RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 SLC25A41Q8N5S1 370 aa17.18■□□□□ 0.34
SFXN1-201ENST00000321442 CYP26B1Q9NR63 512 aa17.18■□□□□ 0.34
SFXN1-201ENST00000321442 NINJ2Q9NZG7 142 aa17.18■□□□□ 0.34
SFXN1-201ENST00000321442 MYH10P35580 1976 aa17.18■□□□□ 0.34
SFXN1-201ENST00000321442 AIM2O14862 343 aa17.17■□□□□ 0.34
SFXN1-201ENST00000321442 GJB6O95452 261 aa17.17■□□□□ 0.34
SFXN1-201ENST00000321442 PDGFRAP16234 1089 aa17.17■□□□□ 0.34
SFXN1-201ENST00000321442 SNX30Q5VWJ9 437 aa17.17■□□□□ 0.34
SFXN1-201ENST00000321442 C11orf63Q6NUN7 778 aa17.17■□□□□ 0.34
SFXN1-201ENST00000321442 EXOC3L1Q86VI1 746 aa17.17■□□□□ 0.34
SFXN1-201ENST00000321442 RIBC1Q8N443 379 aaPredicted RBP17.17■□□□□ 0.34
SFXN1-201ENST00000321442 E2F7Q96AV8 911 aa17.17■□□□□ 0.34
SFXN1-201ENST00000321442 GMCL1Q96IK5 515 aa17.17■□□□□ 0.34
SFXN1-201ENST00000321442 UBXN6Q9BZV1 441 aa17.17■□□□□ 0.34
SFXN1-201ENST00000321442 MYLK2Q9H1R3 596 aa17.17■□□□□ 0.34
SFXN1-201ENST00000321442 ARMCX1Q9P291 453 aa17.17■□□□□ 0.34
SFXN1-201ENST00000321442 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.17■□□□□ 0.34
SFXN1-201ENST00000321442 C19orf81C9J6K1 198 aa17.17■□□□□ 0.34
SFXN1-201ENST00000321442 BRD2P25440 801 aaKnown RBP17.17■□□□□ 0.34
SFXN1-201ENST00000321442 RSPH3Q86UC2 560 aa17.17■□□□□ 0.34
SFXN1-201ENST00000321442 FBXO16Q8IX29 292 aaPredicted RBP17.17■□□□□ 0.34
SFXN1-201ENST00000321442 SYTL5Q8TDW5 730 aaPredicted RBP17.17■□□□□ 0.34
SFXN1-201ENST00000321442 CLMNQ96JQ2 1002 aa17.17■□□□□ 0.34
SFXN1-201ENST00000321442 TSPYL2Q9H2G4 693 aaPredicted RBP17.17■□□□□ 0.34
SFXN1-201ENST00000321442 LRRC4Q9HBW1 653 aa17.17■□□□□ 0.34
SFXN1-201ENST00000321442 ERVK-5Q9HDB9 667 aa17.17■□□□□ 0.34
SFXN1-201ENST00000321442 PRKCIP41743 596 aa17.17■□□□□ 0.34
SFXN1-201ENST00000321442 DAB2IPQ5VWQ8 1189 aa17.17■□□□□ 0.34
SFXN1-201ENST00000321442 CCDC33Q8N5R6 958 aa17.17■□□□□ 0.34
SFXN1-201ENST00000321442 FBXO36Q8NEA4 188 aa17.17■□□□□ 0.34
SFXN1-201ENST00000321442 RBM46Q8TBY0 533 aaKnown RBP17.17■□□□□ 0.34
SFXN1-201ENST00000321442 OLFML3Q9NRN5 406 aa17.17■□□□□ 0.34
SFXN1-201ENST00000321442 P4HA2O15460 535 aa17.17■□□□□ 0.34
SFXN1-201ENST00000321442 CTSHP09668 335 aa17.17■□□□□ 0.34
SFXN1-201ENST00000321442 ZSCAN5DPP0CG00 497 aa17.17■□□□□ 0.34
SFXN1-201ENST00000321442 ENO3P13929 434 aaPredicted RBP17.17■□□□□ 0.34
SFXN1-201ENST00000321442 SERPINB3P29508 390 aa17.17■□□□□ 0.34
SFXN1-201ENST00000321442 SREBF1P36956 1147 aa17.17■□□□□ 0.34
SFXN1-201ENST00000321442 OLFM3Q96PB7 478 aa17.17■□□□□ 0.34
SFXN1-201ENST00000321442 FOXP3Q9BZS1 431 aa17.17■□□□□ 0.34
SFXN1-201ENST00000321442 XAB2Q9HCS7 855 aaKnown RBP17.17■□□□□ 0.34
SFXN1-201ENST00000321442 GTSE1Q9NYZ3 720 aa17.17■□□□□ 0.34
SFXN1-201ENST00000321442 ENTPD5O75356 428 aa17.16■□□□□ 0.34
SFXN1-201ENST00000321442 UPP2O95045 317 aa17.16■□□□□ 0.34
SFXN1-201ENST00000321442 HNRNPCP07910 306 aaKnown RBP eCLIP17.16■□□□□ 0.34
SFXN1-201ENST00000321442 KRT16P08779 473 aa17.16■□□□□ 0.34
SFXN1-201ENST00000321442 POU5F1BQ06416 359 aa17.16■□□□□ 0.34
SFXN1-201ENST00000321442 TTLL4Q14679 1199 aa17.16■□□□□ 0.34
SFXN1-201ENST00000321442 SPOUT1Q5T280 376 aaKnown RBP17.16■□□□□ 0.34
SFXN1-201ENST00000321442 NOP9Q86U38 636 aaKnown RBP17.16■□□□□ 0.34
SFXN1-201ENST00000321442 HIC2Q96JB3 615 aa17.16■□□□□ 0.34
SFXN1-201ENST00000321442 KCND2Q9NZV8 630 aa17.16■□□□□ 0.34
SFXN1-201ENST00000321442 TNPO2O14787 897 aaKnown RBP17.16■□□□□ 0.34
SFXN1-201ENST00000321442 DLG4P78352 724 aa17.16■□□□□ 0.34
SFXN1-201ENST00000321442 DUPD1Q68J44 220 aa17.16■□□□□ 0.34
SFXN1-201ENST00000321442 ISLR2Q6UXK2 745 aa17.16■□□□□ 0.34
SFXN1-201ENST00000321442 ARHGAP18Q8N392 663 aa17.16■□□□□ 0.34
SFXN1-201ENST00000321442 P2RX7Q99572 595 aaKnown RBP17.16■□□□□ 0.34
SFXN1-201ENST00000321442 ATP9BO43861 1147 aa17.16■□□□□ 0.34
SFXN1-201ENST00000321442 PPP1R11O60927 126 aaPredicted RBP17.16■□□□□ 0.34
SFXN1-201ENST00000321442 NOL4O94818 638 aa17.16■□□□□ 0.34
SFXN1-201ENST00000321442 APOEP02649 317 aa17.16■□□□□ 0.34
SFXN1-201ENST00000321442 SLC4A1P02730 911 aa17.16■□□□□ 0.34
SFXN1-201ENST00000321442 SNRPAP09012 282 aaKnown RBP17.16■□□□□ 0.34
SFXN1-201ENST00000321442 RRP1BQ14684 758 aaKnown RBP17.16■□□□□ 0.34
SFXN1-201ENST00000321442 ATXN2LQ8WWM7 1075 aaKnown RBP17.16■□□□□ 0.34
SFXN1-201ENST00000321442 PAFAH2Q99487 392 aa17.16■□□□□ 0.34
SFXN1-201ENST00000321442 RNF103-CHMP3A0A140T963 221 aa17.15■□□□□ 0.34
SFXN1-201ENST00000321442 IRF6O14896 467 aa17.15■□□□□ 0.34
SFXN1-201ENST00000321442 DGKIO75912 1065 aa17.15■□□□□ 0.34
SFXN1-201ENST00000321442 PECAM1P16284 738 aaPredicted RBP17.15■□□□□ 0.34
SFXN1-201ENST00000321442 SLC12A3P55017 1021 aa17.15■□□□□ 0.34
SFXN1-201ENST00000321442 OLFML2BQ68BL8 750 aa17.15■□□□□ 0.34
SFXN1-201ENST00000321442 FAM83AQ86UY5 434 aa17.15■□□□□ 0.34
SFXN1-201ENST00000321442 EIF1ADQ8N9N8 165 aaKnown RBP17.15■□□□□ 0.34
SFXN1-201ENST00000321442 ADARB2Q9NS39 739 aaKnown RBP17.15■□□□□ 0.34
SFXN1-201ENST00000321442 TBX20Q9UMR3 447 aa17.15■□□□□ 0.34
SFXN1-201ENST00000321442 BGNP21810 368 aa17.15■□□□□ 0.34
SFXN1-201ENST00000321442 YY1P25490 414 aa17.15■□□□□ 0.34
SFXN1-201ENST00000321442 CIITAP33076 1130 aa17.15■□□□□ 0.34
SFXN1-201ENST00000321442 GPC3P51654 580 aa17.15■□□□□ 0.34
SFXN1-201ENST00000321442 AP1B1Q10567 949 aa17.15■□□□□ 0.34
SFXN1-201ENST00000321442 ORC1Q13415 861 aa17.15■□□□□ 0.34
SFXN1-201ENST00000321442 DNAL1Q4LDG9 190 aa17.15■□□□□ 0.34
SFXN1-201ENST00000321442 LRRC6Q86X45 466 aa17.15■□□□□ 0.34
SFXN1-201ENST00000321442 IL31RAQ8NI17 732 aa17.15■□□□□ 0.34
SFXN1-201ENST00000321442 C10orf88Q9H8K7 445 aa17.15■□□□□ 0.34
SFXN1-201ENST00000321442 FAM208AQ9UK61 1670 aaKnown RBP17.15■□□□□ 0.34
SFXN1-201ENST00000321442 GRIN2DO15399 1336 aa17.15■□□□□ 0.34
SFXN1-201ENST00000321442 ZBBXA8MT70 800 aa17.15■□□□□ 0.34
SFXN1-201ENST00000321442 ATP9AO75110 1047 aa17.15■□□□□ 0.34
SFXN1-201ENST00000321442 SLITRK3O94933 977 aa17.15■□□□□ 0.34
SFXN1-201ENST00000321442 PTPN4P29074 926 aa17.15■□□□□ 0.34
SFXN1-201ENST00000321442 PRAMEP78395 509 aa17.15■□□□□ 0.34
SFXN1-201ENST00000321442 RNF135Q8IUD6 432 aa17.15■□□□□ 0.34
SFXN1-201ENST00000321442 OPTNQ96CV9 577 aa17.15■□□□□ 0.34
SFXN1-201ENST00000321442 UPF3AQ9H1J1 476 aaKnown RBP17.15■□□□□ 0.34
SFXN1-201ENST00000321442 A8MUI8 341 aa17.14■□□□□ 0.33
SFXN1-201ENST00000321442 DGAT1O75907 488 aa17.14■□□□□ 0.33
SFXN1-201ENST00000321442 C6orf222P0C671 652 aaPredicted RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms