RNA–Protein interactions for RNA: YPR189W

SKI3, Transcript of Ski complex component and TPR protein, yeastyeast

Gene SKI3, Length 4,299 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKI3YPR189W BRR2P32639 2163 aaKnown RBP1.22□□□□□ -2.21
SKI3YPR189W CDC8P00572 216 aa1.22□□□□□ -2.21
SKI3YPR189W Q0255P03881 472 aa1.22□□□□□ -2.21
SKI3YPR189W RPB3P16370 318 aaKnown RBP1.22□□□□□ -2.21
SKI3YPR189W SUA7P29055 345 aaPredicted RBP1.22□□□□□ -2.21
SKI3YPR189W RPS1AP33442 255 aaKnown RBP1.22□□□□□ -2.21
SKI3YPR189W YBR285WP38354 144 aa1.22□□□□□ -2.21
SKI3YPR189W AVT2P39981 480 aa1.22□□□□□ -2.21
SKI3YPR189W FIS1P40515 155 aa1.22□□□□□ -2.21
SKI3YPR189W MEP2P41948 499 aa1.22□□□□□ -2.21
SKI3YPR189W YGL088WP53151 121 aa1.22□□□□□ -2.21
SKI3YPR189W LSM3P57743 89 aaKnown RBP1.22□□□□□ -2.21
SKI3YPR189W THI74Q04083 370 aa1.22□□□□□ -2.21
SKI3YPR189W MCP1Q12106 302 aa1.22□□□□□ -2.21
SKI3YPR189W BEM2P39960 2167 aaKnown RBP1.22□□□□□ -2.21
SKI3YPR189W RPS19AP07280 144 aaKnown RBP1.22□□□□□ -2.21
SKI3YPR189W RPS19BP07281 144 aaPredicted RBP1.22□□□□□ -2.21
SKI3YPR189W RSA4P25382 515 aaKnown RBP1.22□□□□□ -2.21
SKI3YPR189W GPI14P47088 403 aaKnown RBP1.22□□□□□ -2.21
SKI3YPR189W TTI2P47168 421 aa1.22□□□□□ -2.21
SKI3YPR189W TSC3Q3E790 80 aa1.22□□□□□ -2.21
SKI3YPR189W ISD11Q6Q560 94 aa1.22□□□□□ -2.21
SKI3YPR189W REP2P03872 296 aa1.21□□□□□ -2.22
SKI3YPR189W YLR156WP0CE96 114 aa1.21□□□□□ -2.22
SKI3YPR189W YLR159WP0CE97 114 aa1.21□□□□□ -2.22
SKI3YPR189W YLR161WP0CE98 114 aa1.21□□□□□ -2.22
SKI3YPR189W RCN1P36054 211 aa1.21□□□□□ -2.22
SKI3YPR189W MRPL27P36526 146 aaPredicted RBP1.21□□□□□ -2.22
SKI3YPR189W POP4P38336 279 aa1.21□□□□□ -2.22
SKI3YPR189W TDA4P47153 279 aa1.21□□□□□ -2.22
SKI3YPR189W GIS2P53849 153 aaKnown RBP RIP-Chip data1.21□□□□□ -2.22not detected
SKI3YPR189W IES3Q12345 250 aa1.21□□□□□ -2.22
SKI3YPR189W Q0144Q9ZZW2 109 aa1.21□□□□□ -2.22
SKI3YPR189W ADH1P00330 348 aaKnown RBP1.21□□□□□ -2.22
SKI3YPR189W SGA1P08019 549 aa1.21□□□□□ -2.22
SKI3YPR189W RPL30P14120 105 aaKnown RBP1.21□□□□□ -2.22
SKI3YPR189W STP22P25604 385 aa1.21□□□□□ -2.22
SKI3YPR189W OCH1P31755 480 aa1.21□□□□□ -2.22
SKI3YPR189W PHO88P38264 188 aaPredicted RBP1.21□□□□□ -2.22
SKI3YPR189W PHB1P40961 287 aa1.21□□□□□ -2.22
SKI3YPR189W APJ1P53940 528 aa1.21□□□□□ -2.22
SKI3YPR189W FMN1Q03778 218 aa1.21□□□□□ -2.22
SKI3YPR189W NEJ1Q06148 342 aa1.21□□□□□ -2.22
SKI3YPR189W DGK1Q12382 290 aa1.21□□□□□ -2.22
SKI3YPR189W PSF1Q12488 208 aa1.21□□□□□ -2.22
SKI3YPR189W ATP15P21306 62 aa1.21□□□□□ -2.22
SKI3YPR189W CPR5P35176 225 aa1.21□□□□□ -2.22
SKI3YPR189W CCC1P47818 322 aa1.21□□□□□ -2.22
SKI3YPR189W ALG9P53868 555 aaKnown RBP1.21□□□□□ -2.22
SKI3YPR189W HHT1P61830 136 aa1.21□□□□□ -2.22
SKI3YPR189W YTH1Q06102 208 aaPredicted RBP1.21□□□□□ -2.22
SKI3YPR189W BET1P22804 142 aa1.2□□□□□ -2.22
SKI3YPR189W TRS20P38334 175 aa1.2□□□□□ -2.22
SKI3YPR189W DLS1P40366 167 aa1.2□□□□□ -2.22
SKI3YPR189W PFS2P42841 465 aaKnown RBP1.2□□□□□ -2.22
SKI3YPR189W YFR035CP43608 114 aa1.2□□□□□ -2.22
SKI3YPR189W YFR054CP43622 192 aa1.2□□□□□ -2.22
SKI3YPR189W BUD13P46947 266 aaPredicted RBP1.2□□□□□ -2.22
SKI3YPR189W ATG39Q06159 398 aa1.2□□□□□ -2.22
SKI3YPR189W YCR075W-AQ3E830 75 aa1.2□□□□□ -2.22
SKI3YPR189W MSW1P04803 379 aa1.2□□□□□ -2.22
SKI3YPR189W UGX2P32772 223 aa1.2□□□□□ -2.22
SKI3YPR189W YNL200CP40165 246 aaKnown RBP1.2□□□□□ -2.22
SKI3YPR189W YPL073CP40323 161 aa1.2□□□□□ -2.22
SKI3YPR189W SER2P42941 309 aa1.2□□□□□ -2.22
SKI3YPR189W FIP1P45976 327 aa1.2□□□□□ -2.22
SKI3YPR189W COF1Q03048 143 aaKnown RBP1.2□□□□□ -2.22
SKI3YPR189W FRQ1Q06389 190 aa1.2□□□□□ -2.22
SKI3YPR189W NAT3Q06504 195 aa1.2□□□□□ -2.22
SKI3YPR189W YOL014WQ08110 124 aa1.2□□□□□ -2.22
SKI3YPR189W YMR230W-AQ3E7B5 62 aa1.2□□□□□ -2.22
SKI3YPR189W COS8P38723 381 aa1.2□□□□□ -2.22
SKI3YPR189W YFL019CP43576 117 aa1.2□□□□□ -2.22
SKI3YPR189W ATO3Q12359 275 aa1.2□□□□□ -2.22
SKI3YPR189W YML100W-AQ8TGT0 57 aa1.2□□□□□ -2.22
SKI3YPR189W RPL9AP05738 191 aaKnown RBP1.2□□□□□ -2.22
SKI3YPR189W URA5P13298 226 aaKnown RBP1.2□□□□□ -2.22
SKI3YPR189W PCL1P24867 279 aa1.2□□□□□ -2.22
SKI3YPR189W MIG1P27705 504 aa1.2□□□□□ -2.22
SKI3YPR189W HYM1P32464 399 aa1.2□□□□□ -2.22
SKI3YPR189W ECO1P43605 281 aa1.2□□□□□ -2.22
SKI3YPR189W RPL9BP51401 191 aaKnown RBP1.2□□□□□ -2.22
SKI3YPR189W HAL1Q01766 294 aa1.2□□□□□ -2.22
SKI3YPR189W FCF1Q05498 189 aaPredicted RBP1.2□□□□□ -2.22
SKI3YPR189W HSP30P25619 332 aa1.19□□□□□ -2.22
SKI3YPR189W NSG1P38837 291 aa1.19□□□□□ -2.22
SKI3YPR189W CTR2P38865 189 aa1.19□□□□□ -2.22
SKI3YPR189W HPM1P40481 377 aa1.19□□□□□ -2.22
SKI3YPR189W YPI1P43587 155 aa1.19□□□□□ -2.22
SKI3YPR189W OST2P46964 130 aa1.19□□□□□ -2.22
SKI3YPR189W XPT1P47165 209 aa1.19□□□□□ -2.22
SKI3YPR189W SLO1Q3E784 85 aa1.19□□□□□ -2.22
SKI3YPR189W TAD3Q9URQ3 322 aa1.19□□□□□ -2.22
SKI3YPR189W CCA1P21269 546 aa1.19□□□□□ -2.22
SKI3YPR189W RPS1BP23248 255 aaKnown RBP1.19□□□□□ -2.22
SKI3YPR189W VMA11P32842 164 aa1.19□□□□□ -2.22
SKI3YPR189W YPT53P36019 220 aa1.19□□□□□ -2.22
SKI3YPR189W FYV4P38783 130 aaPredicted RBP1.19□□□□□ -2.22
SKI3YPR189W VTC1P40046 129 aaRIP-Chip data1.19□□□□□ -2.22not detected
SKI3YPR189W GLR1P41921 483 aaKnown RBP1.19□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms