RNA–Protein interactions for RNA: YBL041W

PRE7, Transcript of Beta 6 subunit of the 20S proteasome, yeastyeast

Gene PRE7, Length 726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE7YBL041W YMR244WQ04018 355 aa3.75□□□□□ -1.81
PRE7YBL041W SHH3Q04487 196 aa3.75□□□□□ -1.81
PRE7YBL041W ZRC1P20107 442 aa3.74□□□□□ -1.81
PRE7YBL041W SHB17P36136 271 aaKnown RBP3.74□□□□□ -1.81
PRE7YBL041W PET100P38958 111 aa3.74□□□□□ -1.81
PRE7YBL041W YEA4P40004 342 aa3.74□□□□□ -1.81
PRE7YBL041W LCB3P47013 409 aa3.74□□□□□ -1.81
PRE7YBL041W YJR111CP47148 283 aaKnown RBP3.74□□□□□ -1.81
PRE7YBL041W IZH1Q03419 316 aa3.74□□□□□ -1.81
PRE7YBL041W PRM7Q12459 698 aa3.74□□□□□ -1.81
PRE7YBL041W RPL42AP0CX27 106 aaKnown RBP3.73□□□□□ -1.81
PRE7YBL041W RPL42BP0CX28 106 aaKnown RBP3.73□□□□□ -1.81
PRE7YBL041W QCR9P22289 66 aa3.73□□□□□ -1.81
PRE7YBL041W LSM2P38203 95 aaKnown RBP3.73□□□□□ -1.81
PRE7YBL041W YGR025WP53216 100 aa3.73□□□□□ -1.81
PRE7YBL041W MRPS8Q03799 155 aa3.73□□□□□ -1.81
PRE7YBL041W CTR3Q06686 241 aa3.73□□□□□ -1.81
PRE7YBL041W YOL160WQ08321 113 aa3.73□□□□□ -1.81
PRE7YBL041W YPR063CQ12160 140 aa3.73□□□□□ -1.81
PRE7YBL041W YER175W-AQ8TGU4 54 aa3.73□□□□□ -1.81
PRE7YBL041W DDI2P0CH63 225 aa3.72□□□□□ -1.81
PRE7YBL041W DDI3P0CH64 225 aa3.72□□□□□ -1.81
PRE7YBL041W SAR1P20606 190 aaKnown RBP3.72□□□□□ -1.81
PRE7YBL041W TIR2P33890 251 aa3.72□□□□□ -1.81
PRE7YBL041W YBL059WP34224 193 aa3.72□□□□□ -1.81
PRE7YBL041W PHD1P36093 366 aa3.72□□□□□ -1.81
PRE7YBL041W DER1P38307 211 aa3.72□□□□□ -1.81
PRE7YBL041W VMA22P38784 181 aa3.72□□□□□ -1.81
PRE7YBL041W YMR007WQ03675 126 aa3.72□□□□□ -1.81
PRE7YBL041W FCF2Q12035 217 aaPredicted RBP3.72□□□□□ -1.81
PRE7YBL041W AHT1P29589 182 aa3.71□□□□□ -1.82
PRE7YBL041W ACP1P32463 125 aa3.71□□□□□ -1.82
PRE7YBL041W YER135CP40082 130 aa3.71□□□□□ -1.82
PRE7YBL041W MCM22P47167 239 aa3.71□□□□□ -1.82
PRE7YBL041W YNR066CP53752 436 aa3.71□□□□□ -1.82
PRE7YBL041W ANT1Q06497 328 aa3.71□□□□□ -1.82
PRE7YBL041W LOA1Q06508 300 aa3.71□□□□□ -1.82
PRE7YBL041W RPL2AP0CX45 254 aaKnown RBP3.7□□□□□ -1.82
PRE7YBL041W RPL2BP0CX46 254 aaKnown RBP3.7□□□□□ -1.82
PRE7YBL041W GCN3P14741 305 aa3.7□□□□□ -1.82
PRE7YBL041W MAG1P22134 296 aaKnown RBP3.7□□□□□ -1.82
PRE7YBL041W SPO13P23624 291 aa3.7□□□□□ -1.82
PRE7YBL041W CDC50P25656 391 aa3.7□□□□□ -1.82
PRE7YBL041W EMP24P32803 203 aaKnown RBP3.7□□□□□ -1.82
PRE7YBL041W MIG3P39943 394 aa3.7□□□□□ -1.82
PRE7YBL041W TAD2P47058 250 aa3.7□□□□□ -1.82
PRE7YBL041W RIB4P50861 169 aaPredicted RBP3.7□□□□□ -1.82
PRE7YBL041W MRX11Q03079 207 aa3.7□□□□□ -1.82
PRE7YBL041W MRPS17Q03246 237 aaPredicted RBP3.7□□□□□ -1.82
PRE7YBL041W AVO2Q04749 426 aa3.7□□□□□ -1.82
PRE7YBL041W CCW12Q12127 133 aa3.7□□□□□ -1.82
PRE7YBL041W YPR145C-AQ2V2P0 78 aa3.7□□□□□ -1.82
PRE7YBL041W UBI4P0CG63 381 aaKnown RBP3.69□□□□□ -1.82
PRE7YBL041W RPS11AP0CX47 156 aaKnown RBP3.69□□□□□ -1.82
PRE7YBL041W RPS11BP0CX48 156 aaKnown RBP3.69□□□□□ -1.82
PRE7YBL041W HSP12P22943 109 aaKnown RBP3.69□□□□□ -1.82
PRE7YBL041W YBR292CP38357 123 aa3.69□□□□□ -1.82
PRE7YBL041W ASP1P38986 381 aaPredicted RBP3.69□□□□□ -1.82
PRE7YBL041W MBB1P39534 108 aa3.69□□□□□ -1.82
PRE7YBL041W PRE5P40302 234 aaKnown RBP3.69□□□□□ -1.82
PRE7YBL041W SNX4P47057 423 aa3.69□□□□□ -1.82
PRE7YBL041W SRB7P47822 140 aa3.69□□□□□ -1.82
PRE7YBL041W MRPL50P53724 139 aa3.69□□□□□ -1.82
PRE7YBL041W ATC1Q04005 294 aa3.69□□□□□ -1.82
PRE7YBL041W VAM10Q08474 114 aa3.69□□□□□ -1.82
PRE7YBL041W YMR230W-AQ3E7B5 62 aa3.69□□□□□ -1.82
PRE7YBL041W RPS2P25443 254 aaKnown RBP3.68□□□□□ -1.82
PRE7YBL041W YHR022CP38763 256 aa3.68□□□□□ -1.82
PRE7YBL041W GCV3P39726 170 aaPredicted RBP3.68□□□□□ -1.82
PRE7YBL041W DSK2P48510 373 aa3.68□□□□□ -1.82
PRE7YBL041W CAF40P53829 373 aa3.68□□□□□ -1.82
PRE7YBL041W HAL1Q01766 294 aa3.68□□□□□ -1.82
PRE7YBL041W SGF11Q03067 99 aa3.68□□□□□ -1.82
PRE7YBL041W FIT2Q08906 153 aa3.68□□□□□ -1.82
PRE7YBL041W ERV2Q12284 196 aa3.68□□□□□ -1.82
PRE7YBL041W TMA17Q12513 150 aa3.68□□□□□ -1.82
PRE7YBL041W YGL194C-AQ2V2P6 80 aa3.68□□□□□ -1.82
PRE7YBL041W MRS1P07266 363 aa3.67□□□□□ -1.82
PRE7YBL041W RPB3P16370 318 aaKnown RBP3.67□□□□□ -1.82
PRE7YBL041W MRPL20P22354 195 aaPredicted RBP3.67□□□□□ -1.82
PRE7YBL041W ECM25P32525 599 aa3.67□□□□□ -1.82
PRE7YBL041W FMP41P53889 259 aaKnown RBP3.67□□□□□ -1.82
PRE7YBL041W YCR001WP25347 104 aa3.66□□□□□ -1.82
PRE7YBL041W SPI1P40092 148 aa3.66□□□□□ -1.82
PRE7YBL041W YOR015WQ12169 119 aa3.66□□□□□ -1.82
PRE7YBL041W HTB2P02294 131 aa3.65□□□□□ -1.83
PRE7YBL041W VMA16P23968 213 aa3.65□□□□□ -1.83
PRE7YBL041W TRS20P38334 175 aa3.65□□□□□ -1.83
PRE7YBL041W VHS2P40463 436 aa3.65□□□□□ -1.83
PRE7YBL041W SMD3P43321 101 aaKnown RBP3.65□□□□□ -1.83
PRE7YBL041W TMA23Q03525 211 aa3.65□□□□□ -1.83
PRE7YBL041W YCR075W-AQ3E830 75 aa3.65□□□□□ -1.83
PRE7YBL041W VAR1P02381 398 aa3.64□□□□□ -1.83
PRE7YBL041W CPT1P17898 393 aa3.64□□□□□ -1.83
PRE7YBL041W YHR173CP38864 112 aa3.64□□□□□ -1.83
PRE7YBL041W SPC25P40014 221 aa3.64□□□□□ -1.83
PRE7YBL041W JAC1P53193 184 aa3.64□□□□□ -1.83
PRE7YBL041W ADD37Q03233 198 aa3.64□□□□□ -1.83
PRE7YBL041W YBR126W-AQ8TGU7 68 aa3.64□□□□□ -1.83
PRE7YBL041W MRP2P10663 115 aaPredicted RBP3.63□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 33.9 ms