RNA–Protein interactions for RNA: YOR142W

LSC1, Transcript of Alpha subunit of succinyl-CoA ligase, yeastyeast

Gene LSC1, Length 990 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSC1YOR142W FCF2Q12035 217 aaPredicted RBP5.09□□□□□ -1.59
LSC1YOR142W YLR125WQ12138 136 aa5.09□□□□□ -1.59
LSC1YOR142W CDC50P25656 391 aa5.08□□□□□ -1.6
LSC1YOR142W AHT1P29589 182 aa5.08□□□□□ -1.6
LSC1YOR142W AUA1P32450 94 aa5.08□□□□□ -1.6
LSC1YOR142W EMP24P32803 203 aaKnown RBP5.08□□□□□ -1.6
LSC1YOR142W YBL059WP34224 193 aa5.08□□□□□ -1.6
LSC1YOR142W PTC7P38797 343 aa5.08□□□□□ -1.6
LSC1YOR142W ASP1P38986 381 aaPredicted RBP5.08□□□□□ -1.6
LSC1YOR142W SIM1P40472 476 aa5.08□□□□□ -1.6
LSC1YOR142W HAM1P47119 197 aaKnown RBP5.08□□□□□ -1.6
LSC1YOR142W ECM27P47144 725 aa5.08□□□□□ -1.6
LSC1YOR142W GNP1P48813 663 aa5.08□□□□□ -1.6
LSC1YOR142W JAC1P53193 184 aa5.08□□□□□ -1.6
LSC1YOR142W OCA2P53949 197 aa5.08□□□□□ -1.6
LSC1YOR142W YDR274CP87283 123 aa5.08□□□□□ -1.6
LSC1YOR142W ODC1Q03028 310 aa5.08□□□□□ -1.6
LSC1YOR142W YMR007WQ03675 126 aa5.08□□□□□ -1.6
LSC1YOR142W LRS4Q04087 347 aaKnown RBP5.08□□□□□ -1.6
LSC1YOR142W MSC3Q05812 728 aa5.08□□□□□ -1.6
LSC1YOR142W YLR179CQ06252 201 aaKnown RBP5.08□□□□□ -1.6
LSC1YOR142W AYT1Q12226 474 aa5.08□□□□□ -1.6
LSC1YOR142W DFR1P07807 211 aaKnown RBP RIP-Chip data5.07□□□□□ -1.6not detected
LSC1YOR142W UBI4P0CG63 381 aaKnown RBP5.07□□□□□ -1.6
LSC1YOR142W SPO13P23624 291 aa5.07□□□□□ -1.6
LSC1YOR142W SDH4P37298 181 aa5.07□□□□□ -1.6
LSC1YOR142W LSM2P38203 95 aaKnown RBP5.07□□□□□ -1.6
LSC1YOR142W DER1P38307 211 aa5.07□□□□□ -1.6
LSC1YOR142W PEX7P39108 375 aa5.07□□□□□ -1.6
LSC1YOR142W GCV3P39726 170 aaPredicted RBP5.07□□□□□ -1.6
LSC1YOR142W LCB3P47013 409 aa5.07□□□□□ -1.6
LSC1YOR142W YLR281CQ05863 155 aa5.07□□□□□ -1.6
LSC1YOR142W SFT2P38166 215 aa5.06□□□□□ -1.6
LSC1YOR142W FLO5P38894 1075 aa5.06□□□□□ -1.6
LSC1YOR142W PET100P38958 111 aa5.06□□□□□ -1.6
LSC1YOR142W TDA4P47153 279 aa5.06□□□□□ -1.6
LSC1YOR142W SDH7Q04401 133 aa5.06□□□□□ -1.6
LSC1YOR142W AVO2Q04749 426 aa5.06□□□□□ -1.6
LSC1YOR142W TRI1Q05024 226 aa5.06□□□□□ -1.6
LSC1YOR142W LDS2Q08218 356 aa5.06□□□□□ -1.6
LSC1YOR142W COX2P00410 251 aa5.05□□□□□ -1.6
LSC1YOR142W QCR9P22289 66 aa5.05□□□□□ -1.6
LSC1YOR142W SRL3P36167 246 aa5.05□□□□□ -1.6
LSC1YOR142W SNF11P38956 169 aa5.05□□□□□ -1.6
LSC1YOR142W GET2P40056 285 aa5.05□□□□□ -1.6
LSC1YOR142W MRPL50P53724 139 aa5.05□□□□□ -1.6
LSC1YOR142W MRPS17Q03246 237 aaPredicted RBP5.05□□□□□ -1.6
LSC1YOR142W RRG8Q06109 277 aa5.05□□□□□ -1.6
LSC1YOR142W YOR015WQ12169 119 aa5.05□□□□□ -1.6
LSC1YOR142W YRA2P36036 203 aaKnown RBP RIP-Chip data5.04□□□□□ -1.6not detected
LSC1YOR142W CMC1P36064 111 aa5.04□□□□□ -1.6
LSC1YOR142W SAS2P40963 338 aa5.04□□□□□ -1.6
LSC1YOR142W GPI2P46961 280 aa5.04□□□□□ -1.6
LSC1YOR142W AIM24P47127 394 aa5.04□□□□□ -1.6
LSC1YOR142W MIC26P50087 233 aa5.04□□□□□ -1.6
LSC1YOR142W ORM1P53224 222 aa5.04□□□□□ -1.6
LSC1YOR142W YNR066CP53752 436 aa5.04□□□□□ -1.6
LSC1YOR142W PLP1Q04004 230 aa5.04□□□□□ -1.6
LSC1YOR142W PRM7Q12459 698 aa5.04□□□□□ -1.6
LSC1YOR142W YOR011W-AQ3E807 68 aa5.04□□□□□ -1.6
LSC1YOR142W YBR298C-AQ8TGK4 73 aa5.04□□□□□ -1.6
LSC1YOR142W ERS1P17261 260 aa5.03□□□□□ -1.6
LSC1YOR142W NRG2P38082 220 aa5.03□□□□□ -1.6
LSC1YOR142W SRB7P47822 140 aa5.03□□□□□ -1.6
LSC1YOR142W DSK2P48510 373 aa5.03□□□□□ -1.6
LSC1YOR142W DUO1P53168 247 aaKnown RBP5.03□□□□□ -1.6
LSC1YOR142W ALG13P53178 202 aa5.03□□□□□ -1.6
LSC1YOR142W YNR071CP53757 342 aa5.03□□□□□ -1.6
LSC1YOR142W FYV6P53913 173 aa5.03□□□□□ -1.6
LSC1YOR142W ADD37Q03233 198 aa5.03□□□□□ -1.6
LSC1YOR142W YOL160WQ08321 113 aa5.03□□□□□ -1.6
LSC1YOR142W MRP2P10663 115 aaPredicted RBP5.02□□□□□ -1.61
LSC1YOR142W PRE9P23638 258 aaKnown RBP5.02□□□□□ -1.61
LSC1YOR142W TIR2P33890 251 aa5.02□□□□□ -1.61
LSC1YOR142W YIL077CP40508 320 aa5.02□□□□□ -1.61
LSC1YOR142W RIB4P50861 169 aaPredicted RBP5.02□□□□□ -1.61
LSC1YOR142W UBC7Q02159 165 aa5.02□□□□□ -1.61
LSC1YOR142W RPS2P25443 254 aaKnown RBP5.01□□□□□ -1.61
LSC1YOR142W YBR292CP38357 123 aa5.01□□□□□ -1.61
LSC1YOR142W VMA22P38784 181 aa5.01□□□□□ -1.61
LSC1YOR142W PHO23P50947 330 aa5.01□□□□□ -1.61
LSC1YOR142W YIP3P53633 176 aa5.01□□□□□ -1.61
LSC1YOR142W IZH1Q03419 316 aa5.01□□□□□ -1.61
LSC1YOR142W SCW10Q04951 389 aa5.01□□□□□ -1.61
LSC1YOR142W IZH3Q07959 543 aa5.01□□□□□ -1.61
LSC1YOR142W FIT2Q08906 153 aa5.01□□□□□ -1.61
LSC1YOR142W DDI2P0CH63 225 aa5□□□□□ -1.61
LSC1YOR142W DDI3P0CH64 225 aa5□□□□□ -1.61
LSC1YOR142W RPS0AP32905 252 aaKnown RBP5□□□□□ -1.61
LSC1YOR142W TRS20P38334 175 aa5□□□□□ -1.61
LSC1YOR142W EMC5P40540 141 aa5□□□□□ -1.61
LSC1YOR142W ATC1Q04005 294 aa5□□□□□ -1.61
LSC1YOR142W YMR244WQ04018 355 aa5□□□□□ -1.61
LSC1YOR142W COA4Q05809 96 aa5□□□□□ -1.61
LSC1YOR142W SDO1Q07953 250 aaKnown RBP5□□□□□ -1.61
LSC1YOR142W COX19Q3E731 98 aa5□□□□□ -1.61
LSC1YOR142W RPL14AP36105 138 aaKnown RBP4.99□□□□□ -1.61
LSC1YOR142W RPL14BP38754 138 aaKnown RBP4.99□□□□□ -1.61
LSC1YOR142W MBB1P39534 108 aa4.99□□□□□ -1.61
LSC1YOR142W HUA1P40325 198 aa4.99□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 125.5 ms