RNA–Protein interactions for RNA: YPR101W

SNT309, Transcript of Member of the NineTeen Complex (NTC), yeast

Gene SNT309, Length 528 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNT309	YPR101W	RPL21B	Q12672	160 aa	Known RBP	5.76	□□□□□ -1.49
SNT309	YPR101W	RPL35A	P0CX84	120 aa	Known RBP	5.75	□□□□□ -1.49
SNT309	YPR101W	RPL35B	P0CX85	120 aa	Known RBP	5.75	□□□□□ -1.49
SNT309	YPR101W	RPS2	P25443	254 aa	Known RBP	5.75	□□□□□ -1.49
SNT309	YPR101W	QRI5	P32344	111 aa		5.75	□□□□□ -1.49
SNT309	YPR101W	PHD1	P36093	366 aa		5.75	□□□□□ -1.49
SNT309	YPR101W	YBR184W	P38299	523 aa		5.75	□□□□□ -1.49
SNT309	YPR101W	AME1	P38313	324 aa		5.75	□□□□□ -1.49
SNT309	YPR101W	DOG1	P38774	246 aa		5.75	□□□□□ -1.49
SNT309	YPR101W	YIL163C	P40448	117 aa		5.75	□□□□□ -1.49
SNT309	YPR101W	RPL9B	P51401	191 aa	Known RBP	5.75	□□□□□ -1.49
SNT309	YPR101W	ATP19	P81451	68 aa		5.75	□□□□□ -1.49
SNT309	YPR101W	TRI1	Q05024	226 aa		5.75	□□□□□ -1.49
SNT309	YPR101W	RFM1	Q12192	310 aa		5.75	□□□□□ -1.49
SNT309	YPR101W	GEP5	Q12393	293 aa		5.75	□□□□□ -1.49
SNT309	YPR101W	YER190C-B	P0CX94	160 aa		5.74	□□□□□ -1.49
SNT309	YPR101W	YEL077W-A	P0CX95	160 aa		5.74	□□□□□ -1.49
SNT309	YPR101W	YGR296C-B	P0CX96	160 aa		5.74	□□□□□ -1.49
SNT309	YPR101W	YPL283W-B	P0CX97	160 aa		5.74	□□□□□ -1.49
SNT309	YPR101W	YPR204C-A	P0CX98	160 aa		5.74	□□□□□ -1.49
SNT309	YPR101W	MRS3	P10566	314 aa		5.74	□□□□□ -1.49
SNT309	YPR101W	HAP3	P13434	144 aa		5.74	□□□□□ -1.49
SNT309	YPR101W	HSP12	P22943	109 aa	Known RBP	5.74	□□□□□ -1.49
SNT309	YPR101W	VMA16	P23968	213 aa		5.74	□□□□□ -1.49
SNT309	YPR101W	PMU1	P36069	295 aa		5.74	□□□□□ -1.49
SNT309	YPR101W	YHR173C	P38864	112 aa		5.74	□□□□□ -1.49
SNT309	YPR101W	SSU72	P53538	206 aa	Predicted RBP	5.74	□□□□□ -1.49
SNT309	YPR101W	YOL024W	Q08172	172 aa		5.74	□□□□□ -1.49
SNT309	YPR101W	NAT5	Q08689	176 aa		5.74	□□□□□ -1.49
SNT309	YPR101W	HFA1	P32874	2273 aa		5.74	□□□□□ -1.49
SNT309	YPR101W	YMR316C-A	I2HB70	103 aa		5.73	□□□□□ -1.49
SNT309	YPR101W	TIR1	P10863	254 aa		5.73	□□□□□ -1.49
SNT309	YPR101W	RPB10	P22139	70 aa		5.73	□□□□□ -1.49
SNT309	YPR101W	NNK1	P36003	928 aa		5.73	□□□□□ -1.49
SNT309	YPR101W	PAM17	P36147	197 aa		5.73	□□□□□ -1.49
SNT309	YPR101W	YER134C	P40081	178 aa		5.73	□□□□□ -1.49
SNT309	YPR101W	YJL118W	P47022	219 aa		5.73	□□□□□ -1.49
SNT309	YPR101W	YNR064C	P53750	290 aa		5.73	□□□□□ -1.49
SNT309	YPR101W	YHP1	Q04116	353 aa		5.73	□□□□□ -1.49
SNT309	YPR101W	TVP18	Q04767	167 aa		5.73	□□□□□ -1.49
SNT309	YPR101W	POS5	Q06892	414 aa		5.73	□□□□□ -1.49
SNT309	YPR101W	PAU23	Q07987	124 aa		5.73	□□□□□ -1.49
SNT309	YPR101W	TPT1	Q12272	230 aa	Known RBP	5.73	□□□□□ -1.49
SNT309	YPR101W	PAU17	Q12370	124 aa		5.73	□□□□□ -1.49
SNT309	YPR101W	YCR024C-B	Q3E7Z8	88 aa		5.73	□□□□□ -1.49
SNT309	YPR101W	PIS1	P06197	220 aa	Known RBP	5.72	□□□□□ -1.49
SNT309	YPR101W	CUP2	P15315	225 aa		5.72	□□□□□ -1.49
SNT309	YPR101W	TEM1	P38987	245 aa		5.72	□□□□□ -1.49
SNT309	YPR101W	PRE5	P40302	234 aa	Known RBP	5.72	□□□□□ -1.49
SNT309	YPR101W	YFL054C	P43549	646 aa		5.72	□□□□□ -1.49
SNT309	YPR101W	YGL118C	P53132	145 aa		5.72	□□□□□ -1.49
SNT309	YPR101W	PKR1	Q03880	122 aa	Known RBP	5.72	□□□□□ -1.49
SNT309	YPR101W	NDE2	Q07500	545 aa		5.72	□□□□□ -1.49
SNT309	YPR101W	WTM2	Q12206	467 aa		5.72	□□□□□ -1.49
SNT309	YPR101W	YOS1	Q3E834	85 aa		5.72	□□□□□ -1.49
SNT309	YPR101W	YCR007C	P25354	239 aa		5.71	□□□□□ -1.5
SNT309	YPR101W	YDL183C	P48569	320 aa		5.71	□□□□□ -1.5
SNT309	YPR101W	YMR166C	Q03829	368 aa		5.71	□□□□□ -1.5
SNT309	YPR101W	GIM5	Q04493	163 aa		5.71	□□□□□ -1.5
SNT309	YPR101W	YDR114C	Q04597	100 aa		5.71	□□□□□ -1.5
SNT309	YPR101W	YDL157C	Q12082	118 aa		5.71	□□□□□ -1.5
SNT309	YPR101W	HEM4	P06174	275 aa		5.7	□□□□□ -1.5
SNT309	YPR101W	RPS23A	P0CX29	145 aa	Known RBP	5.7	□□□□□ -1.5
SNT309	YPR101W	RPS23B	P0CX30	145 aa		5.7	□□□□□ -1.5
SNT309	YPR101W	NOP1	P15646	327 aa	Known RBP	5.7	□□□□□ -1.5
SNT309	YPR101W	GSP1	P32835	219 aa	Known RBP	5.7	□□□□□ -1.5
SNT309	YPR101W	GSP2	P32836	220 aa	Known RBP	5.7	□□□□□ -1.5
SNT309	YPR101W	UME6	P39001	836 aa		5.7	□□□□□ -1.5
SNT309	YPR101W	YJL028W	P47062	111 aa		5.7	□□□□□ -1.5
SNT309	YPR101W	COX18	P53239	316 aa		5.7	□□□□□ -1.5
SNT309	YPR101W	CWC27	Q02770	301 aa		5.7	□□□□□ -1.5
SNT309	YPR101W	MRX11	Q03079	207 aa		5.7	□□□□□ -1.5
SNT309	YPR101W	FIT2	Q08906	153 aa		5.7	□□□□□ -1.5
SNT309	YPR101W	RNH203	Q12338	110 aa		5.7	□□□□□ -1.5
SNT309	YPR101W	YLR302C	O13544	120 aa		5.69	□□□□□ -1.5
SNT309	YPR101W	SEC4	P07560	215 aa	Known RBP	5.69	□□□□□ -1.5
SNT309	YPR101W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	5.69	□□□□□ -1.5	not detected
SNT309	YPR101W	UTR5	P32630	166 aa		5.69	□□□□□ -1.5
SNT309	YPR101W	ZRT1	P32804	376 aa		5.69	□□□□□ -1.5
SNT309	YPR101W	SOR1	P35497	357 aa	Known RBP	5.69	□□□□□ -1.5
SNT309	YPR101W	YBR090C	P38253	122 aa		5.69	□□□□□ -1.5
SNT309	YPR101W	TDA4	P47153	279 aa		5.69	□□□□□ -1.5
SNT309	YPR101W	YNR071C	P53757	342 aa		5.69	□□□□□ -1.5
SNT309	YPR101W	RAV2	Q03956	351 aa		5.69	□□□□□ -1.5
SNT309	YPR101W	SOR2	Q07786	357 aa		5.69	□□□□□ -1.5
SNT309	YPR101W	CSM4	Q08955	156 aa		5.69	□□□□□ -1.5
SNT309	YPR101W	YPL162C	Q12042	273 aa		5.69	□□□□□ -1.5
SNT309	YPR101W	ATP10	P18496	279 aa		5.68	□□□□□ -1.5
SNT309	YPR101W	LDB16	P25587	256 aa		5.68	□□□□□ -1.5
SNT309	YPR101W	YBL071C	P38185	102 aa		5.68	□□□□□ -1.5
SNT309	YPR101W	CSH1	P38287	376 aa		5.68	□□□□□ -1.5
SNT309	YPR101W	BDH1	P39714	382 aa		5.68	□□□□□ -1.5
SNT309	YPR101W	RPS26B	P39939	119 aa	Known RBP	5.68	□□□□□ -1.5
SNT309	YPR101W	GZF3	P42944	551 aa	Known RBP	5.68	□□□□□ -1.5
SNT309	YPR101W	PIR5	P46999	287 aa		5.68	□□□□□ -1.5
SNT309	YPR101W	YGR151C	P53287	111 aa		5.68	□□□□□ -1.5
SNT309	YPR101W	FOL3	Q12676	427 aa	Predicted RBP	5.68	□□□□□ -1.5
SNT309	YPR101W	YPR117W	Q06116	2489 aa		5.68	□□□□□ -1.5
SNT309	YPR101W	HTB1	P02293	131 aa	Known RBP	5.67	□□□□□ -1.5
SNT309	YPR101W	MRS1	P07266	363 aa		5.67	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 57 ms