RNA–Protein interactions for RNA: YDL022W

GPD1, Transcript of NAD-dependent glycerol-3-phosphate dehydrogenase, yeast

Gene GPD1, Length 1,176 nt, Biotype protein coding, Subcellular localisation Cell cortex, Endoplasmic reticulum, Peroxisome .

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RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GPD1	YDL022W	SHH3	Q04487	196 aa		5.01	□□□□□ -1.61
GPD1	YDL022W	VAM10	Q08474	114 aa		5.01	□□□□□ -1.61
GPD1	YDL022W	SNU23	Q12368	194 aa	Predicted RBP	5.01	□□□□□ -1.61
GPD1	YDL022W	TMA17	Q12513	150 aa		5.01	□□□□□ -1.61
GPD1	YDL022W	VMA9	Q3E7B6	73 aa		5.01	□□□□□ -1.61
GPD1	YDL022W	YMR316C-A	I2HB70	103 aa		5	□□□□□ -1.61
GPD1	YDL022W	RPL2A	P0CX45	254 aa	Known RBP	5	□□□□□ -1.61
GPD1	YDL022W	RPL2B	P0CX46	254 aa	Known RBP	5	□□□□□ -1.61
GPD1	YDL022W	YCR025C	P25352	136 aa		5	□□□□□ -1.61
GPD1	YDL022W	PEX7	P39108	375 aa		5	□□□□□ -1.61
GPD1	YDL022W	YGL117W	P53133	265 aa		5	□□□□□ -1.61
GPD1	YDL022W	YGR026W	P53217	278 aa		5	□□□□□ -1.61
GPD1	YDL022W	HHO1	P53551	258 aa		5	□□□□□ -1.61
GPD1	YDL022W	PRM7	Q12459	698 aa		5	□□□□□ -1.61
GPD1	YDL022W	YPR145C-A	Q2V2P0	78 aa		5	□□□□□ -1.61
GPD1	YDL022W	Q0142	Q9ZZW4	58 aa		5	□□□□□ -1.61
GPD1	YDL022W	RPS11A	P0CX47	156 aa	Known RBP	4.99	□□□□□ -1.61
GPD1	YDL022W	RPS11B	P0CX48	156 aa	Known RBP	4.99	□□□□□ -1.61
GPD1	YDL022W	TIR2	P33890	251 aa		4.99	□□□□□ -1.61
GPD1	YDL022W	PTC7	P38797	343 aa		4.99	□□□□□ -1.61
GPD1	YDL022W	YIL077C	P40508	320 aa		4.99	□□□□□ -1.61
GPD1	YDL022W	ATG27	P46989	271 aa		4.99	□□□□□ -1.61
GPD1	YDL022W	LCB3	P47013	409 aa		4.99	□□□□□ -1.61
GPD1	YDL022W	SRB7	P47822	140 aa		4.99	□□□□□ -1.61
GPD1	YDL022W	FMP41	P53889	259 aa	Known RBP	4.99	□□□□□ -1.61
GPD1	YDL022W	SGF11	Q03067	99 aa		4.99	□□□□□ -1.61
GPD1	YDL022W	YOL160W	Q08321	113 aa		4.99	□□□□□ -1.61
GPD1	YDL022W	CCW12	Q12127	133 aa		4.99	□□□□□ -1.61
GPD1	YDL022W	YER135C	P40082	130 aa		4.98	□□□□□ -1.61
GPD1	YDL022W	EMC5	P40540	141 aa		4.98	□□□□□ -1.61
GPD1	YDL022W	HAL1	Q01766	294 aa		4.98	□□□□□ -1.61
GPD1	YDL022W	SNO1	Q03144	224 aa		4.98	□□□□□ -1.61
GPD1	YDL022W	ARR3	Q06598	404 aa		4.98	□□□□□ -1.61
GPD1	YDL022W	MSK1	P32048	576 aa		4.97	□□□□□ -1.61
GPD1	YDL022W	AFR1	P33304	620 aa		4.97	□□□□□ -1.61
GPD1	YDL022W	YBL059W	P34224	193 aa		4.97	□□□□□ -1.61
GPD1	YDL022W	MIG3	P39943	394 aa		4.97	□□□□□ -1.61
GPD1	YDL022W	YJR096W	P47137	282 aa		4.97	□□□□□ -1.61
GPD1	YDL022W	RIB4	P50861	169 aa	Predicted RBP	4.97	□□□□□ -1.61
GPD1	YDL022W	YNR066C	P53752	436 aa		4.97	□□□□□ -1.61
GPD1	YDL022W	MRX11	Q03079	207 aa		4.97	□□□□□ -1.61
GPD1	YDL022W	FCF2	Q12035	217 aa	Predicted RBP	4.97	□□□□□ -1.61
GPD1	YDL022W	UBI4	P0CG63	381 aa	Known RBP	4.96	□□□□□ -1.62
GPD1	YDL022W	MRPL20	P22354	195 aa	Predicted RBP	4.96	□□□□□ -1.62
GPD1	YDL022W	HSP12	P22943	109 aa	Known RBP	4.96	□□□□□ -1.62
GPD1	YDL022W	LSM2	P38203	95 aa	Known RBP	4.96	□□□□□ -1.62
GPD1	YDL022W	DER1	P38307	211 aa		4.96	□□□□□ -1.62
GPD1	YDL022W	PGD1	P40356	397 aa		4.96	□□□□□ -1.62
GPD1	YDL022W	NSE4	P43124	402 aa		4.96	□□□□□ -1.62
GPD1	YDL022W	ATC1	Q04005	294 aa		4.96	□□□□□ -1.62
GPD1	YDL022W	YDL242W	Q07746	117 aa		4.96	□□□□□ -1.62
GPD1	YDL022W	SDO1	Q07953	250 aa	Known RBP	4.96	□□□□□ -1.62
GPD1	YDL022W	ATX2	Q12067	313 aa		4.96	□□□□□ -1.62
GPD1	YDL022W	YBR126W-A	Q8TGU7	68 aa		4.96	□□□□□ -1.62
GPD1	YDL022W	YBR292C	P38357	123 aa		4.95	□□□□□ -1.62
GPD1	YDL022W	PRE5	P40302	234 aa	Known RBP	4.95	□□□□□ -1.62
GPD1	YDL022W	POG1	P40473	351 aa		4.95	□□□□□ -1.62
GPD1	YDL022W	GTT1	P40582	234 aa		4.95	□□□□□ -1.62
GPD1	YDL022W	YCL001W-A	P87012	153 aa		4.95	□□□□□ -1.62
GPD1	YDL022W	CTR3	Q06686	241 aa		4.95	□□□□□ -1.62
GPD1	YDL022W	ERV2	Q12284	196 aa		4.95	□□□□□ -1.62
GPD1	YDL022W	YCR075W-A	Q3E830	75 aa		4.95	□□□□□ -1.62
GPD1	YDL022W	AHT1	P29589	182 aa		4.94	□□□□□ -1.62
GPD1	YDL022W	YHR022C	P38763	256 aa		4.94	□□□□□ -1.62
GPD1	YDL022W	MBB1	P39534	108 aa		4.94	□□□□□ -1.62
GPD1	YDL022W	YGR025W	P53216	100 aa		4.94	□□□□□ -1.62
GPD1	YDL022W	MRPS17	Q03246	237 aa	Predicted RBP	4.94	□□□□□ -1.62
GPD1	YDL022W	ZEO1	Q08245	113 aa		4.94	□□□□□ -1.62
GPD1	YDL022W	LSO2	Q3E772	92 aa	Known RBP	4.94	□□□□□ -1.62
GPD1	YDL022W	MRS1	P07266	363 aa		4.93	□□□□□ -1.62
GPD1	YDL022W	RPB3	P16370	318 aa	Known RBP	4.93	□□□□□ -1.62
GPD1	YDL022W	ATG8	P38182	117 aa	RIP-Chip data	4.93	□□□□□ -1.62	not detected
GPD1	YDL022W	MOG1	P47123	218 aa		4.93	□□□□□ -1.62
GPD1	YDL022W	YMR007W	Q03675	126 aa		4.93	□□□□□ -1.62
GPD1	YDL022W	AVO2	Q04749	426 aa		4.93	□□□□□ -1.62
GPD1	YDL022W	CPT1	P17898	393 aa		4.92	□□□□□ -1.62
GPD1	YDL022W	VMA16	P23968	213 aa		4.92	□□□□□ -1.62
GPD1	YDL022W	CDC50	P25656	391 aa		4.92	□□□□□ -1.62
GPD1	YDL022W	SPC25	P40014	221 aa		4.92	□□□□□ -1.62
GPD1	YDL022W	VHS2	P40463	436 aa		4.92	□□□□□ -1.62
GPD1	YDL022W	RPR2	P40571	144 aa		4.92	□□□□□ -1.62
GPD1	YDL022W	ADD37	Q03233	198 aa		4.92	□□□□□ -1.62
GPD1	YDL022W	YMR253C	Q04835	414 aa		4.92	□□□□□ -1.62
GPD1	YDL022W	FIT2	Q08906	153 aa		4.92	□□□□□ -1.62
GPD1	YDL022W	SPO13	P23624	291 aa		4.91	□□□□□ -1.62
GPD1	YDL022W	SPI1	P40092	148 aa		4.91	□□□□□ -1.62
GPD1	YDL022W	VMA21	P41806	77 aa		4.91	□□□□□ -1.62
GPD1	YDL022W	DAN1	P47178	298 aa		4.91	□□□□□ -1.62
GPD1	YDL022W	CGR1	P53188	120 aa		4.91	□□□□□ -1.62
GPD1	YDL022W	COX19	Q3E731	98 aa		4.91	□□□□□ -1.62
GPD1	YDL022W	YCR001W	P25347	104 aa		4.9	□□□□□ -1.63
GPD1	YDL022W	NTF2	P33331	125 aa	Known RBP	4.9	□□□□□ -1.63
GPD1	YDL022W	SHG1	P38337	142 aa		4.9	□□□□□ -1.63
GPD1	YDL022W	YCH1	P42937	148 aa		4.9	□□□□□ -1.63
GPD1	YDL022W	SMD3	P43321	101 aa	Known RBP	4.9	□□□□□ -1.63
GPD1	YDL022W	TIM21	P53220	239 aa		4.9	□□□□□ -1.63
GPD1	YDL022W	TMA23	Q03525	211 aa		4.9	□□□□□ -1.63
GPD1	YDL022W	VAR1	P02381	398 aa		4.89	□□□□□ -1.63
GPD1	YDL022W	ADH3	P07246	375 aa	Known RBP	4.89	□□□□□ -1.63
GPD1	YDL022W	RPS2	P25443	254 aa	Known RBP	4.89	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 63.7 ms