RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 FLOT2Q14254 428 aa15.29■□□□□ 0.04
VPS36-207ENST00000611132 TRIM67Q6ZTA4 783 aa15.29■□□□□ 0.04
VPS36-207ENST00000611132 SV2AQ7L0J3 742 aa15.29■□□□□ 0.04
VPS36-207ENST00000611132 SLC25A41Q8N5S1 370 aa15.29■□□□□ 0.04
VPS36-207ENST00000611132 TMC2Q8TDI7 906 aa15.29■□□□□ 0.04
VPS36-207ENST00000611132 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.29■□□□□ 0.04
VPS36-207ENST00000611132 STRNO43815 780 aa15.28■□□□□ 0.04
VPS36-207ENST00000611132 KRT36O76013 467 aa15.28■□□□□ 0.04
VPS36-207ENST00000611132 ZNF568Q3ZCX4 644 aa15.28■□□□□ 0.04
VPS36-207ENST00000611132 DCAF15Q66K64 600 aa15.28■□□□□ 0.04
VPS36-207ENST00000611132 KLC3Q6P597 504 aa15.28■□□□□ 0.04
VPS36-207ENST00000611132 HHIPL2Q6UWX4 724 aa15.28■□□□□ 0.04
VPS36-207ENST00000611132 TTC8Q8TAM2 541 aa15.28■□□□□ 0.04
VPS36-207ENST00000611132 PIK3R5Q8WYR1 880 aa15.28■□□□□ 0.04
VPS36-207ENST00000611132 AVENQ9NQS1 362 aaPredicted RBP15.28■□□□□ 0.04
VPS36-207ENST00000611132 TBC1D23Q9NUY8 699 aa15.28■□□□□ 0.04
VPS36-207ENST00000611132 HERC5Q9UII4 1024 aaKnown RBP15.28■□□□□ 0.04
VPS36-207ENST00000611132 SLC12A4Q9UP95 1085 aa15.28■□□□□ 0.04
VPS36-207ENST00000611132 WTIPA6NIX2 430 aaPredicted RBP15.28■□□□□ 0.04
VPS36-207ENST00000611132 GNGT2O14610 69 aa15.28■□□□□ 0.04
VPS36-207ENST00000611132 EXTL3O43909 919 aa15.28■□□□□ 0.04
VPS36-207ENST00000611132 TAC1P20366 129 aa15.28■□□□□ 0.04
VPS36-207ENST00000611132 CASP2P42575 452 aa15.28■□□□□ 0.04
VPS36-207ENST00000611132 KIF19Q2TAC6 998 aa15.28■□□□□ 0.04
VPS36-207ENST00000611132 RSPH3Q86UC2 560 aa15.28■□□□□ 0.04
VPS36-207ENST00000611132 LCA5Q86VQ0 697 aa15.28■□□□□ 0.04
VPS36-207ENST00000611132 ACTL9Q8TC94 416 aa15.28■□□□□ 0.04
VPS36-207ENST00000611132 PPP1R36Q96LQ0 422 aa15.28■□□□□ 0.04
VPS36-207ENST00000611132 GPRC5CQ9NQ84 441 aa15.28■□□□□ 0.04
VPS36-207ENST00000611132 FAM86B1E9PN63 330 aa15.28■□□□□ 0.04
VPS36-207ENST00000611132 FAM86B2P0C5J1 330 aa15.28■□□□□ 0.04
VPS36-207ENST00000611132 ALADP13716 330 aa15.28■□□□□ 0.04
VPS36-207ENST00000611132 GSTT1P30711 240 aa15.28■□□□□ 0.04
VPS36-207ENST00000611132 MAPRE2Q15555 327 aa15.28■□□□□ 0.04
VPS36-207ENST00000611132 ECM1Q16610 540 aa15.28■□□□□ 0.04
VPS36-207ENST00000611132 TMA16Q96EY4 203 aaKnown RBP15.28■□□□□ 0.04
VPS36-207ENST00000611132 MRPL4Q9BYD3 311 aaKnown RBP15.28■□□□□ 0.04
VPS36-207ENST00000611132 FGFBP2Q9BYJ0 223 aa15.28■□□□□ 0.04
VPS36-207ENST00000611132 ING2Q9H160 280 aa15.28■□□□□ 0.04
VPS36-207ENST00000611132 SOX13Q9UN79 622 aa15.28■□□□□ 0.04
VPS36-207ENST00000611132 ABHD2P08910 425 aa15.28■□□□□ 0.04
VPS36-207ENST00000611132 ATXN3P54252 364 aaPredicted RBP15.28■□□□□ 0.04
VPS36-207ENST00000611132 PRAMEP78395 509 aa15.28■□□□□ 0.04
VPS36-207ENST00000611132 ITKQ08881 620 aa15.28■□□□□ 0.04
VPS36-207ENST00000611132 CCDC15Q0P6D6 951 aa15.28■□□□□ 0.04
VPS36-207ENST00000611132 CYP2W1Q8TAV3 490 aa15.28■□□□□ 0.04
VPS36-207ENST00000611132 NSUN6Q8TEA1 469 aaKnown RBP15.28■□□□□ 0.04
VPS36-207ENST00000611132 KAT5Q92993 513 aa15.28■□□□□ 0.04
VPS36-207ENST00000611132 CNBD2Q96M20 576 aa15.28■□□□□ 0.04
VPS36-207ENST00000611132 MMADHCQ9H3L0 296 aaPredicted RBP15.28■□□□□ 0.04
VPS36-207ENST00000611132 KCNMB3Q9NPA1 279 aa15.28■□□□□ 0.04
VPS36-207ENST00000611132 ANKEF1Q9NU02 776 aa15.28■□□□□ 0.04
VPS36-207ENST00000611132 HSPA13P48723 471 aa15.27■□□□□ 0.04
VPS36-207ENST00000611132 C3orf67Q6ZVT6 689 aa15.27■□□□□ 0.04
VPS36-207ENST00000611132 ECHDC2Q86YB7 292 aa15.27■□□□□ 0.04
VPS36-207ENST00000611132 VPS39Q96JC1 886 aa15.27■□□□□ 0.04
VPS36-207ENST00000611132 LRRC4Q9HBW1 653 aa15.27■□□□□ 0.04
VPS36-207ENST00000611132 DNPEPQ9ULA0 475 aa15.27■□□□□ 0.04
VPS36-207ENST00000611132 IGSF9BQ9UPX0 1349 aa15.27■□□□□ 0.04
VPS36-207ENST00000611132 FSCN2O14926 492 aa15.27■□□□□ 0.03
VPS36-207ENST00000611132 EDF1O60869 148 aaKnown RBP15.27■□□□□ 0.03
VPS36-207ENST00000611132 SUPT3HO75486 399 aa15.27■□□□□ 0.03
VPS36-207ENST00000611132 SLITRK3O94933 977 aa15.27■□□□□ 0.03
VPS36-207ENST00000611132 GH1P01241 217 aa15.27■□□□□ 0.03
VPS36-207ENST00000611132 SLC44A4Q53GD3 710 aa15.27■□□□□ 0.03
VPS36-207ENST00000611132 SETD3Q86TU7 594 aaPredicted RBP15.27■□□□□ 0.03
VPS36-207ENST00000611132 SP8Q8IXZ3 490 aa15.27■□□□□ 0.03
VPS36-207ENST00000611132 MAB21L3Q8N8X9 362 aa15.27■□□□□ 0.03
VPS36-207ENST00000611132 GJA3Q9Y6H8 435 aa15.27■□□□□ 0.03
VPS36-207ENST00000611132 ARP10275 920 aa15.27■□□□□ 0.03
VPS36-207ENST00000611132 SGSM1Q2NKQ1 1148 aa15.27■□□□□ 0.03
VPS36-207ENST00000611132 WDR72Q3MJ13 1102 aa15.27■□□□□ 0.03
VPS36-207ENST00000611132 TMEM259Q4ZIN3 620 aa15.27■□□□□ 0.03
VPS36-207ENST00000611132 LRRC8EQ6NSJ5 796 aa15.27■□□□□ 0.03
VPS36-207ENST00000611132 RMDN2Q96LZ7 410 aa15.27■□□□□ 0.03
VPS36-207ENST00000611132 SNX25Q9H3E2 840 aa15.27■□□□□ 0.03
VPS36-207ENST00000611132 TOPORSQ9NS56 1045 aaPredicted RBP15.27■□□□□ 0.03
VPS36-207ENST00000611132 NR2E1Q9Y466 385 aa15.27■□□□□ 0.03
VPS36-207ENST00000611132 CASZ1Q86V15 1759 aa15.27■□□□□ 0.03
VPS36-207ENST00000611132 C2CD2LO14523 706 aa15.26■□□□□ 0.03
VPS36-207ENST00000611132 XPO1O14980 1071 aaKnown RBP15.26■□□□□ 0.03
VPS36-207ENST00000611132 ACBD5Q5T8D3 534 aaPredicted RBP15.26■□□□□ 0.03
VPS36-207ENST00000611132 CYP4A22Q5TCH4 519 aa15.26■□□□□ 0.03
VPS36-207ENST00000611132 MTHFD1LQ6UB35 978 aa15.26■□□□□ 0.03
VPS36-207ENST00000611132 PBXIP1Q96AQ6 731 aa15.26■□□□□ 0.03
VPS36-207ENST00000611132 APOPT1Q96IL0 206 aa15.26■□□□□ 0.03
VPS36-207ENST00000611132 ZNF302Q9NR11 478 aa15.26■□□□□ 0.03
VPS36-207ENST00000611132 RNF146Q9NTX7 359 aa15.26■□□□□ 0.03
VPS36-207ENST00000611132 USP21Q9UK80 565 aa15.26■□□□□ 0.03
VPS36-207ENST00000611132 CIITAP33076 1130 aa15.26■□□□□ 0.03
VPS36-207ENST00000611132 ADRM1Q16186 407 aa15.26■□□□□ 0.03
VPS36-207ENST00000611132 SLC30A10Q6XR72 485 aa15.26■□□□□ 0.03
VPS36-207ENST00000611132 LINC00116Q8NCU8 138 aa15.26■□□□□ 0.03
VPS36-207ENST00000611132 CLMNQ96JQ2 1002 aa15.26■□□□□ 0.03
VPS36-207ENST00000611132 BAG5Q9UL15 447 aa15.26■□□□□ 0.03
VPS36-207ENST00000611132 FRMPD4Q14CM0 1322 aa15.26■□□□□ 0.03
VPS36-207ENST00000611132 EML1O00423 815 aa15.26■□□□□ 0.03
VPS36-207ENST00000611132 PPP3CAQ08209 521 aa15.26■□□□□ 0.03
VPS36-207ENST00000611132 PRKG1Q13976 671 aa15.26■□□□□ 0.03
VPS36-207ENST00000611132 SLFN11Q7Z7L1 901 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms