RNA–Protein interactions for RNA: YDL017W

CDC7, Transcript of DDK (Dbf4-dependent kinase) catalytic subunit, yeast

Gene CDC7, Length 1,524 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC7	YDL017W	HST4	P53688	370 aa		5.72	□□□□□ -1.49
CDC7	YDL017W	ATP19	P81451	68 aa		5.72	□□□□□ -1.49
CDC7	YDL017W	SDH7	Q04401	133 aa		5.72	□□□□□ -1.49
CDC7	YDL017W	RXT3	Q07458	294 aa		5.72	□□□□□ -1.49
CDC7	YDL017W	FCY1	Q12178	158 aa		5.72	□□□□□ -1.49
CDC7	YDL017W	AYT1	Q12226	474 aa		5.72	□□□□□ -1.49
CDC7	YDL017W	YIR020C	P40575	100 aa		5.71	□□□□□ -1.5
CDC7	YDL017W	ERV14	P53173	138 aa		5.71	□□□□□ -1.5
CDC7	YDL017W	JID1	Q12350	301 aa		5.71	□□□□□ -1.5
CDC7	YDL017W	COA6	Q3E846	104 aa		5.71	□□□□□ -1.5
CDC7	YDL017W	YCL001W-B	Q96VH2	84 aa		5.71	□□□□□ -1.5
CDC7	YDL017W	MRS1	P07266	363 aa		5.7	□□□□□ -1.5
CDC7	YDL017W	HMRA1	P0CY11	126 aa		5.7	□□□□□ -1.5
CDC7	YDL017W	TIR1	P10863	254 aa		5.7	□□□□□ -1.5
CDC7	YDL017W	PAM17	P36147	197 aa		5.7	□□□□□ -1.5
CDC7	YDL017W	RRT1	P38192	103 aa		5.7	□□□□□ -1.5
CDC7	YDL017W	OST3	P48439	350 aa		5.7	□□□□□ -1.5
CDC7	YDL017W	TOM7	P53507	60 aa		5.7	□□□□□ -1.5
CDC7	YDL017W	TIM10	P87108	93 aa		5.7	□□□□□ -1.5
CDC7	YDL017W	YMR166C	Q03829	368 aa		5.7	□□□□□ -1.5
CDC7	YDL017W	YHR213W	P0CI67	198 aa		5.69	□□□□□ -1.5
CDC7	YDL017W	CUP2	P15315	225 aa		5.69	□□□□□ -1.5
CDC7	YDL017W	MIX23	P38162	196 aa		5.69	□□□□□ -1.5
CDC7	YDL017W	YHL044W	P38727	235 aa		5.69	□□□□□ -1.5
CDC7	YDL017W	HUA1	P40325	198 aa		5.69	□□□□□ -1.5
CDC7	YDL017W	YIL012W	P40551	113 aa		5.69	□□□□□ -1.5
CDC7	YDL017W	YNL092W	P53934	400 aa		5.69	□□□□□ -1.5
CDC7	YDL017W	TMA10	Q06177	86 aa		5.69	□□□□□ -1.5
CDC7	YDL017W	CSI2	Q08054	341 aa		5.69	□□□□□ -1.5
CDC7	YDL017W	ATX2	Q12067	313 aa		5.69	□□□□□ -1.5
CDC7	YDL017W	YIL134C-A	Q45U18	67 aa		5.69	□□□□□ -1.5
CDC7	YDL017W	DDI2	P0CH63	225 aa		5.69	□□□□□ -1.5
CDC7	YDL017W	DDI3	P0CH64	225 aa		5.69	□□□□□ -1.5
CDC7	YDL017W	RPB11	P38902	120 aa		5.69	□□□□□ -1.5
CDC7	YDL017W	YFL054C	P43549	646 aa		5.69	□□□□□ -1.5
CDC7	YDL017W	RDL1	Q12305	139 aa	Known RBP	5.69	□□□□□ -1.5
CDC7	YDL017W	YCR024C-B	Q3E7Z8	88 aa		5.69	□□□□□ -1.5
CDC7	YDL017W	MEC1	P38111	2368 aa		5.68	□□□□□ -1.5
CDC7	YDL017W	COX2	P00410	251 aa		5.68	□□□□□ -1.5
CDC7	YDL017W	MRPL38	P35996	138 aa	Predicted RBP	5.68	□□□□□ -1.5
CDC7	YDL017W	YPT10	P38146	199 aa		5.68	□□□□□ -1.5
CDC7	YDL017W	IMP2	P46972	177 aa		5.68	□□□□□ -1.5
CDC7	YDL017W	YDL183C	P48569	320 aa		5.68	□□□□□ -1.5
CDC7	YDL017W	GIM5	Q04493	163 aa		5.68	□□□□□ -1.5
CDC7	YDL017W	IRC23	Q08416	157 aa		5.68	□□□□□ -1.5
CDC7	YDL017W	ERG27	Q12452	347 aa	Known RBP	5.68	□□□□□ -1.5
CDC7	YDL017W	RPS22B	Q3E7Y3	130 aa	Known RBP	5.68	□□□□□ -1.5
CDC7	YDL017W	PHO85	P17157	305 aa		5.67	□□□□□ -1.5
CDC7	YDL017W	YPS1	P32329	569 aa		5.67	□□□□□ -1.5
CDC7	YDL017W	SCM4	P32564	187 aa		5.67	□□□□□ -1.5
CDC7	YDL017W	FZF1	P32805	299 aa		5.67	□□□□□ -1.5
CDC7	YDL017W	GLE2	P40066	365 aa		5.67	□□□□□ -1.5
CDC7	YDL017W	GPP2	P40106	250 aa	Known RBP	5.67	□□□□□ -1.5
CDC7	YDL017W	WWM1	P43582	211 aa	Known RBP	5.67	□□□□□ -1.5
CDC7	YDL017W	YJL027C	P47063	138 aa	Predicted RBP	5.67	□□□□□ -1.5
CDC7	YDL017W	BNA1	P47096	177 aa		5.67	□□□□□ -1.5
CDC7	YDL017W	SWT21	P53873	357 aa	Predicted RBP	5.67	□□□□□ -1.5
CDC7	YDL017W	SPO24	Q3E752	67 aa		5.67	□□□□□ -1.5
CDC7	YDL017W	VMA11	P32842	164 aa		5.66	□□□□□ -1.5
CDC7	YDL017W	TIR2	P33890	251 aa		5.66	□□□□□ -1.5
CDC7	YDL017W	MRPL11	P36521	249 aa	Predicted RBP	5.66	□□□□□ -1.5
CDC7	YDL017W	COX18	P53239	316 aa		5.66	□□□□□ -1.5
CDC7	YDL017W	IZH1	Q03419	316 aa		5.66	□□□□□ -1.5
CDC7	YDL017W	PBP4	Q07362	185 aa	Known RBP	5.66	□□□□□ -1.5
CDC7	YDL017W	FUN14	P18411	198 aa		5.65	□□□□□ -1.5
CDC7	YDL017W	HTB2	P02294	131 aa		5.64	□□□□□ -1.51
CDC7	YDL017W	MRPL44	P19956	98 aa		5.64	□□□□□ -1.51
CDC7	YDL017W	AME1	P38313	324 aa		5.64	□□□□□ -1.51
CDC7	YDL017W	YIL077C	P40508	320 aa		5.64	□□□□□ -1.51
CDC7	YDL017W	ABM1	P47146	123 aa		5.64	□□□□□ -1.51
CDC7	YDL017W	DUG3	P53871	357 aa		5.64	□□□□□ -1.51
CDC7	YDL017W	YER190C-B	P0CX94	160 aa		5.64	□□□□□ -1.51
CDC7	YDL017W	YEL077W-A	P0CX95	160 aa		5.64	□□□□□ -1.51
CDC7	YDL017W	YGR296C-B	P0CX96	160 aa		5.64	□□□□□ -1.51
CDC7	YDL017W	YPL283W-B	P0CX97	160 aa		5.64	□□□□□ -1.51
CDC7	YDL017W	YPR204C-A	P0CX98	160 aa		5.64	□□□□□ -1.51
CDC7	YDL017W	MRPL31	P14063	131 aa	Predicted RBP	5.64	□□□□□ -1.51
CDC7	YDL017W	MBB1	P39534	108 aa		5.64	□□□□□ -1.51
CDC7	YDL017W	CDC40	P40968	455 aa	Predicted RBP	5.64	□□□□□ -1.51
CDC7	YDL017W	YFR045W	P43617	309 aa		5.64	□□□□□ -1.51
CDC7	YDL017W	RPA43	P46669	326 aa		5.64	□□□□□ -1.51
CDC7	YDL017W	AIM24	P47127	394 aa		5.64	□□□□□ -1.51
CDC7	YDL017W	YMR317W	Q04893	1140 aa		5.64	□□□□□ -1.51
CDC7	YDL017W	TIM18	Q08749	192 aa		5.64	□□□□□ -1.51
CDC7	YDL017W	BPH1	P25356	2167 aa		5.63	□□□□□ -1.51
CDC7	YDL017W	CYC3	P06182	269 aa		5.63	□□□□□ -1.51
CDC7	YDL017W	SEC4	P07560	215 aa	Known RBP	5.63	□□□□□ -1.51
CDC7	YDL017W	RPL31B	P0C2H9	113 aa	Known RBP	5.63	□□□□□ -1.51
CDC7	YDL017W	YKL102C	P34249	101 aa		5.63	□□□□□ -1.51
CDC7	YDL017W	SNU13	P39990	126 aa	Known RBP	5.63	□□□□□ -1.51
CDC7	YDL017W	YMR141C	P40211	102 aa		5.63	□□□□□ -1.51
CDC7	YDL017W	TDA4	P47153	279 aa		5.63	□□□□□ -1.51
CDC7	YDL017W	YGR219W	P53307	113 aa		5.63	□□□□□ -1.51
CDC7	YDL017W	DAD4	P69851	72 aa		5.63	□□□□□ -1.51
CDC7	YDL017W	TRI1	Q05024	226 aa		5.63	□□□□□ -1.51
CDC7	YDL017W	ATG33	Q06485	197 aa		5.63	□□□□□ -1.51
CDC7	YDL017W	MRPL20	P22354	195 aa	Predicted RBP	5.62	□□□□□ -1.51
CDC7	YDL017W	ZRT1	P32804	376 aa		5.62	□□□□□ -1.51
CDC7	YDL017W	YER134C	P40081	178 aa		5.62	□□□□□ -1.51
CDC7	YDL017W	YDR215C	Q12240	137 aa		5.62	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms