RNA–Protein interactions for RNA: RUF22

RUF22, Transcript of RNA of Unknown Function, yeast

Gene RUF22, Length 515 nt, Biotype ncRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RUF22	RUF22	RPS28A	Q3E7X9	67 aa	Predicted RBP	0.47	□□□□□ -2.33
RUF22	RUF22	YCR001W	P25347	104 aa		0.46	□□□□□ -2.34
RUF22	RUF22	YBR027C	P38220	110 aa		0.46	□□□□□ -2.34
RUF22	RUF22	ORM1	P53224	222 aa		0.46	□□□□□ -2.34
RUF22	RUF22	RCF2	P53721	224 aa		0.46	□□□□□ -2.34
RUF22	RUF22	FMN1	Q03778	218 aa		0.46	□□□□□ -2.34
RUF22	RUF22	YDL241W	Q07738	123 aa		0.46	□□□□□ -2.34
RUF22	RUF22	NSL1	Q12143	216 aa		0.46	□□□□□ -2.34
RUF22	RUF22	EFG1	Q3E705	233 aa	Known RBP	0.46	□□□□□ -2.34
RUF22	RUF22	YHR213W-B	Q8TGK1	99 aa		0.46	□□□□□ -2.34
RUF22	RUF22	HAP2	P06774	265 aa		0.45	□□□□□ -2.34
RUF22	RUF22	YOL013W-A	P0C272	63 aa	Predicted RBP	0.45	□□□□□ -2.34
RUF22	RUF22	FIP1	P45976	327 aa		0.45	□□□□□ -2.34
RUF22	RUF22	VMA10	P48836	114 aa	Known RBP	0.45	□□□□□ -2.34
RUF22	RUF22	RFU1	Q08003	200 aa		0.45	□□□□□ -2.34
RUF22	RUF22	RPS22A	P0C0W1	130 aa	Known RBP	0.44	□□□□□ -2.34
RUF22	RUF22	MRS4	P23500	304 aa		0.44	□□□□□ -2.34
RUF22	RUF22	SRP21	P32342	167 aa		0.44	□□□□□ -2.34
RUF22	RUF22	HSP150	P32478	413 aa		0.44	□□□□□ -2.34
RUF22	RUF22	SRL3	P36167	246 aa		0.44	□□□□□ -2.34
RUF22	RUF22	DER1	P38307	211 aa		0.44	□□□□□ -2.34
RUF22	RUF22	SLM6	P38343	150 aa		0.44	□□□□□ -2.34
RUF22	RUF22	YER181C	P40097	107 aa		0.44	□□□□□ -2.34
RUF22	RUF22	GPI2	P46961	280 aa		0.44	□□□□□ -2.34
RUF22	RUF22	YNL122C	P53921	115 aa	Predicted RBP	0.44	□□□□□ -2.34
RUF22	RUF22	SED1	Q01589	338 aa		0.44	□□□□□ -2.34
RUF22	RUF22	TLG1	Q03322	224 aa		0.44	□□□□□ -2.34
RUF22	RUF22	IRC21	Q04772	201 aa		0.44	□□□□□ -2.34
RUF22	RUF22	YPR153W	Q06537	140 aa		0.44	□□□□□ -2.34
RUF22	RUF22	IRC19	Q07843	230 aa		0.44	□□□□□ -2.34
RUF22	RUF22	YPR202W	Q08993	238 aa		0.44	□□□□□ -2.34
RUF22	RUF22	RPS22B	Q3E7Y3	130 aa	Known RBP	0.44	□□□□□ -2.34
RUF22	RUF22	HSL1	P34244	1518 aa		0.43	□□□□□ -2.34
RUF22	RUF22	RPL33A	P05744	107 aa	Known RBP	0.43	□□□□□ -2.34
RUF22	RUF22	NHP6A	P11632	93 aa	Known RBP	0.43	□□□□□ -2.34
RUF22	RUF22	PHO13	P19881	312 aa		0.43	□□□□□ -2.34
RUF22	RUF22	MRPL24	P36525	258 aa	Predicted RBP	0.43	□□□□□ -2.34
RUF22	RUF22	ATG8	P38182	117 aa	RIP-Chip data	0.43	□□□□□ -2.34	not detected
RUF22	RUF22	FIG1	P38224	298 aa		0.43	□□□□□ -2.34
RUF22	RUF22	IPT1	P38954	527 aa		0.43	□□□□□ -2.34
RUF22	RUF22	YJL009W	P47078	108 aa		0.43	□□□□□ -2.34
RUF22	RUF22	GPI11	Q06636	219 aa		0.43	□□□□□ -2.34
RUF22	RUF22	HUT1	Q12520	339 aa		0.43	□□□□□ -2.34
RUF22	RUF22	CMC4	Q3E7A9	73 aa		0.43	□□□□□ -2.34
RUF22	RUF22	SCS22	Q6Q595	175 aa		0.43	□□□□□ -2.34
RUF22	RUF22	HHY1	P39982	102 aa		0.42	□□□□□ -2.34
RUF22	RUF22	MGR2	Q02889	113 aa		0.42	□□□□□ -2.34
RUF22	RUF22	EST3	Q03096	181 aa		0.42	□□□□□ -2.34
RUF22	RUF22	PKR1	Q03880	122 aa	Known RBP	0.42	□□□□□ -2.34
RUF22	RUF22	RAV2	Q03956	351 aa		0.42	□□□□□ -2.34
RUF22	RUF22	PRM3	Q08931	133 aa		0.42	□□□□□ -2.34
RUF22	RUF22	ROM2	P51862	1356 aa	Known RBP	0.42	□□□□□ -2.34
RUF22	RUF22	HFA1	P32874	2273 aa		0.41	□□□□□ -2.34
RUF22	RUF22	DDR48	P18899	430 aa	Known RBP	0.41	□□□□□ -2.34
RUF22	RUF22	YJL218W	P40892	196 aa	Known RBP	0.41	□□□□□ -2.34
RUF22	RUF22	SEN15	Q04675	128 aa		0.41	□□□□□ -2.34
RUF22	RUF22	MHF1	Q3E835	90 aa		0.41	□□□□□ -2.34
RUF22	RUF22	KTI11	Q3E840	82 aa		0.41	□□□□□ -2.34
RUF22	RUF22	COA6	Q3E846	104 aa		0.41	□□□□□ -2.34
RUF22	RUF22	RIB3	Q99258	208 aa		0.41	□□□□□ -2.34
RUF22	RUF22	PET20	Q99373	253 aa		0.41	□□□□□ -2.34
RUF22	RUF22	UBR1	P19812	1950 aa		0.4	□□□□□ -2.35
RUF22	RUF22	ANB1	P19211	157 aa		0.4	□□□□□ -2.35
RUF22	RUF22	HSP12	P22943	109 aa	Known RBP	0.4	□□□□□ -2.35
RUF22	RUF22	YMR141C	P40211	102 aa		0.4	□□□□□ -2.35
RUF22	RUF22	SPG1	P50088	95 aa		0.4	□□□□□ -2.35
RUF22	RUF22	YDR366C	P87287	132 aa		0.4	□□□□□ -2.35
RUF22	RUF22	RAF1	Q06891	181 aa		0.4	□□□□□ -2.35
RUF22	RUF22	YOR1	P53049	1477 aa		0.4	□□□□□ -2.35
RUF22	RUF22	YGL014C-A	P0C5N1	53 aa		0.39	□□□□□ -2.35
RUF22	RUF22	PET54	P10834	293 aa		0.39	□□□□□ -2.35
RUF22	RUF22	FUN14	P18411	198 aa		0.39	□□□□□ -2.35
RUF22	RUF22	SUI1	P32911	108 aa	Known RBP	0.39	□□□□□ -2.35
RUF22	RUF22	LSM8	P47093	109 aa	Known RBP	0.39	□□□□□ -2.35
RUF22	RUF22	DIE2	P50076	525 aa		0.39	□□□□□ -2.35
RUF22	RUF22	NAT5	Q08689	176 aa		0.39	□□□□□ -2.35
RUF22	RUF22	CDC39	P25655	2108 aa	Known RBP	0.38	□□□□□ -2.35
RUF22	RUF22	COX5B	P00425	151 aa		0.38	□□□□□ -2.35
RUF22	RUF22	MRPL44	P19956	98 aa		0.38	□□□□□ -2.35
RUF22	RUF22	RPS1B	P23248	255 aa	Known RBP	0.38	□□□□□ -2.35
RUF22	RUF22	FYV5	P25585	152 aa		0.38	□□□□□ -2.35
RUF22	RUF22	ARC19	P33204	171 aa	Known RBP	0.38	□□□□□ -2.35
RUF22	RUF22	IPI1	P38803	334 aa	Predicted RBP	0.38	□□□□□ -2.35
RUF22	RUF22	YHR140W	P38842	239 aa		0.38	□□□□□ -2.35
RUF22	RUF22	LSM1	P47017	172 aa	Known RBP	0.38	□□□□□ -2.35
RUF22	RUF22	MOG1	P47123	218 aa		0.38	□□□□□ -2.35
RUF22	RUF22	EFM5	P53200	248 aa	Known RBP	0.38	□□□□□ -2.35
RUF22	RUF22	YNL019C	P53975	284 aa		0.38	□□□□□ -2.35
RUF22	RUF22	YCL001W-A	P87012	153 aa		0.38	□□□□□ -2.35
RUF22	RUF22	YMR122C	Q03879	124 aa		0.38	□□□□□ -2.35
RUF22	RUF22	SOM1	Q05676	74 aa		0.38	□□□□□ -2.35
RUF22	RUF22	PFY1	P07274	126 aa		0.37	□□□□□ -2.35
RUF22	RUF22	RPL43A	P0CX25	92 aa	Known RBP	0.37	□□□□□ -2.35
RUF22	RUF22	RPL43B	P0CX26	92 aa		0.37	□□□□□ -2.35
RUF22	RUF22	RPC19	P28000	142 aa	Known RBP	0.37	□□□□□ -2.35
RUF22	RUF22	RME1	P32338	300 aa	Known RBP	0.37	□□□□□ -2.35
RUF22	RUF22	PHB1	P40961	287 aa		0.37	□□□□□ -2.35
RUF22	RUF22	HHO1	P53551	258 aa		0.37	□□□□□ -2.35
RUF22	RUF22	DDP1	Q99321	188 aa	Known RBP	0.37	□□□□□ -2.35
RUF22	RUF22	YHR213W	P0CI67	198 aa		0.36	□□□□□ -2.35

Retrieved 100 of 5,963 RNA–protein pairs in 49.2 ms