RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 SEPT1Q8WYJ6 367 aa9□□□□□ -0.97
TDP1-201ENST00000335725 TRIM47Q96LD4 638 aa9□□□□□ -0.97
TDP1-201ENST00000335725 FAM227BQ96M60 508 aa9□□□□□ -0.97
TDP1-201ENST00000335725 LBHD1Q9BQE6 289 aaPredicted RBP9□□□□□ -0.97
TDP1-201ENST00000335725 AGXT2Q9BYV1 514 aa9□□□□□ -0.97
TDP1-201ENST00000335725 UCKL1Q9NWZ5 548 aa9□□□□□ -0.97
TDP1-201ENST00000335725 KLRF2D3W0D1 207 aa8.99□□□□□ -0.97
TDP1-201ENST00000335725 KRIT1O00522 736 aa8.99□□□□□ -0.97
TDP1-201ENST00000335725 NUAK1O60285 661 aa8.99□□□□□ -0.97
TDP1-201ENST00000335725 FGAP02671 866 aa8.99□□□□□ -0.97
TDP1-201ENST00000335725 UBTFL1P0CB47 393 aaPredicted RBP8.99□□□□□ -0.97
TDP1-201ENST00000335725 BRAFP15056 766 aa8.99□□□□□ -0.97
TDP1-201ENST00000335725 PDIA3P30101 505 aaKnown RBP8.99□□□□□ -0.97
TDP1-201ENST00000335725 HNRNPH3P31942 346 aaKnown RBP8.99□□□□□ -0.97
TDP1-201ENST00000335725 FDFT1P37268 417 aa8.99□□□□□ -0.97
TDP1-201ENST00000335725 AQP4P55087 323 aa8.99□□□□□ -0.97
TDP1-201ENST00000335725 ITGADQ13349 1161 aa8.99□□□□□ -0.97
TDP1-201ENST00000335725 LSM12Q3MHD2 195 aaKnown RBP8.99□□□□□ -0.97
TDP1-201ENST00000335725 C5orf22Q49AR2 442 aa8.99□□□□□ -0.97
TDP1-201ENST00000335725 DNAL1Q4LDG9 190 aa8.99□□□□□ -0.97
TDP1-201ENST00000335725 EFCAB2Q5VUJ9 269 aa8.99□□□□□ -0.97
TDP1-201ENST00000335725 FCRLBQ6BAA4 426 aa8.99□□□□□ -0.97
TDP1-201ENST00000335725 ALKBH2Q6NS38 261 aa8.99□□□□□ -0.97
TDP1-201ENST00000335725 TMPRSS6Q8IU80 811 aa8.99□□□□□ -0.97
TDP1-201ENST00000335725 ASCC1Q8N9N2 400 aaKnown RBP8.99□□□□□ -0.97
TDP1-201ENST00000335725 CATSPER1Q8NEC5 780 aa8.99□□□□□ -0.97
TDP1-201ENST00000335725 SLC7A3Q8WY07 619 aa8.99□□□□□ -0.97
TDP1-201ENST00000335725 TSEN34Q9BSV6 310 aaKnown RBP8.99□□□□□ -0.97
TDP1-201ENST00000335725 MKRN2Q9H000 416 aaKnown RBP8.99□□□□□ -0.97
TDP1-201ENST00000335725 RMND5AQ9H871 391 aa8.99□□□□□ -0.97
TDP1-201ENST00000335725 CD93Q9NPY3 652 aa8.99□□□□□ -0.97
TDP1-201ENST00000335725 AVENQ9NQS1 362 aaPredicted RBP8.99□□□□□ -0.97
TDP1-201ENST00000335725 SLC39A1Q9NY26 324 aa8.99□□□□□ -0.97
TDP1-201ENST00000335725 DIP2AQ14689 1571 aa8.99□□□□□ -0.97
TDP1-201ENST00000335725 KIAA1210Q9ULL0 1709 aa8.99□□□□□ -0.97
TDP1-201ENST00000335725 MED23Q9ULK4 1368 aa8.99□□□□□ -0.97
TDP1-201ENST00000335725 HDAC3O15379 428 aa8.99□□□□□ -0.97
TDP1-201ENST00000335725 FDPSP14324 419 aaKnown RBP8.99□□□□□ -0.97
TDP1-201ENST00000335725 CD44P16070 742 aaKnown RBP8.99□□□□□ -0.97
TDP1-201ENST00000335725 RPL9P32969 192 aaKnown RBP8.99□□□□□ -0.97
TDP1-201ENST00000335725 CIITAP33076 1130 aa8.99□□□□□ -0.97
TDP1-201ENST00000335725 HNF1BP35680 557 aa8.99□□□□□ -0.97
TDP1-201ENST00000335725 SCRN3Q0VDG4 424 aa8.99□□□□□ -0.97
TDP1-201ENST00000335725 SELENBP1Q13228 472 aa8.99□□□□□ -0.97
TDP1-201ENST00000335725 TAF12Q16514 161 aa8.99□□□□□ -0.97
TDP1-201ENST00000335725 ZBTB41Q5SVQ8 909 aa8.99□□□□□ -0.97
TDP1-201ENST00000335725 RNASEH2BQ5TBB1 312 aaKnown RBP8.99□□□□□ -0.97
TDP1-201ENST00000335725 C1orf146Q5VVC0 180 aa8.99□□□□□ -0.97
TDP1-201ENST00000335725 KRT26Q7Z3Y9 468 aa8.99□□□□□ -0.97
TDP1-201ENST00000335725 AKAP14Q86UN6 197 aa8.99□□□□□ -0.97
TDP1-201ENST00000335725 CDR2LQ86X02 465 aaPredicted RBP8.99□□□□□ -0.97
TDP1-201ENST00000335725 REXO1Q8N1G1 1221 aaKnown RBP8.99□□□□□ -0.97
TDP1-201ENST00000335725 SHCBP1Q8NEM2 672 aa8.99□□□□□ -0.97
TDP1-201ENST00000335725 GDPD5Q8WTR4 605 aa8.99□□□□□ -0.97
TDP1-201ENST00000335725 VPS33AQ96AX1 596 aa8.99□□□□□ -0.97
TDP1-201ENST00000335725 PAGE5Q96GU1 130 aa8.99□□□□□ -0.97
TDP1-201ENST00000335725 HIPK3Q9H422 1215 aa8.99□□□□□ -0.97
TDP1-201ENST00000335725 NEU2Q9Y3R4 380 aa8.99□□□□□ -0.97
TDP1-201ENST00000335725 IQGAP3Q86VI3 1631 aa8.99□□□□□ -0.97
TDP1-201ENST00000335725 TYW5A2RUC4 315 aaKnown RBP8.98□□□□□ -0.97
TDP1-201ENST00000335725 LRRC72A6NJI9 287 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 TNPO2O14787 897 aaKnown RBP8.98□□□□□ -0.97
TDP1-201ENST00000335725 RNGTTO60942 597 aaKnown RBP8.98□□□□□ -0.97
TDP1-201ENST00000335725 PALMO75781 387 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 SNRPAP09012 282 aaKnown RBP8.98□□□□□ -0.97
TDP1-201ENST00000335725 SRGNP10124 158 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 RBP3P10745 1247 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 ITIH1P19827 911 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 IL10P22301 178 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 AMPD1P23109 780 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 RRM2P31350 389 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 PHKA1P46020 1223 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 SCNN1DP51172 638 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 DNA2P51530 1060 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 PLTPP55058 493 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 RNASE9P60153 205 aaKnown RBP8.98□□□□□ -0.97
TDP1-201ENST00000335725 STX3Q13277 289 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 ACAP2Q15057 778 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 LEXMQ3ZCV2 418 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 SLC9C1Q4G0N8 1177 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 ZNF704Q6ZNC4 412 aaPredicted RBP8.98□□□□□ -0.97
TDP1-201ENST00000335725 RIPOR1Q6ZS17 1223 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 OTOP3Q7RTS5 596 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 GLRX5Q86SX6 157 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 CCDC25Q86WR0 208 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 ANKRD35Q8N283 1001 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 VGLL2Q8N8G2 317 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 JADE3Q92613 823 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 TTC17Q96AE7 1141 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 SLC39A13Q96H72 371 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 FSD1Q9BTV5 496 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 ADNPQ9H2P0 1102 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 ZHX3Q9H4I2 956 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 LIN7BQ9HAP6 207 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.98□□□□□ -0.97
TDP1-201ENST00000335725 NCOA5Q9HCD5 579 aaKnown RBP8.98□□□□□ -0.97
TDP1-201ENST00000335725 ATP13A2Q9NQ11 1180 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 GDAP2Q9NXN4 497 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 SNTG2Q9NY99 539 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 GRID1Q9ULK0 1009 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms