RNA–Protein interactions for RNA: snR17b

snR17b, Transcript of Small nucleolar RNA (snoRNA) U3, yeast

Gene snR17b, Length 332 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR17b	snR17b	MCH2	P36032	473 aa		4.09	□□□□□ -1.75
snR17b	snR17b	YKR070W	P36151	352 aa	Known RBP	4.09	□□□□□ -1.75
snR17b	snR17b	PSD1	P39006	500 aa		4.09	□□□□□ -1.75
snR17b	snR17b	YER079W	P40052	210 aa	Known RBP	4.09	□□□□□ -1.75
snR17b	snR17b	PRM5	P40476	318 aa		4.09	□□□□□ -1.75
snR17b	snR17b	CIS3	P47001	227 aa		4.09	□□□□□ -1.75
snR17b	snR17b	YDL183C	P48569	320 aa		4.09	□□□□□ -1.75
snR17b	snR17b	YNR064C	P53750	290 aa		4.09	□□□□□ -1.75
snR17b	snR17b	YNR071C	P53757	342 aa		4.09	□□□□□ -1.75
snR17b	snR17b	ECM18	Q04623	453 aa		4.09	□□□□□ -1.75
snR17b	snR17b	YDR344C	Q05510	147 aa		4.09	□□□□□ -1.75
snR17b	snR17b	HRD1	Q08109	551 aa		4.09	□□□□□ -1.75
snR17b	snR17b	RKI1	Q12189	258 aa		4.09	□□□□□ -1.75
snR17b	snR17b	NCE102	Q12207	173 aa	RIP-Chip data	4.09	□□□□□ -1.75	not detected
snR17b	snR17b	YDL180W	Q12301	547 aa		4.09	□□□□□ -1.75
snR17b	snR17b	YLR363W-A	Q3E747	85 aa		4.09	□□□□□ -1.75
snR17b	snR17b	YMR316C-A	I2HB70	103 aa		4.08	□□□□□ -1.76
snR17b	snR17b	YLR302C	O13544	120 aa		4.08	□□□□□ -1.76
snR17b	snR17b	RPS16A	P0CX51	143 aa	Known RBP	4.08	□□□□□ -1.76
snR17b	snR17b	RPS16B	P0CX52	143 aa	Known RBP	4.08	□□□□□ -1.76
snR17b	snR17b	SAG1	P20840	650 aa		4.08	□□□□□ -1.76
snR17b	snR17b	SRX1	P36077	127 aa		4.08	□□□□□ -1.76
snR17b	snR17b	YNL200C	P40165	246 aa	Known RBP	4.08	□□□□□ -1.76
snR17b	snR17b	YNL198C	P40166	100 aa		4.08	□□□□□ -1.76
snR17b	snR17b	YFL054C	P43549	646 aa		4.08	□□□□□ -1.76
snR17b	snR17b	YGL118C	P53132	145 aa		4.08	□□□□□ -1.76
snR17b	snR17b	LCL3	P53153	274 aa		4.08	□□□□□ -1.76
snR17b	snR17b	YGR017W	P53210	297 aa		4.08	□□□□□ -1.76
snR17b	snR17b	SWT21	P53873	357 aa	Predicted RBP	4.08	□□□□□ -1.76
snR17b	snR17b	DYN2	Q02647	92 aa		4.08	□□□□□ -1.76
snR17b	snR17b	YMR210W	Q03649	449 aa		4.08	□□□□□ -1.76
snR17b	snR17b	TRS23	Q03784	219 aa		4.08	□□□□□ -1.76
snR17b	snR17b	YMR254C	Q04838	102 aa		4.08	□□□□□ -1.76
snR17b	snR17b	ARC18	Q05933	178 aa	Known RBP	4.08	□□□□□ -1.76
snR17b	snR17b	THI72	Q08579	599 aa		4.08	□□□□□ -1.76
snR17b	snR17b	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
snR17b	snR17b	FSF1	Q12029	327 aa	Known RBP	4.08	□□□□□ -1.76
snR17b	snR17b	CYC7	P00045	113 aa		4.07	□□□□□ -1.76
snR17b	snR17b	RPP2B	P02400	110 aa	Known RBP	4.07	□□□□□ -1.76
snR17b	snR17b	MRS3	P10566	314 aa		4.07	□□□□□ -1.76
snR17b	snR17b	RAD23	P32628	398 aa	Known RBP	4.07	□□□□□ -1.76
snR17b	snR17b	NNK1	P36003	928 aa		4.07	□□□□□ -1.76
snR17b	snR17b	PFS1	P38872	237 aa		4.07	□□□□□ -1.76
snR17b	snR17b	SEC72	P39742	193 aa	Known RBP	4.07	□□□□□ -1.76
snR17b	snR17b	SAS2	P40963	338 aa		4.07	□□□□□ -1.76
snR17b	snR17b	MIC27	P50945	234 aa		4.07	□□□□□ -1.76
snR17b	snR17b	SDS23	P53172	527 aa		4.07	□□□□□ -1.76
snR17b	snR17b	BRP1	P53194	125 aa		4.07	□□□□□ -1.76
snR17b	snR17b	COX18	P53239	316 aa		4.07	□□□□□ -1.76
snR17b	snR17b	PCP1	P53259	346 aa		4.07	□□□□□ -1.76
snR17b	snR17b	CAB4	P53332	305 aa		4.07	□□□□□ -1.76
snR17b	snR17b	DPP1	Q05521	289 aa		4.07	□□□□□ -1.76
snR17b	snR17b	ISU2	Q12056	156 aa		4.07	□□□□□ -1.76
snR17b	snR17b	YPS3	Q12303	508 aa		4.07	□□□□□ -1.76
snR17b	snR17b	WIP1	Q2V2P8	89 aa		4.07	□□□□□ -1.76
snR17b	snR17b	BOL1	Q3E793	110 aa		4.07	□□□□□ -1.76
snR17b	snR17b	MRS1	P07266	363 aa		4.06	□□□□□ -1.76
snR17b	snR17b	ATP10	P18496	279 aa		4.06	□□□□□ -1.76
snR17b	snR17b	ROX3	P25046	220 aa		4.06	□□□□□ -1.76
snR17b	snR17b	FEN2	P25621	512 aa	Known RBP	4.06	□□□□□ -1.76
snR17b	snR17b	YPT53	P36019	220 aa		4.06	□□□□□ -1.76
snR17b	snR17b	YKR073C	P36153	106 aa		4.06	□□□□□ -1.76
snR17b	snR17b	ECM33	P38248	429 aa	Known RBP	4.06	□□□□□ -1.76
snR17b	snR17b	YBR220C	P38318	560 aa		4.06	□□□□□ -1.76
snR17b	snR17b	YHR138C	P38841	114 aa	Predicted RBP	4.06	□□□□□ -1.76
snR17b	snR17b	HUA1	P40325	198 aa		4.06	□□□□□ -1.76
snR17b	snR17b	YIL086C	P40503	102 aa		4.06	□□□□□ -1.76
snR17b	snR17b	YIL029C	P40538	142 aa		4.06	□□□□□ -1.76
snR17b	snR17b	POP3	P53833	195 aa	Predicted RBP	4.06	□□□□□ -1.76
snR17b	snR17b	ATG4	P53867	494 aa		4.06	□□□□□ -1.76
snR17b	snR17b	SWS2	P53937	143 aa		4.06	□□□□□ -1.76
snR17b	snR17b	VPS71	Q03433	280 aa		4.06	□□□□□ -1.76
snR17b	snR17b	BET5	Q03630	159 aa		4.06	□□□□□ -1.76
snR17b	snR17b	YHP1	Q04116	353 aa		4.06	□□□□□ -1.76
snR17b	snR17b	POS5	Q06892	414 aa		4.06	□□□□□ -1.76
snR17b	snR17b	ADH1	P00330	348 aa	Known RBP	4.05	□□□□□ -1.76
snR17b	snR17b	RPL23A	P0CX41	137 aa	Known RBP	4.05	□□□□□ -1.76
snR17b	snR17b	RPL23B	P0CX42	137 aa	Known RBP	4.05	□□□□□ -1.76
snR17b	snR17b	YFL068W	P0CX99	160 aa		4.05	□□□□□ -1.76
snR17b	snR17b	YLL066W-A	P0CY00	160 aa		4.05	□□□□□ -1.76
snR17b	snR17b	YLL067W-A	P0CY01	160 aa		4.05	□□□□□ -1.76
snR17b	snR17b	REC104	P33323	182 aa		4.05	□□□□□ -1.76
snR17b	snR17b	YKL097C	P34245	136 aa		4.05	□□□□□ -1.76
snR17b	snR17b	YHR173C	P38864	112 aa		4.05	□□□□□ -1.76
snR17b	snR17b	YIL012W	P40551	113 aa		4.05	□□□□□ -1.76
snR17b	snR17b	YPS6	P40583	537 aa		4.05	□□□□□ -1.76
snR17b	snR17b	YML079W	Q03629	201 aa		4.05	□□□□□ -1.76
snR17b	snR17b	RAV2	Q03956	351 aa		4.05	□□□□□ -1.76
snR17b	snR17b	API2	Q04413	109 aa		4.05	□□□□□ -1.76
snR17b	snR17b	SCW10	Q04951	389 aa		4.05	□□□□□ -1.76
snR17b	snR17b	HPF1	Q05164	967 aa		4.05	□□□□□ -1.76
snR17b	snR17b	PIN2	Q12057	282 aa		4.05	□□□□□ -1.76
snR17b	snR17b	RPL7B	Q12213	244 aa	Known RBP	4.05	□□□□□ -1.76
snR17b	snR17b	YGL258W-A	Q3E740	77 aa		4.05	□□□□□ -1.76
snR17b	snR17b	VPS63	O13549	108 aa		4.04	□□□□□ -1.76
snR17b	snR17b	RPL12A	P0CX53	165 aa	Known RBP	4.04	□□□□□ -1.76
snR17b	snR17b	RPL12B	P0CX54	165 aa		4.04	□□□□□ -1.76
snR17b	snR17b	YHR214C-D	P0CX93	97 aa		4.04	□□□□□ -1.76
snR17b	snR17b	TIR1	P10863	254 aa		4.04	□□□□□ -1.76
snR17b	snR17b	DAL82	P21705	255 aa		4.04	□□□□□ -1.76

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