RNA–Protein interactions for RNA: YOR166C

SWT1, Transcript of RNA endoribonuclease involved in perinuclear mRNP quality control, yeastyeast

Gene SWT1, Length 1,377 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWT1YOR166C UPS1Q05776 175 aa0.75□□□□□ -2.29
SWT1YOR166C YGL041W-AP0C5N3 154 aa0.74□□□□□ -2.29
SWT1YOR166C YGR269WP40326 108 aa0.74□□□□□ -2.29
SWT1YOR166C NSE4P43124 402 aa0.74□□□□□ -2.29
SWT1YOR166C TTI2P47168 421 aa0.74□□□□□ -2.29
SWT1YOR166C LIP1Q03579 150 aa0.74□□□□□ -2.29
SWT1YOR166C YLR050CQ12155 161 aaKnown RBP0.74□□□□□ -2.29
SWT1YOR166C RPS25BP0C0T4 108 aaKnown RBP0.73□□□□□ -2.29
SWT1YOR166C AQY2P0CD90 149 aa0.73□□□□□ -2.29
SWT1YOR166C APA2P22108 325 aa0.73□□□□□ -2.29
SWT1YOR166C PTC1P35182 281 aa0.73□□□□□ -2.29
SWT1YOR166C YHL037CP38733 133 aa0.73□□□□□ -2.29
SWT1YOR166C YEL073CP39974 107 aa0.73□□□□□ -2.29
SWT1YOR166C APS3P47064 194 aa0.73□□□□□ -2.29
SWT1YOR166C NQM1P53228 333 aaPredicted RBP0.73□□□□□ -2.29
SWT1YOR166C YOR072WQ08486 104 aa0.73□□□□□ -2.29
SWT1YOR166C YLR046CQ12253 270 aa0.73□□□□□ -2.29
SWT1YOR166C RPS25AQ3E792 108 aaPredicted RBP0.73□□□□□ -2.29
SWT1YOR166C CYR1P08678 2026 aaKnown RBP0.72□□□□□ -2.29
SWT1YOR166C YER188C-AP0C0V2 99 aa0.72□□□□□ -2.29
SWT1YOR166C ARC19P33204 171 aaKnown RBP0.72□□□□□ -2.29
SWT1YOR166C ETR1P38071 380 aa0.72□□□□□ -2.29
SWT1YOR166C FES1P38260 290 aa0.72□□□□□ -2.29
SWT1YOR166C ATP19P81451 68 aa0.72□□□□□ -2.29
SWT1YOR166C YDC1Q02896 317 aa0.72□□□□□ -2.29
SWT1YOR166C RIM9Q04734 239 aa0.72□□□□□ -2.29
SWT1YOR166C SYM1Q06563 197 aa0.72□□□□□ -2.29
SWT1YOR166C FCY1Q12178 158 aa0.72□□□□□ -2.29
SWT1YOR166C SPA2P23201 1466 aaKnown RBP0.72□□□□□ -2.29
SWT1YOR166C PBI2P0CT04 75 aaKnown RBP0.71□□□□□ -2.3
SWT1YOR166C RME1P32338 300 aaKnown RBP0.71□□□□□ -2.3
SWT1YOR166C UGX2P32772 223 aa0.71□□□□□ -2.3
SWT1YOR166C FMP23P38231 175 aa0.71□□□□□ -2.3
SWT1YOR166C SMD2Q06217 110 aaKnown RBP0.71□□□□□ -2.3
SWT1YOR166C CMC2Q3E7A4 109 aa0.71□□□□□ -2.3
SWT1YOR166C HYP2P23301 157 aaKnown RBP0.7□□□□□ -2.3
SWT1YOR166C YKR070WP36151 352 aaKnown RBP0.7□□□□□ -2.3
SWT1YOR166C YEL028WP39989 153 aa0.7□□□□□ -2.3
SWT1YOR166C MPM1P40364 252 aa0.7□□□□□ -2.3
SWT1YOR166C EFM5P53200 248 aaKnown RBP0.7□□□□□ -2.3
SWT1YOR166C GIM5Q04493 163 aa0.7□□□□□ -2.3
SWT1YOR166C KEI1Q06346 221 aa0.7□□□□□ -2.3
SWT1YOR166C GRE1Q08969 168 aa0.7□□□□□ -2.3
SWT1YOR166C YPR203WQ08994 102 aa0.7□□□□□ -2.3
SWT1YOR166C TAF2P23255 1407 aa0.7□□□□□ -2.3
SWT1YOR166C ADE6P38972 1358 aaKnown RBP0.7□□□□□ -2.3
SWT1YOR166C ACC1Q00955 2233 aaKnown RBP0.7□□□□□ -2.3
SWT1YOR166C SPS2P08459 502 aa0.7□□□□□ -2.3
SWT1YOR166C RPL35AP0CX84 120 aaKnown RBP0.7□□□□□ -2.3
SWT1YOR166C RPL35BP0CX85 120 aaKnown RBP0.7□□□□□ -2.3
SWT1YOR166C SRL3P36167 246 aa0.7□□□□□ -2.3
SWT1YOR166C YPD1Q07688 167 aa0.7□□□□□ -2.3
SWT1YOR166C QCR2P07257 368 aa0.69□□□□□ -2.3
SWT1YOR166C PAC10P48363 199 aa0.69□□□□□ -2.3
SWT1YOR166C YIP3P53633 176 aa0.69□□□□□ -2.3
SWT1YOR166C RRT7Q07829 113 aa0.69□□□□□ -2.3
SWT1YOR166C LCL2Q08045 131 aa0.69□□□□□ -2.3
SWT1YOR166C YOR381W-AQ3E804 55 aa0.69□□□□□ -2.3
SWT1YOR166C YHR213W-BQ8TGK1 99 aa0.69□□□□□ -2.3
SWT1YOR166C TAR1Q8TGM6 124 aa0.69□□□□□ -2.3
SWT1YOR166C KIN28P06242 306 aa0.68□□□□□ -2.3
SWT1YOR166C RPS28BP0C0X0 67 aaKnown RBP0.68□□□□□ -2.3
SWT1YOR166C YKR041WP36134 250 aa0.68□□□□□ -2.3
SWT1YOR166C SHB17P36136 271 aaKnown RBP0.68□□□□□ -2.3
SWT1YOR166C YJL009WP47078 108 aa0.68□□□□□ -2.3
SWT1YOR166C YGL230CP53074 147 aa0.68□□□□□ -2.3
SWT1YOR166C YGL193CP53097 103 aa0.68□□□□□ -2.3
SWT1YOR166C TMA23Q03525 211 aa0.68□□□□□ -2.3
SWT1YOR166C THI74Q04083 370 aa0.68□□□□□ -2.3
SWT1YOR166C ATG10Q07879 167 aa0.68□□□□□ -2.3
SWT1YOR166C YLR053CQ12026 108 aa0.68□□□□□ -2.3
SWT1YOR166C CCW12Q12127 133 aa0.68□□□□□ -2.3
SWT1YOR166C PST2Q12335 198 aaKnown RBP0.68□□□□□ -2.3
SWT1YOR166C RPS28AQ3E7X9 67 aaPredicted RBP0.68□□□□□ -2.3
SWT1YOR166C BUB2P26448 306 aaPredicted RBP0.67□□□□□ -2.3
SWT1YOR166C AME1P38313 324 aa0.67□□□□□ -2.3
SWT1YOR166C FYV4P38783 130 aaPredicted RBP0.67□□□□□ -2.3
SWT1YOR166C YEL014CP39999 101 aa0.67□□□□□ -2.3
SWT1YOR166C YER121WP40076 114 aa0.67□□□□□ -2.3
SWT1YOR166C YGL101WP53144 215 aa0.67□□□□□ -2.3
SWT1YOR166C ATP5P09457 212 aa0.66□□□□□ -2.3
SWT1YOR166C FIG1P38224 298 aa0.66□□□□□ -2.3
SWT1YOR166C HTD2P38790 280 aaKnown RBP0.66□□□□□ -2.3
SWT1YOR166C YNR064CP53750 290 aa0.66□□□□□ -2.3
SWT1YOR166C YNL122CP53921 115 aaPredicted RBP0.66□□□□□ -2.3
SWT1YOR166C YCR001WP25347 104 aa0.65□□□□□ -2.31
SWT1YOR166C PEX34P25584 144 aa0.65□□□□□ -2.31
SWT1YOR166C CSH1P38287 376 aa0.65□□□□□ -2.31
SWT1YOR166C DLS1P40366 167 aa0.65□□□□□ -2.31
SWT1YOR166C IRC21Q04772 201 aa0.65□□□□□ -2.31
SWT1YOR166C NMA1Q06178 401 aaKnown RBP0.65□□□□□ -2.31
SWT1YOR166C PET20Q99373 253 aa0.65□□□□□ -2.31
SWT1YOR166C RPS22AP0C0W1 130 aaKnown RBP0.64□□□□□ -2.31
SWT1YOR166C DER1P38307 211 aa0.64□□□□□ -2.31
SWT1YOR166C SOL1P50278 321 aa0.64□□□□□ -2.31
SWT1YOR166C LSM3P57743 89 aaKnown RBP0.64□□□□□ -2.31
SWT1YOR166C NSL1Q12143 216 aa0.64□□□□□ -2.31
SWT1YOR166C RDI1Q12434 202 aa0.64□□□□□ -2.31
SWT1YOR166C HUT1Q12520 339 aa0.64□□□□□ -2.31
SWT1YOR166C RPS22BQ3E7Y3 130 aaKnown RBP0.64□□□□□ -2.31
Retrieved 100 of 5,963 RNA–protein pairs in 42.8 ms