RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 CD2APQ9Y5K6 639 aa1.21□□□□□ -2.22
COPB1-212ENST00000534771 KAT6AQ92794 2004 aa1.21□□□□□ -2.22
COPB1-212ENST00000534771 C4orf47A7E2U8 309 aa1.2□□□□□ -2.22
COPB1-212ENST00000534771 UBE2Q2LH0YL09 131 aa1.2□□□□□ -2.22
COPB1-212ENST00000534771 H7C1Q1 480 aa1.2□□□□□ -2.22
COPB1-212ENST00000534771 ADAM10O14672 748 aa1.2□□□□□ -2.22
COPB1-212ENST00000534771 PPM1DO15297 605 aa1.2□□□□□ -2.22
COPB1-212ENST00000534771 ANXA1P04083 346 aa1.2□□□□□ -2.22
COPB1-212ENST00000534771 PDHA1P08559 390 aa1.2□□□□□ -2.22
COPB1-212ENST00000534771 CHRM5P08912 532 aaPredicted RBP1.2□□□□□ -2.22
COPB1-212ENST00000534771 NPSP0C0P6 89 aa1.2□□□□□ -2.22
COPB1-212ENST00000534771 PSG1P11464 419 aa1.2□□□□□ -2.22
COPB1-212ENST00000534771 CYP2A6P11509 494 aaPredicted RBP1.2□□□□□ -2.22
COPB1-212ENST00000534771 ENGP17813 658 aa1.2□□□□□ -2.22
COPB1-212ENST00000534771 ITGALP20701 1170 aa1.2□□□□□ -2.22
COPB1-212ENST00000534771 LPOP22079 712 aaPredicted RBP1.2□□□□□ -2.22
COPB1-212ENST00000534771 HOXD9P28356 352 aaPredicted RBP1.2□□□□□ -2.22
COPB1-212ENST00000534771 PCSK6P29122 969 aa1.2□□□□□ -2.22
COPB1-212ENST00000534771 CD6P30203 668 aa1.2□□□□□ -2.22
COPB1-212ENST00000534771 ME1P48163 572 aa1.2□□□□□ -2.22
COPB1-212ENST00000534771 CYP4F2P78329 520 aa1.2□□□□□ -2.22
COPB1-212ENST00000534771 FAPQ12884 760 aa1.2□□□□□ -2.22
COPB1-212ENST00000534771 FLYWCH1Q4VC44 716 aa1.2□□□□□ -2.22
COPB1-212ENST00000534771 TREML2Q5T2D2 321 aa1.2□□□□□ -2.22
COPB1-212ENST00000534771 DAB2IPQ5VWQ8 1189 aa1.2□□□□□ -2.22
COPB1-212ENST00000534771 SFRP4Q6FHJ7 346 aaPredicted RBP1.2□□□□□ -2.22
COPB1-212ENST00000534771 GSG1LQ6UXU4 331 aa1.2□□□□□ -2.22
COPB1-212ENST00000534771 ZNF813Q6ZN06 617 aa1.2□□□□□ -2.22
COPB1-212ENST00000534771 ZNF365Q70YC5 407 aa1.2□□□□□ -2.22
COPB1-212ENST00000534771 TMPRSS12Q86WS5 348 aa1.2□□□□□ -2.22
COPB1-212ENST00000534771 PDSS2Q86YH6 399 aa1.2□□□□□ -2.22
COPB1-212ENST00000534771 ABCF1Q8NE71 845 aaKnown RBP eCLIP1.2□□□□□ -2.22
COPB1-212ENST00000534771 RP9Q8TA86 221 aaKnown RBP1.2□□□□□ -2.22
COPB1-212ENST00000534771 DNASE2BQ8WZ79 361 aa1.2□□□□□ -2.22
COPB1-212ENST00000534771 NR4A3Q92570 626 aa1.2□□□□□ -2.22
COPB1-212ENST00000534771 SCAMP4Q969E2 229 aa1.2□□□□□ -2.22
COPB1-212ENST00000534771 DAZAP1Q96EP5 407 aaKnown RBP1.2□□□□□ -2.22
COPB1-212ENST00000534771 TMX3Q96JJ7 454 aa1.2□□□□□ -2.22
COPB1-212ENST00000534771 ZC3H10Q96K80 434 aaKnown RBP1.2□□□□□ -2.22
COPB1-212ENST00000534771 PUS7Q96PZ0 661 aaKnown RBP1.2□□□□□ -2.22
COPB1-212ENST00000534771 TTC1Q99614 292 aa1.2□□□□□ -2.22
COPB1-212ENST00000534771 SMOC2Q9H3U7 446 aa1.2□□□□□ -2.22
COPB1-212ENST00000534771 IFT22Q9H7X7 185 aa1.2□□□□□ -2.22
COPB1-212ENST00000534771 SERHLQ9NQF3 203 aa1.2□□□□□ -2.22
COPB1-212ENST00000534771 TRMT13Q9NUP7 481 aaKnown RBP1.2□□□□□ -2.22
COPB1-212ENST00000534771 TDP1Q9NUW8 608 aa1.2□□□□□ -2.22
COPB1-212ENST00000534771 DNAJC28Q9NX36 388 aa1.2□□□□□ -2.22
COPB1-212ENST00000534771 INTUQ9ULD6 942 aa1.2□□□□□ -2.22
COPB1-212ENST00000534771 NOTCH4Q99466 2003 aa1.2□□□□□ -2.22
COPB1-212ENST00000534771 PRSS47A8MTI9 375 aa1.19□□□□□ -2.22
COPB1-212ENST00000534771 B4DGG1 531 aa1.19□□□□□ -2.22
COPB1-212ENST00000534771 E9PLN8 166 aa1.19□□□□□ -2.22
COPB1-212ENST00000534771 SLC16A3O15427 465 aaKnown RBP1.19□□□□□ -2.22
COPB1-212ENST00000534771 SLC28A2O43868 658 aa1.19□□□□□ -2.22
COPB1-212ENST00000534771 TLR5O60602 858 aa1.19□□□□□ -2.22
COPB1-212ENST00000534771 TLR2O60603 784 aa1.19□□□□□ -2.22
COPB1-212ENST00000534771 EXOC3O60645 756 aa1.19□□□□□ -2.22
COPB1-212ENST00000534771 A1BGP04217 495 aa1.19□□□□□ -2.22
COPB1-212ENST00000534771 IL6RP08887 468 aaPredicted RBP1.19□□□□□ -2.22
COPB1-212ENST00000534771 BPIP17213 487 aa1.19□□□□□ -2.22
COPB1-212ENST00000534771 LIPAP38571 399 aa1.19□□□□□ -2.22
COPB1-212ENST00000534771 GPR3P46089 330 aa1.19□□□□□ -2.22
COPB1-212ENST00000534771 ID4P47928 161 aa1.19□□□□□ -2.22
COPB1-212ENST00000534771 ZNF280AP59817 542 aaPredicted RBP1.19□□□□□ -2.22
COPB1-212ENST00000534771 CDC42EP1Q00587 391 aa1.19□□□□□ -2.22
COPB1-212ENST00000534771 SRSF2Q01130 221 aaKnown RBP1.19□□□□□ -2.22
COPB1-212ENST00000534771 ZNF91Q05481 1191 aa1.19□□□□□ -2.22
COPB1-212ENST00000534771 HABP2Q14520 560 aaPredicted RBP1.19□□□□□ -2.22
COPB1-212ENST00000534771 ZNF268Q14587 947 aaPredicted RBP1.19□□□□□ -2.22
COPB1-212ENST00000534771 BMS1Q14692 1282 aaKnown RBP1.19□□□□□ -2.22
COPB1-212ENST00000534771 DHCR24Q15392 516 aa1.19□□□□□ -2.22
COPB1-212ENST00000534771 ZNF585BQ52M93 769 aa1.19□□□□□ -2.22
COPB1-212ENST00000534771 DALRD3Q5D0E6 543 aaKnown RBP1.19□□□□□ -2.22
COPB1-212ENST00000534771 VPS53Q5VIR6 699 aa1.19□□□□□ -2.22
COPB1-212ENST00000534771 ICE2Q659A1 982 aa1.19□□□□□ -2.22
COPB1-212ENST00000534771 FCRL6Q6DN72 434 aa1.19□□□□□ -2.22
COPB1-212ENST00000534771 TAF2Q6P1X5 1199 aa1.19□□□□□ -2.22
COPB1-212ENST00000534771 ZNF549Q6P9A3 640 aa1.19□□□□□ -2.22
COPB1-212ENST00000534771 MTHFD1LQ6UB35 978 aa1.19□□□□□ -2.22
COPB1-212ENST00000534771 SERPINA13PQ6UXR4 307 aa1.19□□□□□ -2.22
COPB1-212ENST00000534771 COLCA1Q6ZS62 124 aa1.19□□□□□ -2.22
COPB1-212ENST00000534771 C16orf86Q6ZW13 317 aa1.19□□□□□ -2.22
COPB1-212ENST00000534771 DDX46Q7L014 1031 aaKnown RBP1.19□□□□□ -2.22
COPB1-212ENST00000534771 MAVSQ7Z434 540 aa1.19□□□□□ -2.22
COPB1-212ENST00000534771 RNF180Q86T96 592 aa1.19□□□□□ -2.22
COPB1-212ENST00000534771 HOMER1Q86YM7 354 aa1.19□□□□□ -2.22
COPB1-212ENST00000534771 RFX6Q8HWS3 928 aa1.19□□□□□ -2.22
COPB1-212ENST00000534771 FOXP4Q8IVH2 680 aaPredicted RBP1.19□□□□□ -2.22
COPB1-212ENST00000534771 FAM109AQ8N4B1 249 aa1.19□□□□□ -2.22
COPB1-212ENST00000534771 LRRC71Q8N4P6 559 aa1.19□□□□□ -2.22
COPB1-212ENST00000534771 PPM1NQ8N819 430 aa1.19□□□□□ -2.22
COPB1-212ENST00000534771 TERB1Q8NA31 727 aa1.19□□□□□ -2.22
COPB1-212ENST00000534771 PSD4Q8NDX1 1056 aa1.19□□□□□ -2.22
COPB1-212ENST00000534771 ABHD11Q8NFV4 315 aa1.19□□□□□ -2.22
COPB1-212ENST00000534771 ADAMTS18Q8TE60 1221 aa1.19□□□□□ -2.22
COPB1-212ENST00000534771 APPBP2Q92624 585 aa1.19□□□□□ -2.22
COPB1-212ENST00000534771 CCDC17Q96LX7 622 aa1.19□□□□□ -2.22
COPB1-212ENST00000534771 SIGLEC11Q96RL6 698 aa1.19□□□□□ -2.22
COPB1-212ENST00000534771 MACROD1Q9BQ69 325 aa1.19□□□□□ -2.22
COPB1-212ENST00000534771 VKORC1Q9BQB6 163 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms