUP84YDL116W YER190C-BP0CX94 160 aa5.74□□□□□ -1.49
NUP84YDL116W YEL077W-AP0CX95 160 aa5.74□□□□□ -1.49
NUP84YDL116W YGR296C-BP0CX96 160 aa5.74□□□□□ -1.49
NUP84YDL116W YPL283W-BP0CX97 160 aa5.74□□□□□ -1.49
NUP84YDL116W YPR204C-AP0CX98 160 aa5.74□□□□□ -1.49
NUP84YDL116W FYV4P38783 130 aaPredicted RBP5.74□□□□□ -1.49
NUP84YDL116W EOS1P53938 366 aa5.74□□□□□ -1.49
NUP84YDL116W YDR391CQ04170 232 aa5.74□□□□□ -1.49
NUP84YDL116W YGL258W-AQ3E740 77 aa5.74□□□□□ -1.49
NUP84YDL116W RPS22BQ3E7Y3 130 aaKnown RBP5.74□□□□□ -1.49
NUP84YDL116W MRS1P07266 363 aa5.73□□□□□ -1.49
NUP84YDL116W RPL35AP0CX84 120 aaKnown RBP5.73□□□□□ -1.49
NUP84YDL116W RPL35BP0CX85 120 aaKnown RBP5.73□□□□□ -1.49
NUP84YDL116W MTR2P34232 184 aaKnown RBP5.73□□□□□ -1.49
NUP84YDL116W SNU13P39990 126 aaKnown RBP5.73□□□□□ -1.49
NUP84YDL116W TIM18Q08749 192 aa5.73□□□□□ -1.49
NUP84YDL116W HSP12P22943 109 aaKnown RBP5.73□□□□□ -1.49
NUP84YDL116W YKL102CP34249 101 aa5.73□□□□□ -1.49
NUP84YDL116W SOR1P35497 357 aaKnown RBP5.73□□□□□ -1.49
NUP84YDL116W CTR2P38865 189 aa5.73□□□□□ -1.49
NUP84YDL116W PET8P38921 284 aa5.73□□□□□ -1.49
NUP84YDL116W YNL198CP40166 100 aa5.73□□□□□ -1.49
NUP84YDL116W BRP1P53194 125 aa5.73□□□□□ -1.49
NUP84YDL116W DPP1Q05521 289 aa5.73□□□□□ -1.49
NUP84YDL116W SOR2Q07786 357 aa5.73□□□□□ -1.49
NUP84YDL116W VPS63O13549 108 aa5.72□□□□□ -1.49
NUP84YDL116W MBF1O14467 151 aaKnown RBP5.72□□□□□ -1.49
NUP84YDL116W DDI2P0CH63 225 aa5.72□□□□□ -1.49
NUP84YDL116W DDI3P0CH64 225 aa5.72□□□□□ -1.49
NUP84YDL116W TOM40P23644 387 aaKnown RBP5.72□□□□□ -1.49
NUP84YDL116W YKR070WP36151 352 aaKnown RBP5.72□□□□□ -1.49
NUP84YDL116W AIM29P36154 155 aa5.72□□□□□ -1.49
NUP84YDL116W DOG2P38773 246 aa5.72□□□□□ -1.49
NUP84YDL116W YHR173CP38864 112 aa5.72□□□□□ -1.49
NUP84YDL116W LST8P41318 303 aa5.72□□□□□ -1.49
NUP84YDL116W IRC23Q08416 157 aa5.72□□□□□ -1.49
NUP84YDL116W DFM1Q12743 341 aaKnown RBP5.72□□□□□ -1.49
NUP84YDL116W SIP18P50263 79 aa5.72□□□□□ -1.49
NUP84YDL116W YPS3Q12303 508 aa5.72□□□□□ -1.49
NUP84YDL116W MRPL31P14063 131 aaPredicted RBP5.71□□□□□ -1.5
NUP84YDL116W YCR022CP25620 114 aa5.71□□□□□ -1.5
NUP84YDL116W PMU1P36069 295 aa5.71□□□□□ -1.5
NUP84YDL116W MRPL39P36533 70 aa5.71□□□□□ -1.5
NUP84YDL116W LIP2Q06005 328 aa5.71□□□□□ -1.5
NUP84YDL116W ATG39Q06159 398 aa5.71□□□□□ -1.5
NUP84YDL116W YPR117WQ06116 2489 aa5.71□□□□□ -1.5
NUP84YDL116W YPT1P01123 206 aaKnown RBP5.7□□□□□ -1.5
NUP84YDL116W YMR31P19955 123 aa5.7□□□□□ -1.5
NUP84YDL116W GRH1Q04410 372 aaKnown RBP5.7□□□□□ -1.5
NUP84YDL116W CNL1Q06333 122 aa5.7□□□□□ -1.5
NUP84YDL116W ICS2P38284 255 aa5.7□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 36.4 ms