RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 CGRRF1Q99675 332 aa9.69□□□□□ -0.86
USF1-204ENST00000472217 ACBD6Q9BR61 282 aa9.69□□□□□ -0.86
USF1-204ENST00000472217 PI4K2AQ9BTU6 479 aa9.69□□□□□ -0.86
USF1-204ENST00000472217 GZF1Q9H116 711 aaPredicted RBP9.69□□□□□ -0.86
USF1-204ENST00000472217 IL21Q9HBE4 155 aa9.69□□□□□ -0.86
USF1-204ENST00000472217 TRPV5Q9NQA5 729 aa9.69□□□□□ -0.86
USF1-204ENST00000472217 OBSL1O75147 1896 aa9.68□□□□□ -0.86
USF1-204ENST00000472217 A0A1B0GVL5 298 aa9.68□□□□□ -0.86
USF1-204ENST00000472217 ARNTLO00327 626 aa9.68□□□□□ -0.86
USF1-204ENST00000472217 ZNF263O14978 683 aa9.68□□□□□ -0.86
USF1-204ENST00000472217 PRPF40AO75400 957 aaKnown RBP9.68□□□□□ -0.86
USF1-204ENST00000472217 PRAMEF12O95522 483 aa9.68□□□□□ -0.86
USF1-204ENST00000472217 DLATP10515 647 aaKnown RBP9.68□□□□□ -0.86
USF1-204ENST00000472217 HMGA1P17096 107 aaKnown RBP9.68□□□□□ -0.86
USF1-204ENST00000472217 TNNI1P19237 187 aa9.68□□□□□ -0.86
USF1-204ENST00000472217 CMA1P23946 247 aa9.68□□□□□ -0.86
USF1-204ENST00000472217 CDC25CP30307 473 aa9.68□□□□□ -0.86
USF1-204ENST00000472217 SNRPFP62306 86 aaKnown RBP9.68□□□□□ -0.86
USF1-204ENST00000472217 KRT85P78386 507 aa9.68□□□□□ -0.86
USF1-204ENST00000472217 CYP24A1Q07973 514 aa9.68□□□□□ -0.86
USF1-204ENST00000472217 FCHO2Q0JRZ9 810 aa9.68□□□□□ -0.86
USF1-204ENST00000472217 PSMD6Q15008 389 aa9.68□□□□□ -0.86
USF1-204ENST00000472217 TAF12Q16514 161 aa9.68□□□□□ -0.86
USF1-204ENST00000472217 KNOP1Q1ED39 458 aaKnown RBP9.68□□□□□ -0.86
USF1-204ENST00000472217 SDHAF4Q5VUM1 108 aa9.68□□□□□ -0.86
USF1-204ENST00000472217 DPH6Q7L8W6 267 aa9.68□□□□□ -0.86
USF1-204ENST00000472217 LIMS2Q7Z4I7 341 aa9.68□□□□□ -0.86
USF1-204ENST00000472217 TMEM150AQ86TG1 271 aa9.68□□□□□ -0.86
USF1-204ENST00000472217 C12orf56Q8IXR9 622 aa9.68□□□□□ -0.86
USF1-204ENST00000472217 MAML2Q8IZL2 1156 aaPredicted RBP9.68□□□□□ -0.86
USF1-204ENST00000472217 KIAA0895Q8NCT3 520 aa9.68□□□□□ -0.86
USF1-204ENST00000472217 KBTBD7Q8WVZ9 684 aa9.68□□□□□ -0.86
USF1-204ENST00000472217 NKD2Q969F2 451 aaPredicted RBP9.68□□□□□ -0.86
USF1-204ENST00000472217 CCDC127Q96BQ5 260 aa9.68□□□□□ -0.86
USF1-204ENST00000472217 LRRC3BQ96PB8 259 aa9.68□□□□□ -0.86
USF1-204ENST00000472217 GCNAQ96QF7 691 aa9.68□□□□□ -0.86
USF1-204ENST00000472217 FNBP1Q96RU3 617 aa9.68□□□□□ -0.86
USF1-204ENST00000472217 NELL2Q99435 816 aa9.68□□□□□ -0.86
USF1-204ENST00000472217 BCO2Q9BYV7 579 aa9.68□□□□□ -0.86
USF1-204ENST00000472217 TASP1Q9H6P5 420 aa9.68□□□□□ -0.86
USF1-204ENST00000472217 ABCB6Q9NP58 842 aa9.68□□□□□ -0.86
USF1-204ENST00000472217 EXOC1Q9NV70 894 aa9.68□□□□□ -0.86
USF1-204ENST00000472217 CGNQ9P2M7 1197 aaKnown RBP9.68□□□□□ -0.86
USF1-204ENST00000472217 GTF3C4Q9UKN8 822 aa9.68□□□□□ -0.86
USF1-204ENST00000472217 NDRG2Q9UN36 371 aaKnown RBP9.68□□□□□ -0.86
USF1-204ENST00000472217 HPSEQ9Y251 543 aa9.68□□□□□ -0.86
USF1-204ENST00000472217 MRPS17Q9Y2R5 130 aaKnown RBP9.68□□□□□ -0.86
USF1-204ENST00000472217 R3HCC1Q9Y3T6 440 aaKnown RBP9.68□□□□□ -0.86
USF1-204ENST00000472217 PIAS3Q9Y6X2 628 aa9.68□□□□□ -0.86
USF1-204ENST00000472217 R4GN57 208 aa9.68□□□□□ -0.86
USF1-204ENST00000472217 KIF26AQ9ULI4 1882 aaPredicted RBP9.68□□□□□ -0.86
USF1-204ENST00000472217 MYBPHLA2RUH7 354 aa9.67□□□□□ -0.86
USF1-204ENST00000472217 MAN2B1O00754 1011 aa9.67□□□□□ -0.86
USF1-204ENST00000472217 DPYSL4O14531 572 aa9.67□□□□□ -0.86
USF1-204ENST00000472217 CHADO15335 359 aa9.67□□□□□ -0.86
USF1-204ENST00000472217 ATP2C2O75185 946 aa9.67□□□□□ -0.86
USF1-204ENST00000472217 CST3P01034 146 aaPredicted RBP9.67□□□□□ -0.86
USF1-204ENST00000472217 F11P03951 625 aa9.67□□□□□ -0.86
USF1-204ENST00000472217 SP9P0CG40 484 aa9.67□□□□□ -0.86
USF1-204ENST00000472217 CSH1P0DML2 217 aa9.67□□□□□ -0.86
USF1-204ENST00000472217 CSH2P0DML3 217 aa9.67□□□□□ -0.86
USF1-204ENST00000472217 CYP2F1P24903 491 aa9.67□□□□□ -0.86
USF1-204ENST00000472217 LMO2P25791 158 aa9.67□□□□□ -0.86
USF1-204ENST00000472217 PCSK1P29120 753 aa9.67□□□□□ -0.86
USF1-204ENST00000472217 RPS9P46781 194 aaKnown RBP9.67□□□□□ -0.86
USF1-204ENST00000472217 LHX1P48742 406 aa9.67□□□□□ -0.86
USF1-204ENST00000472217 NLRP12P59046 1061 aa9.67□□□□□ -0.86
USF1-204ENST00000472217 PSMC1P62191 440 aaKnown RBP9.67□□□□□ -0.86
USF1-204ENST00000472217 RPL10AP62906 217 aaKnown RBP9.67□□□□□ -0.86
USF1-204ENST00000472217 STK4Q13043 487 aa9.67□□□□□ -0.86
USF1-204ENST00000472217 FZD5Q13467 585 aa9.67□□□□□ -0.86
USF1-204ENST00000472217 DDR2Q16832 855 aa9.67□□□□□ -0.86
USF1-204ENST00000472217 KMT5BQ4FZB7 885 aa9.67□□□□□ -0.86
USF1-204ENST00000472217 CFAP221Q4G0U5 840 aa9.67□□□□□ -0.86
USF1-204ENST00000472217 SPATA2LQ8IUW3 424 aaPredicted RBP9.67□□□□□ -0.86
USF1-204ENST00000472217 YAF2Q8IY57 180 aa9.67□□□□□ -0.86
USF1-204ENST00000472217 ZNF687Q8N1G0 1237 aa9.67□□□□□ -0.86
USF1-204ENST00000472217 PLEKHO2Q8TD55 490 aa9.67□□□□□ -0.86
USF1-204ENST00000472217 ZNF516Q92618 1163 aa9.67□□□□□ -0.86
USF1-204ENST00000472217 CLDN23Q96B33 292 aa9.67□□□□□ -0.86
USF1-204ENST00000472217 SYT15Q9BQS2 421 aa9.67□□□□□ -0.86
USF1-204ENST00000472217 SLC46A2Q9BY10 475 aa9.67□□□□□ -0.86
USF1-204ENST00000472217 SMG9Q9H0W8 520 aaKnown RBP9.67□□□□□ -0.86
USF1-204ENST00000472217 CRTAC1Q9NQ79 661 aa9.67□□□□□ -0.86
USF1-204ENST00000472217 SPATA6Q9NWH7 488 aaPredicted RBP9.67□□□□□ -0.86
USF1-204ENST00000472217 USP25Q9UHP3 1055 aa9.67□□□□□ -0.86
USF1-204ENST00000472217 MAGED2Q9UNF1 606 aaPredicted RBP9.67□□□□□ -0.86
USF1-204ENST00000472217 CACNA1HO95180 2353 aa9.67□□□□□ -0.86
USF1-204ENST00000472217 DENND4CQ5VZ89 1909 aa9.66□□□□□ -0.86
USF1-204ENST00000472217 SLC38A8A6NNN8 435 aa9.66□□□□□ -0.86
USF1-204ENST00000472217 NCAM2O15394 837 aa9.66□□□□□ -0.86
USF1-204ENST00000472217 LAMTOR5O43504 91 aa9.66□□□□□ -0.86
USF1-204ENST00000472217 EXOC3O60645 756 aa9.66□□□□□ -0.86
USF1-204ENST00000472217 TADA3O75528 432 aa9.66□□□□□ -0.86
USF1-204ENST00000472217 NOL4O94818 638 aa9.66□□□□□ -0.86
USF1-204ENST00000472217 PRR29P0C7W0 189 aa9.66□□□□□ -0.86
USF1-204ENST00000472217 WARSP23381 471 aaKnown RBP9.66□□□□□ -0.86
USF1-204ENST00000472217 WEE1P30291 646 aa9.66□□□□□ -0.86
USF1-204ENST00000472217 MAGEA9P43362 315 aa9.66□□□□□ -0.86
USF1-204ENST00000472217 SYKP43405 635 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms