RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 APOA5Q6Q788 366 aa5.88□□□□□ -1.47
USP8-218ENST00000561330 PCSK4Q6UW60 755 aa5.88□□□□□ -1.47
USP8-218ENST00000561330 TSHZ1Q6ZSZ6 1077 aa5.88□□□□□ -1.47
USP8-218ENST00000561330 SLC15A4Q8N697 577 aa5.88□□□□□ -1.47
USP8-218ENST00000561330 DNAJC5GQ8N7S2 189 aa5.88□□□□□ -1.47
USP8-218ENST00000561330 LRTOMTQ8WZ04 291 aa5.88□□□□□ -1.47
USP8-218ENST00000561330 SUCLG2Q96I99 432 aa5.88□□□□□ -1.47
USP8-218ENST00000561330 PGBD1Q96JS3 809 aa5.88□□□□□ -1.47
USP8-218ENST00000561330 C8orf48Q96LL4 319 aa5.88□□□□□ -1.47
USP8-218ENST00000561330 TPSD1Q9BZJ3 242 aa5.88□□□□□ -1.47
USP8-218ENST00000561330 LRIT1Q9P2V4 623 aa5.88□□□□□ -1.47
USP8-218ENST00000561330 XPR1Q9UBH6 696 aa5.88□□□□□ -1.47
USP8-218ENST00000561330 ISM1B1AKI9 464 aa5.87□□□□□ -1.47
USP8-218ENST00000561330 MYO1FO00160 1098 aa5.87□□□□□ -1.47
USP8-218ENST00000561330 KIF3BO15066 747 aa5.87□□□□□ -1.47
USP8-218ENST00000561330 DCLK1O15075 740 aa5.87□□□□□ -1.47
USP8-218ENST00000561330 MGEA5O60502 916 aa5.87□□□□□ -1.47
USP8-218ENST00000561330 CYP2C9P11712 490 aa5.87□□□□□ -1.47
USP8-218ENST00000561330 XRCC6P12956 609 aaKnown RBP eCLIP5.87□□□□□ -1.47
USP8-218ENST00000561330 PXNP49023 591 aaPredicted RBP5.87□□□□□ -1.47
USP8-218ENST00000561330 HNRNPMP52272 730 aaKnown RBP eCLIP5.87□□□□□ -1.47
USP8-218ENST00000561330 ZNF134P52741 427 aa5.87□□□□□ -1.47
USP8-218ENST00000561330 SUMO3P55854 103 aaPredicted RBP5.87□□□□□ -1.47
USP8-218ENST00000561330 LOXL3P58215 753 aa5.87□□□□□ -1.47
USP8-218ENST00000561330 SATB1Q01826 763 aa5.87□□□□□ -1.47
USP8-218ENST00000561330 SLC13A2Q13183 592 aa5.87□□□□□ -1.47
USP8-218ENST00000561330 CTBP1Q13363 440 aa5.87□□□□□ -1.47
USP8-218ENST00000561330 RAB32Q13637 225 aa5.87□□□□□ -1.47
USP8-218ENST00000561330 POLD3Q15054 466 aaPredicted RBP5.87□□□□□ -1.47
USP8-218ENST00000561330 ERCC6LQ2NKX8 1250 aa5.87□□□□□ -1.47
USP8-218ENST00000561330 GPR150Q8NGU9 434 aa5.87□□□□□ -1.47
USP8-218ENST00000561330 MYCBPAPQ8TBZ2 947 aa5.87□□□□□ -1.47
USP8-218ENST00000561330 ACTRT2Q8TDY3 377 aa5.87□□□□□ -1.47
USP8-218ENST00000561330 NELL2Q99435 816 aa5.87□□□□□ -1.47
USP8-218ENST00000561330 AGAP2Q99490 1192 aa5.87□□□□□ -1.47
USP8-218ENST00000561330 ACTRT3Q9BYD9 372 aa5.87□□□□□ -1.47
USP8-218ENST00000561330 DPH1Q9BZG8 443 aa5.87□□□□□ -1.47
USP8-218ENST00000561330 AMBRA1Q9C0C7 1298 aa5.87□□□□□ -1.47
USP8-218ENST00000561330 USP19O94966 1318 aa5.87□□□□□ -1.47
USP8-218ENST00000561330 SALL3Q9BXA9 1300 aa5.86□□□□□ -1.47
USP8-218ENST00000561330 A0A087WWL8 130 aa5.86□□□□□ -1.47
USP8-218ENST00000561330 TBX3O15119 743 aa5.86□□□□□ -1.47
USP8-218ENST00000561330 BRAFP15056 766 aa5.86□□□□□ -1.47
USP8-218ENST00000561330 RHCEP18577 417 aa5.86□□□□□ -1.47
USP8-218ENST00000561330 CXCR5P32302 372 aa5.86□□□□□ -1.47
USP8-218ENST00000561330 PLA2G5P39877 138 aa5.86□□□□□ -1.47
USP8-218ENST00000561330 PURAQ00577 322 aaKnown RBP5.86□□□□□ -1.47
USP8-218ENST00000561330 RHDQ02161 417 aa5.86□□□□□ -1.47
USP8-218ENST00000561330 PTPRRQ15256 657 aa5.86□□□□□ -1.47
USP8-218ENST00000561330 CNGA2Q16280 664 aa5.86□□□□□ -1.47
USP8-218ENST00000561330 NBPF8Q3BBV2 869 aa5.86□□□□□ -1.47
USP8-218ENST00000561330 SLC44A4Q53GD3 710 aa5.86□□□□□ -1.47
USP8-218ENST00000561330 KAZNQ674X7 775 aa5.86□□□□□ -1.47
USP8-218ENST00000561330 SFRP4Q6FHJ7 346 aaPredicted RBP5.86□□□□□ -1.47
USP8-218ENST00000561330 MPP5Q8N3R9 675 aa5.86□□□□□ -1.47
USP8-218ENST00000561330 TTC17Q96AE7 1141 aa5.86□□□□□ -1.47
USP8-218ENST00000561330 FAM136AQ96C01 138 aa5.86□□□□□ -1.47
USP8-218ENST00000561330 TIFAQ96CG3 184 aa5.86□□□□□ -1.47
USP8-218ENST00000561330 CCDC136Q96JN2 1154 aa5.86□□□□□ -1.47
USP8-218ENST00000561330 ZNF518BQ9C0D4 1074 aa5.86□□□□□ -1.47
USP8-218ENST00000561330 LRRC27Q9C0I9 530 aa5.86□□□□□ -1.47
USP8-218ENST00000561330 BHMT2Q9H2M3 363 aa5.86□□□□□ -1.47
USP8-218ENST00000561330 SHOC2Q9UQ13 582 aa5.86□□□□□ -1.47
USP8-218ENST00000561330 PAXBP1Q9Y5B6 917 aa5.86□□□□□ -1.47
USP8-218ENST00000561330 MPPED1O15442 326 aa5.85□□□□□ -1.47
USP8-218ENST00000561330 CHRM2P08172 466 aa5.85□□□□□ -1.47
USP8-218ENST00000561330 PEX2P28328 305 aa5.85□□□□□ -1.47
USP8-218ENST00000561330 WNT3P56703 355 aa5.85□□□□□ -1.47
USP8-218ENST00000561330 LILRA4P59901 499 aa5.85□□□□□ -1.47
USP8-218ENST00000561330 GALEQ14376 348 aa5.85□□□□□ -1.47
USP8-218ENST00000561330 ZNF169Q14929 603 aaPredicted RBP5.85□□□□□ -1.47
USP8-218ENST00000561330 VPS53Q5VIR6 699 aa5.85□□□□□ -1.47
USP8-218ENST00000561330 ICE2Q659A1 982 aa5.85□□□□□ -1.47
USP8-218ENST00000561330 KIAA0895LQ68EN5 471 aa5.85□□□□□ -1.47
USP8-218ENST00000561330 CYB5RLQ6IPT4 315 aa5.85□□□□□ -1.47
USP8-218ENST00000561330 OLFML1Q6UWY5 402 aa5.85□□□□□ -1.47
USP8-218ENST00000561330 FAM109AQ8N4B1 249 aa5.85□□□□□ -1.47
USP8-218ENST00000561330 TFAP2BQ92481 460 aa5.85□□□□□ -1.47
USP8-218ENST00000561330 APIPQ96GX9 242 aa5.85□□□□□ -1.47
USP8-218ENST00000561330 PTDSS2Q9BVG9 487 aa5.85□□□□□ -1.47
USP8-218ENST00000561330 MS4A7Q9GZW8 240 aaPredicted RBP5.85□□□□□ -1.47
USP8-218ENST00000561330 SMURF2Q9HAU4 748 aa5.85□□□□□ -1.47
USP8-218ENST00000561330 KIAA1586Q9HCI6 787 aa5.85□□□□□ -1.47
USP8-218ENST00000561330 KLC4Q9NSK0 619 aa5.85□□□□□ -1.47
USP8-218ENST00000561330 CPNE7Q9UBL6 633 aa5.85□□□□□ -1.47
USP8-218ENST00000561330 OGDHLQ9ULD0 1010 aa5.85□□□□□ -1.47
USP8-218ENST00000561330 CCDC151A5D8V7 595 aa5.84□□□□□ -1.47
USP8-218ENST00000561330 ORC4O43929 436 aa5.84□□□□□ -1.47
USP8-218ENST00000561330 MAP4K4O95819 1239 aaPredicted RBP5.84□□□□□ -1.47
USP8-218ENST00000561330 LMNAP02545 664 aaKnown RBP5.84□□□□□ -1.47
USP8-218ENST00000561330 HMGB1P09429 215 aaKnown RBP5.84□□□□□ -1.47
USP8-218ENST00000561330 MYF5P13349 255 aa5.84□□□□□ -1.47
USP8-218ENST00000561330 TYRP1P17643 537 aa5.84□□□□□ -1.47
USP8-218ENST00000561330 HSP90AB2PQ58FF8 381 aa5.84□□□□□ -1.47
USP8-218ENST00000561330 ARHGAP40Q5TG30 622 aa5.84□□□□□ -1.47
USP8-218ENST00000561330 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.84□□□□□ -1.47
USP8-218ENST00000561330 FKBP10Q96AY3 582 aa5.84□□□□□ -1.47
USP8-218ENST00000561330 ZNF287Q9HBT7 754 aa5.84□□□□□ -1.47
USP8-218ENST00000561330 A1CFQ9NQ94 594 aaKnown RBP5.84□□□□□ -1.47
USP8-218ENST00000561330 SACM1LQ9NTJ5 587 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms