RNA–Protein interactions for RNA: YCR012W

PGK1, Transcript of 3-phosphoglycerate kinase, yeast

Gene PGK1, Length 1,251 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PGK1	YCR012W	MIG1	P27705	504 aa		4.96	□□□□□ -1.62
PGK1	YCR012W	YGP1	P38616	354 aa	Known RBP	4.96	□□□□□ -1.62
PGK1	YCR012W	DOG2	P38773	246 aa		4.96	□□□□□ -1.62
PGK1	YCR012W	SEC72	P39742	193 aa	Known RBP	4.96	□□□□□ -1.62
PGK1	YCR012W	SDS23	P53172	527 aa		4.96	□□□□□ -1.62
PGK1	YCR012W	MRX11	Q03079	207 aa		4.96	□□□□□ -1.62
PGK1	YCR012W	NDE2	Q07500	545 aa		4.96	□□□□□ -1.62
PGK1	YCR012W	GAT3	Q07928	141 aa		4.96	□□□□□ -1.62
PGK1	YCR012W	YCR022C	P25620	114 aa		4.95	□□□□□ -1.62
PGK1	YCR012W	UTR5	P32630	166 aa		4.95	□□□□□ -1.62
PGK1	YCR012W	SOR1	P35497	357 aa	Known RBP	4.95	□□□□□ -1.62
PGK1	YCR012W	YPT10	P38146	199 aa		4.95	□□□□□ -1.62
PGK1	YCR012W	SFT2	P38166	215 aa		4.95	□□□□□ -1.62
PGK1	YCR012W	HUA1	P40325	198 aa		4.95	□□□□□ -1.62
PGK1	YCR012W	HAC1	P41546	238 aa		4.95	□□□□□ -1.62
PGK1	YCR012W	YFL015C	P43578	164 aa		4.95	□□□□□ -1.62
PGK1	YCR012W	BNA2	P47125	453 aa		4.95	□□□□□ -1.62
PGK1	YCR012W	YGR018C	P53211	109 aa		4.95	□□□□□ -1.62
PGK1	YCR012W	TOM7	P53507	60 aa		4.95	□□□□□ -1.62
PGK1	YCR012W	CRZ1	P53968	678 aa		4.95	□□□□□ -1.62
PGK1	YCR012W	SDH7	Q04401	133 aa		4.95	□□□□□ -1.62
PGK1	YCR012W	SOR2	Q07786	357 aa		4.95	□□□□□ -1.62
PGK1	YCR012W	YPL162C	Q12042	273 aa		4.95	□□□□□ -1.62
PGK1	YCR012W	RKI1	Q12189	258 aa		4.95	□□□□□ -1.62
PGK1	YCR012W	WIP1	Q2V2P8	89 aa		4.95	□□□□□ -1.62
PGK1	YCR012W	YMR105W-A	Q8TGS8	64 aa		4.95	□□□□□ -1.62
PGK1	YCR012W	COX2	P00410	251 aa		4.94	□□□□□ -1.62
PGK1	YCR012W	MRS1	P07266	363 aa		4.94	□□□□□ -1.62
PGK1	YCR012W	MOH1	P38191	138 aa		4.94	□□□□□ -1.62
PGK1	YCR012W	LST8	P41318	303 aa		4.94	□□□□□ -1.62
PGK1	YCR012W	GZF3	P42944	551 aa	Known RBP	4.94	□□□□□ -1.62
PGK1	YCR012W	YGL230C	P53074	147 aa		4.94	□□□□□ -1.62
PGK1	YCR012W	YGR151C	P53287	111 aa		4.94	□□□□□ -1.62
PGK1	YCR012W	YDR366C	P87287	132 aa		4.94	□□□□□ -1.62
PGK1	YCR012W	API2	Q04413	109 aa		4.94	□□□□□ -1.62
PGK1	YCR012W	ERF2	Q06551	359 aa		4.94	□□□□□ -1.62
PGK1	YCR012W	YOR029W	Q12243	111 aa		4.94	□□□□□ -1.62
PGK1	YCR012W	PRP8	P33334	2413 aa	Known RBP	4.93	□□□□□ -1.62
PGK1	YCR012W	RPL23A	P0CX41	137 aa	Known RBP	4.93	□□□□□ -1.62
PGK1	YCR012W	RPL23B	P0CX42	137 aa	Known RBP	4.93	□□□□□ -1.62
PGK1	YCR012W	MRPL31	P14063	131 aa	Predicted RBP	4.93	□□□□□ -1.62
PGK1	YCR012W	SEC11	P15367	167 aa		4.93	□□□□□ -1.62
PGK1	YCR012W	FZF1	P32805	299 aa		4.93	□□□□□ -1.62
PGK1	YCR012W	LSM2	P38203	95 aa	Known RBP	4.93	□□□□□ -1.62
PGK1	YCR012W	YBR220C	P38318	560 aa		4.93	□□□□□ -1.62
PGK1	YCR012W	PAU7	P39545	55 aa		4.93	□□□□□ -1.62
PGK1	YCR012W	MSL1	P40567	111 aa	Predicted RBP	4.93	□□□□□ -1.62
PGK1	YCR012W	THG1	P53215	237 aa	Known RBP	4.93	□□□□□ -1.62
PGK1	YCR012W	ARC18	Q05933	178 aa	Known RBP	4.93	□□□□□ -1.62
PGK1	YCR012W	FSF1	Q12029	327 aa	Known RBP	4.93	□□□□□ -1.62
PGK1	YCR012W	YDR215C	Q12240	137 aa		4.93	□□□□□ -1.62
PGK1	YCR012W	HFA1	P32874	2273 aa		4.92	□□□□□ -1.62
PGK1	YCR012W	CYC3	P06182	269 aa		4.92	□□□□□ -1.62
PGK1	YCR012W	FEN2	P25621	512 aa	Known RBP	4.92	□□□□□ -1.62
PGK1	YCR012W	MTR2	P34232	184 aa	Known RBP	4.92	□□□□□ -1.62
PGK1	YCR012W	FYV4	P38783	130 aa	Predicted RBP	4.92	□□□□□ -1.62
PGK1	YCR012W	YFL051C	P43552	160 aa		4.92	□□□□□ -1.62
PGK1	YCR012W	YFR045W	P43617	309 aa		4.92	□□□□□ -1.62
PGK1	YCR012W	BRP1	P53194	125 aa		4.92	□□□□□ -1.62
PGK1	YCR012W	HST4	P53688	370 aa		4.92	□□□□□ -1.62
PGK1	YCR012W	YTH1	Q06102	208 aa	Predicted RBP	4.92	□□□□□ -1.62
PGK1	YCR012W	ATG33	Q06485	197 aa		4.92	□□□□□ -1.62
PGK1	YCR012W	YFL068W	P0CX99	160 aa		4.91	□□□□□ -1.62
PGK1	YCR012W	YLL066W-A	P0CY00	160 aa		4.91	□□□□□ -1.62
PGK1	YCR012W	YLL067W-A	P0CY01	160 aa		4.91	□□□□□ -1.62
PGK1	YCR012W	MDM10	P18409	493 aa		4.91	□□□□□ -1.62
PGK1	YCR012W	PRS4	P38063	326 aa	Predicted RBP	4.91	□□□□□ -1.62
PGK1	YCR012W	YNL200C	P40165	246 aa	Known RBP	4.91	□□□□□ -1.62
PGK1	YCR012W	MIC26	P50087	233 aa		4.91	□□□□□ -1.62
PGK1	YCR012W	DAD4	P69851	72 aa		4.91	□□□□□ -1.62
PGK1	YCR012W	MSC3	Q05812	728 aa		4.91	□□□□□ -1.62
PGK1	YCR012W	YLR050C	Q12155	161 aa	Known RBP	4.91	□□□□□ -1.62
PGK1	YCR012W	AYT1	Q12226	474 aa		4.91	□□□□□ -1.62
PGK1	YCR012W	SCS22	Q6Q595	175 aa		4.91	□□□□□ -1.62
PGK1	YCR012W	ADE8	P04161	214 aa		4.9	□□□□□ -1.63
PGK1	YCR012W	DDI2	P0CH63	225 aa		4.9	□□□□□ -1.63
PGK1	YCR012W	DDI3	P0CH64	225 aa		4.9	□□□□□ -1.63
PGK1	YCR012W	RPL43A	P0CX25	92 aa	Known RBP	4.9	□□□□□ -1.63
PGK1	YCR012W	RPL43B	P0CX26	92 aa		4.9	□□□□□ -1.63
PGK1	YCR012W	RPI1	P23250	407 aa	Known RBP	4.9	□□□□□ -1.63
PGK1	YCR012W	RRT1	P38192	103 aa		4.9	□□□□□ -1.63
PGK1	YCR012W	YHL037C	P38733	133 aa		4.9	□□□□□ -1.63
PGK1	YCR012W	YER188W	P40103	239 aa		4.9	□□□□□ -1.63
PGK1	YCR012W	POP3	P53833	195 aa	Predicted RBP	4.9	□□□□□ -1.63
PGK1	YCR012W	YNL046W	P53956	172 aa		4.9	□□□□□ -1.63
PGK1	YCR012W	SED1	Q01589	338 aa		4.9	□□□□□ -1.63
PGK1	YCR012W	UPS3	Q04006	179 aa		4.9	□□□□□ -1.63
PGK1	YCR012W	GRH1	Q04410	372 aa	Known RBP	4.9	□□□□□ -1.63
PGK1	YCR012W	DPP1	Q05521	289 aa		4.9	□□□□□ -1.63
PGK1	YCR012W	TIM18	Q08749	192 aa		4.9	□□□□□ -1.63
PGK1	YCR012W	DAD1	Q12248	94 aa		4.9	□□□□□ -1.63
PGK1	YCR012W	YIL002W-A	Q3E7Z5	69 aa		4.9	□□□□□ -1.63
PGK1	YCR012W	HTL1	Q9URQ5	78 aa		4.9	□□□□□ -1.63
PGK1	YCR012W	HTB2	P02294	131 aa		4.89	□□□□□ -1.63
PGK1	YCR012W	YPR170W-B	P0C5R9	85 aa		4.89	□□□□□ -1.63
PGK1	YCR012W	YPS1	P32329	569 aa		4.89	□□□□□ -1.63
PGK1	YCR012W	TIR2	P33890	251 aa		4.89	□□□□□ -1.63
PGK1	YCR012W	ELF1	P36053	145 aa		4.89	□□□□□ -1.63
PGK1	YCR012W	ADH5	P38113	351 aa	Known RBP	4.89	□□□□□ -1.63
PGK1	YCR012W	RPF1	P38805	295 aa	Known RBP	4.89	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 71.9 ms