RNA–Protein interactions for RNA: snR14

snR14, Transcript of U4 spliceosomal RNA (U4 snRNA), yeast

Gene snR14, Length 160 nt, Biotype snRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR14	snR14	THO2	P53552	1597 aa	Known RBP	0.8	□□□□□ -2.28
snR14	snR14	DNF2	Q12675	1612 aa		0.8	□□□□□ -2.28
snR14	snR14	YAR023C	D6VPM8	179 aa		0.8	□□□□□ -2.28
snR14	snR14	YHR139C-A	O13536	103 aa		0.8	□□□□□ -2.28
snR14	snR14	YOR304C-A	O14468	76 aa		0.8	□□□□□ -2.28
snR14	snR14	HAP2	P06774	265 aa		0.8	□□□□□ -2.28
snR14	snR14	MRS1	P07266	363 aa		0.8	□□□□□ -2.28
snR14	snR14	PHO85	P17157	305 aa		0.8	□□□□□ -2.28
snR14	snR14	FUN14	P18411	198 aa		0.8	□□□□□ -2.28
snR14	snR14	SEC59	P20048	519 aa		0.8	□□□□□ -2.28
snR14	snR14	ATP15	P21306	62 aa		0.8	□□□□□ -2.28
snR14	snR14	IDP1	P21954	428 aa	Known RBP	0.8	□□□□□ -2.28
snR14	snR14	AHC2	P25649	128 aa		0.8	□□□□□ -2.28
snR14	snR14	ARO7	P32178	256 aa		0.8	□□□□□ -2.28
snR14	snR14	LHP1	P33399	275 aa	Known RBP	0.8	□□□□□ -2.28
snR14	snR14	SFK1	P35735	353 aa		0.8	□□□□□ -2.28
snR14	snR14	PAN3	P36102	679 aa	Predicted RBP	0.8	□□□□□ -2.28
snR14	snR14	YKR045C	P36138	183 aa		0.8	□□□□□ -2.28
snR14	snR14	YBR219C	P38317	127 aa		0.8	□□□□□ -2.28
snR14	snR14	YPT31	P38555	223 aa	Known RBP	0.8	□□□□□ -2.28
snR14	snR14	YHL042W	P38729	150 aa		0.8	□□□□□ -2.28
snR14	snR14	IPI1	P38803	334 aa	Predicted RBP	0.8	□□□□□ -2.28
snR14	snR14	IPT1	P38954	527 aa		0.8	□□□□□ -2.28
snR14	snR14	SEC72	P39742	193 aa	Known RBP	0.8	□□□□□ -2.28
snR14	snR14	YEA4	P40004	342 aa		0.8	□□□□□ -2.28
snR14	snR14	FLX1	P40464	311 aa		0.8	□□□□□ -2.28
snR14	snR14	YGR201C	P42936	225 aa		0.8	□□□□□ -2.28
snR14	snR14	SER2	P42941	309 aa		0.8	□□□□□ -2.28
snR14	snR14	SNN1	P48232	102 aa		0.8	□□□□□ -2.28
snR14	snR14	KNH1	P50112	268 aa		0.8	□□□□□ -2.28
snR14	snR14	SBH2	P52871	88 aa		0.8	□□□□□ -2.28
snR14	snR14	NQM1	P53228	333 aa	Predicted RBP	0.8	□□□□□ -2.28
snR14	snR14	YNL184C	P53876	108 aa		0.8	□□□□□ -2.28
snR14	snR14	NRK1	P53915	240 aa		0.8	□□□□□ -2.28
snR14	snR14	YDC1	Q02896	317 aa		0.8	□□□□□ -2.28
snR14	snR14	YMR099C	Q03161	297 aa	Known RBP	0.8	□□□□□ -2.28
snR14	snR14	YMR253C	Q04835	414 aa		0.8	□□□□□ -2.28
snR14	snR14	DGA1	Q08650	418 aa		0.8	□□□□□ -2.28
snR14	snR14	SCP1	Q08873	200 aa		0.8	□□□□□ -2.28
snR14	snR14	SPC3	Q12133	184 aa		0.8	□□□□□ -2.28
snR14	snR14	YLR046C	Q12253	270 aa		0.8	□□□□□ -2.28
snR14	snR14	MPD1	Q12404	318 aa	Known RBP	0.8	□□□□□ -2.28
snR14	snR14	YLR361C-A	Q3E795	98 aa		0.8	□□□□□ -2.28
snR14	snR14	PDR11	P40550	1411 aa		0.8	□□□□□ -2.28
snR14	snR14	TY3B-I	Q7LHG5	1498 aa	Known RBP	0.8	□□□□□ -2.28
snR14	snR14	HAP1	P0CE41	1502 aa		0.79	□□□□□ -2.28
snR14	snR14	QCR2	P07257	368 aa		0.79	□□□□□ -2.28
snR14	snR14	RPS28B	P0C0X0	67 aa	Known RBP	0.79	□□□□□ -2.28
snR14	snR14	MAK31	P23059	88 aa		0.79	□□□□□ -2.28
snR14	snR14	RPS1B	P23248	255 aa	Known RBP	0.79	□□□□□ -2.28
snR14	snR14	SUA7	P29055	345 aa	Predicted RBP	0.79	□□□□□ -2.28
snR14	snR14	TRR1	P29509	319 aa	Known RBP	0.79	□□□□□ -2.28
snR14	snR14	SRB6	P32570	121 aa		0.79	□□□□□ -2.28
snR14	snR14	SSS1	P35179	80 aa		0.79	□□□□□ -2.28
snR14	snR14	YRA2	P36036	203 aa	Known RBP RIP-Chip data	0.79	□□□□□ -2.28	not detected
snR14	snR14	FMP23	P38231	175 aa		0.79	□□□□□ -2.28
snR14	snR14	DER1	P38307	211 aa		0.79	□□□□□ -2.28
snR14	snR14	NSG1	P38837	291 aa		0.79	□□□□□ -2.28
snR14	snR14	HPA3	P39979	161 aa		0.79	□□□□□ -2.28
snR14	snR14	YER121W	P40076	114 aa		0.79	□□□□□ -2.28
snR14	snR14	MOB1	P40484	314 aa		0.79	□□□□□ -2.28
snR14	snR14	GLC8	P41818	229 aa		0.79	□□□□□ -2.28
snR14	snR14	NSE4	P43124	402 aa		0.79	□□□□□ -2.28
snR14	snR14	ARP3	P47117	449 aa	Known RBP	0.79	□□□□□ -2.28
snR14	snR14	RPS12	P48589	143 aa	Known RBP	0.79	□□□□□ -2.28
snR14	snR14	YGL235W	P53071	178 aa		0.79	□□□□□ -2.28
snR14	snR14	YIP3	P53633	176 aa		0.79	□□□□□ -2.28
snR14	snR14	PGA1	P53896	198 aa		0.79	□□□□□ -2.28
snR14	snR14	RPL22B	P56628	122 aa	Known RBP	0.79	□□□□□ -2.28
snR14	snR14	YDR274C	P87283	123 aa		0.79	□□□□□ -2.28
snR14	snR14	YMR007W	Q03675	126 aa		0.79	□□□□□ -2.28
snR14	snR14	TVP18	Q04767	167 aa		0.79	□□□□□ -2.28
snR14	snR14	RNH202	Q05635	350 aa		0.79	□□□□□ -2.28
snR14	snR14	FRQ1	Q06389	190 aa		0.79	□□□□□ -2.28
snR14	snR14	HRD1	Q08109	551 aa		0.79	□□□□□ -2.28
snR14	snR14	YOL024W	Q08172	172 aa		0.79	□□□□□ -2.28
snR14	snR14	GRE1	Q08969	168 aa		0.79	□□□□□ -2.28
snR14	snR14	RAD28	Q12021	506 aa		0.79	□□□□□ -2.28
snR14	snR14	YLR053C	Q12026	108 aa		0.79	□□□□□ -2.28
snR14	snR14	YOR015W	Q12169	119 aa		0.79	□□□□□ -2.28
snR14	snR14	YPR145C-A	Q2V2P0	78 aa		0.79	□□□□□ -2.28
snR14	snR14	WIP1	Q2V2P8	89 aa		0.79	□□□□□ -2.28
snR14	snR14	RPS28A	Q3E7X9	67 aa	Predicted RBP	0.79	□□□□□ -2.28
snR14	snR14	PCC1	Q3E833	88 aa		0.79	□□□□□ -2.28
snR14	snR14	MED11	Q99278	115 aa		0.79	□□□□□ -2.28
snR14	snR14	PET20	Q99373	253 aa		0.79	□□□□□ -2.28
snR14	snR14	YOR1	P53049	1477 aa		0.79	□□□□□ -2.28
snR14	snR14	PDR5	P33302	1511 aa	Known RBP	0.79	□□□□□ -2.28
snR14	snR14	STU1	P38198	1513 aa		0.79	□□□□□ -2.28
snR14	snR14	GDB1	Q06625	1536 aa		0.79	□□□□□ -2.28
snR14	snR14	CDC25	P04821	1589 aa		0.79	□□□□□ -2.28
snR14	snR14	MDM35	O60200	86 aa		0.78	□□□□□ -2.28
snR14	snR14	COX5B	P00425	151 aa		0.78	□□□□□ -2.28
snR14	snR14	SPS2	P08459	502 aa		0.78	□□□□□ -2.28
snR14	snR14	ATP5	P09457	212 aa		0.78	□□□□□ -2.28
snR14	snR14	RPL2A	P0CX45	254 aa	Known RBP	0.78	□□□□□ -2.28
snR14	snR14	RPL2B	P0CX46	254 aa	Known RBP	0.78	□□□□□ -2.28
snR14	snR14	RPL35A	P0CX84	120 aa	Known RBP	0.78	□□□□□ -2.28
snR14	snR14	RPL35B	P0CX85	120 aa	Known RBP	0.78	□□□□□ -2.28
snR14	snR14	SPO13	P23624	291 aa		0.78	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 111.5 ms