RNA–Protein interactions for RNA: YPR029C

APL4, Transcript of Gamma-adaptin, yeast

Gene APL4, Length 2,499 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APL4	YPR029C	SAY1	P53324	424 aa		3.06	□□□□□ -1.92
APL4	YPR029C	YML100W-A	Q8TGT0	57 aa		3.06	□□□□□ -1.92
APL4	YPR029C	ADH3	P07246	375 aa	Known RBP	3.05	□□□□□ -1.92
APL4	YPR029C	ATR1	P13090	542 aa		3.05	□□□□□ -1.92
APL4	YPR029C	URA5	P13298	226 aa	Known RBP	3.05	□□□□□ -1.92
APL4	YPR029C	CLB6	P32943	380 aa		3.05	□□□□□ -1.92
APL4	YPR029C	MOH1	P38191	138 aa		3.05	□□□□□ -1.92
APL4	YPR029C	SPG1	P50088	95 aa		3.05	□□□□□ -1.92
APL4	YPR029C	YGL262W	P53054	175 aa		3.05	□□□□□ -1.92
APL4	YPR029C	YPL067C	Q02754	198 aa		3.05	□□□□□ -1.92
APL4	YPR029C	YOL014W	Q08110	124 aa		3.05	□□□□□ -1.92
APL4	YPR029C	FEX1	Q08913	375 aa		3.05	□□□□□ -1.92
APL4	YPR029C	YPR011C	Q12251	326 aa		3.05	□□□□□ -1.92
APL4	YPR029C	KOG1	P38873	1557 aa		3.05	□□□□□ -1.92
APL4	YPR029C	DNF2	Q12675	1612 aa		3.05	□□□□□ -1.92
APL4	YPR029C	SNF2	P22082	1703 aa		3.05	□□□□□ -1.92
APL4	YPR029C	COX5B	P00425	151 aa		3.05	□□□□□ -1.92
APL4	YPR029C	YPR170W-B	P0C5R9	85 aa		3.05	□□□□□ -1.92
APL4	YPR029C	FMT1	P32785	401 aa		3.05	□□□□□ -1.92
APL4	YPR029C	MIX23	P38162	196 aa		3.05	□□□□□ -1.92
APL4	YPR029C	OM14	P38325	134 aa		3.05	□□□□□ -1.92
APL4	YPR029C	CLD1	P53264	445 aa		3.05	□□□□□ -1.92
APL4	YPR029C	YMR090W	Q04304	227 aa	Known RBP	3.05	□□□□□ -1.92
APL4	YPR029C	FCF1	Q05498	189 aa	Predicted RBP	3.05	□□□□□ -1.92
APL4	YPR029C	NIP7	Q08962	181 aa	Known RBP	3.05	□□□□□ -1.92
APL4	YPR029C	BSC1	Q12140	328 aa		3.05	□□□□□ -1.92
APL4	YPR029C	YLR122C	Q12312	125 aa		3.05	□□□□□ -1.92
APL4	YPR029C	YHR213W-A	Q8TGT4	77 aa		3.05	□□□□□ -1.92
APL4	YPR029C	HAP1	P0CE41	1502 aa		3.05	□□□□□ -1.92
APL4	YPR029C	TMA10	Q06177	86 aa		3.04	□□□□□ -1.92
APL4	YPR029C	YPL264C	Q08980	353 aa		3.04	□□□□□ -1.92
APL4	YPR029C	EMP24	P32803	203 aa	Known RBP	3.04	□□□□□ -1.92
APL4	YPR029C	VMA11	P32842	164 aa		3.04	□□□□□ -1.92
APL4	YPR029C	YNL200C	P40165	246 aa	Known RBP	3.04	□□□□□ -1.92
APL4	YPR029C	CUP9	P41817	306 aa		3.04	□□□□□ -1.92
APL4	YPR029C	MPC1	P53157	130 aa	Known RBP	3.04	□□□□□ -1.92
APL4	YPR029C	MED11	Q99278	115 aa		3.04	□□□□□ -1.92
APL4	YPR029C	CDC25	P04821	1589 aa		3.04	□□□□□ -1.92
APL4	YPR029C	CPA1	P07258	411 aa	Known RBP	3.03	□□□□□ -1.92
APL4	YPR029C	YCR099C	P25657	155 aa		3.03	□□□□□ -1.92
APL4	YPR029C	ZRT3	P34240	503 aa		3.03	□□□□□ -1.92
APL4	YPR029C	TMA19	P35691	167 aa	Known RBP	3.03	□□□□□ -1.92
APL4	YPR029C	AVT6	P40074	448 aa		3.03	□□□□□ -1.92
APL4	YPR029C	YER134C	P40081	178 aa		3.03	□□□□□ -1.92
APL4	YPR029C	YFL019C	P43576	117 aa		3.03	□□□□□ -1.92
APL4	YPR029C	YGR026W	P53217	278 aa		3.03	□□□□□ -1.92
APL4	YPR029C	SHH3	Q04487	196 aa		3.03	□□□□□ -1.92
APL4	YPR029C	YLR112W	Q12130	139 aa		3.03	□□□□□ -1.92
APL4	YPR029C	JID1	Q12350	301 aa		3.03	□□□□□ -1.92
APL4	YPR029C	PDR15	Q04182	1529 aa	Known RBP	3.03	□□□□□ -1.92
APL4	YPR029C	RAS2	P01120	322 aa	Known RBP	3.03	□□□□□ -1.92
APL4	YPR029C	STF2	P16965	84 aa		3.03	□□□□□ -1.92
APL4	YPR029C	YIR035C	P40579	254 aa		3.03	□□□□□ -1.92
APL4	YPR029C	YPL039W	Q03080	316 aa		3.03	□□□□□ -1.92
APL4	YPR029C	YMR252C	Q04814	134 aa		3.03	□□□□□ -1.92
APL4	YPR029C	TY1B-DR1	Q03855	1755 aa		3.03	□□□□□ -1.92
APL4	YPR029C	TY1B-DR3	Q99231	1755 aa		3.03	□□□□□ -1.92
APL4	YPR029C	RPL9A	P05738	191 aa	Known RBP	3.02	□□□□□ -1.93
APL4	YPR029C	YGL010W	P25338	174 aa		3.02	□□□□□ -1.93
APL4	YPR029C	HPA3	P39979	161 aa		3.02	□□□□□ -1.93
APL4	YPR029C	YNL208W	P40159	199 aa	Known RBP	3.02	□□□□□ -1.93
APL4	YPR029C	RPL9B	P51401	191 aa	Known RBP	3.02	□□□□□ -1.93
APL4	YPR029C	SMD1	Q02260	146 aa	Predicted RBP	3.02	□□□□□ -1.93
APL4	YPR029C	YPR174C	Q06616	221 aa	Predicted RBP	3.02	□□□□□ -1.93
APL4	YPR029C	RRT7	Q07829	113 aa		3.02	□□□□□ -1.93
APL4	YPR029C	RKR1	Q04781	1562 aa		3.02	□□□□□ -1.93
APL4	YPR029C	MSW1	P04803	379 aa		3.02	□□□□□ -1.93
APL4	YPR029C	YAR068W	P39564	161 aa		3.02	□□□□□ -1.93
APL4	YPR029C	CCS1	P40202	249 aa	Known RBP	3.02	□□□□□ -1.93
APL4	YPR029C	EMI1	Q04406	187 aa		3.02	□□□□□ -1.93
APL4	YPR029C	GPI11	Q06636	219 aa		3.02	□□□□□ -1.93
APL4	YPR029C	FIT3	Q08907	204 aa		3.02	□□□□□ -1.93
APL4	YPR029C	TIM22	Q12328	207 aa		3.02	□□□□□ -1.93
APL4	YPR029C	YLR111W	Q12528	110 aa		3.02	□□□□□ -1.93
APL4	YPR029C	SNQ2	P32568	1501 aa	Known RBP	3.01	□□□□□ -1.93
APL4	YPR029C	RPS13	P05756	151 aa	Known RBP	3.01	□□□□□ -1.93
APL4	YPR029C	YJL028W	P47062	111 aa		3.01	□□□□□ -1.93
APL4	YPR029C	RSM10	Q03201	203 aa		3.01	□□□□□ -1.93
APL4	YPR029C	ANT1	Q06497	328 aa		3.01	□□□□□ -1.93
APL4	YPR029C	PST1	Q12355	444 aa		3.01	□□□□□ -1.93
APL4	YPR029C	TY1B-BR	Q12193	1756 aa		3.01	□□□□□ -1.93
APL4	YPR029C	PDR12	Q02785	1511 aa		3.01	□□□□□ -1.93
APL4	YPR029C	YLR156W	P0CE96	114 aa		3.01	□□□□□ -1.93
APL4	YPR029C	YLR159W	P0CE97	114 aa		3.01	□□□□□ -1.93
APL4	YPR029C	YLR161W	P0CE98	114 aa		3.01	□□□□□ -1.93
APL4	YPR029C	HMRA1	P0CY11	126 aa		3.01	□□□□□ -1.93
APL4	YPR029C	NOP1	P15646	327 aa	Known RBP	3.01	□□□□□ -1.93
APL4	YPR029C	YCR022C	P25620	114 aa		3.01	□□□□□ -1.93
APL4	YPR029C	YCR050C	P25630	102 aa		3.01	□□□□□ -1.93
APL4	YPR029C	PAM17	P36147	197 aa		3.01	□□□□□ -1.93
APL4	YPR029C	FYV4	P38783	130 aa	Predicted RBP	3.01	□□□□□ -1.93
APL4	YPR029C	FEX2	Q08991	375 aa		3.01	□□□□□ -1.93
APL4	YPR029C	YDR029W	Q12111	104 aa		3.01	□□□□□ -1.93
APL4	YPR029C	YAL063C-A	Q3E791	96 aa		3.01	□□□□□ -1.93
APL4	YPR029C	TY3B-G	Q99315	1547 aa		3.01	□□□□□ -1.93
APL4	YPR029C	CDC43	P18898	376 aa		3	□□□□□ -1.93
APL4	YPR029C	DDR48	P18899	430 aa	Known RBP	3	□□□□□ -1.93
APL4	YPR029C	MSA2	P36157	363 aa		3	□□□□□ -1.93
APL4	YPR029C	PGU1	P47180	361 aa		3	□□□□□ -1.93
APL4	YPR029C	SYM1	Q06563	197 aa		3	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 37.6 ms