RNA–Protein interactions for RNA: YOL090W

MSH2, Transcript of Protein that binds to DNA mismatches, yeastyeast

Gene MSH2, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH2YOL090W COX10P21592 462 aa2.41□□□□□ -2.02
MSH2YOL090W BET1P22804 142 aa2.41□□□□□ -2.02
MSH2YOL090W SFC1P33303 322 aa2.41□□□□□ -2.02
MSH2YOL090W PTC1P35182 281 aa2.41□□□□□ -2.02
MSH2YOL090W YER181CP40097 107 aa2.41□□□□□ -2.02
MSH2YOL090W ALG9P53868 555 aaKnown RBP2.41□□□□□ -2.02
MSH2YOL090W TVP15Q03860 143 aa2.41□□□□□ -2.02
MSH2YOL090W ATP5P09457 212 aa2.41□□□□□ -2.02
MSH2YOL090W BUD23P25627 275 aaPredicted RBP2.41□□□□□ -2.02
MSH2YOL090W NSG1P38837 291 aa2.41□□□□□ -2.02
MSH2YOL090W RGI1P40043 161 aaPredicted RBP2.41□□□□□ -2.02
MSH2YOL090W PRE5P40302 234 aaKnown RBP2.41□□□□□ -2.02
MSH2YOL090W SLD7Q08457 257 aa2.41□□□□□ -2.02
MSH2YOL090W FYV7Q12247 151 aa2.41□□□□□ -2.02
MSH2YOL090W PHO13P19881 312 aa2.4□□□□□ -2.02
MSH2YOL090W YHR140WP38842 239 aa2.4□□□□□ -2.02
MSH2YOL090W CTR2P38865 189 aa2.4□□□□□ -2.02
MSH2YOL090W KRE9P39005 276 aa2.4□□□□□ -2.02
MSH2YOL090W RRT13P40042 185 aa2.4□□□□□ -2.02
MSH2YOL090W TIF34P40217 347 aaKnown RBP2.4□□□□□ -2.02
MSH2YOL090W AYR1P40471 297 aa2.4□□□□□ -2.02
MSH2YOL090W PFS2P42841 465 aaKnown RBP2.4□□□□□ -2.02
MSH2YOL090W CGI121Q03705 181 aaKnown RBP2.4□□□□□ -2.02
MSH2YOL090W TIR1P10863 254 aa2.4□□□□□ -2.03
MSH2YOL090W RPC19P28000 142 aaKnown RBP2.4□□□□□ -2.03
MSH2YOL090W SUI1P32911 108 aaKnown RBP2.4□□□□□ -2.03
MSH2YOL090W FCY21P40039 528 aa2.4□□□□□ -2.03
MSH2YOL090W MIC19P43594 170 aa2.4□□□□□ -2.03
MSH2YOL090W SFT1P43682 97 aa2.4□□□□□ -2.03
MSH2YOL090W XPT1P47165 209 aa2.4□□□□□ -2.03
MSH2YOL090W YGR039WP53225 103 aa2.4□□□□□ -2.03
MSH2YOL090W HHO1P53551 258 aa2.4□□□□□ -2.03
MSH2YOL090W APS2Q00381 147 aa2.4□□□□□ -2.03
MSH2YOL090W ATG39Q06159 398 aa2.4□□□□□ -2.03
MSH2YOL090W FYV12Q08559 129 aa2.4□□□□□ -2.03
MSH2YOL090W FMP49A0A023PZB3 126 aa2.39□□□□□ -2.03
MSH2YOL090W PHO85P17157 305 aa2.39□□□□□ -2.03
MSH2YOL090W YBL010CP32788 280 aa2.39□□□□□ -2.03
MSH2YOL090W YBL059WP34224 193 aa2.39□□□□□ -2.03
MSH2YOL090W YHL026CP38740 315 aa2.39□□□□□ -2.03
MSH2YOL090W MCH1Q07376 486 aa2.39□□□□□ -2.03
MSH2YOL090W SPC3Q12133 184 aa2.39□□□□□ -2.03
MSH2YOL090W PST1Q12355 444 aa2.39□□□□□ -2.03
MSH2YOL090W RPL9AP05738 191 aaKnown RBP2.39□□□□□ -2.03
MSH2YOL090W URA5P13298 226 aaKnown RBP2.39□□□□□ -2.03
MSH2YOL090W SPT15P13393 240 aaKnown RBP2.39□□□□□ -2.03
MSH2YOL090W CCA1P21269 546 aa2.39□□□□□ -2.03
MSH2YOL090W RNP1P32385 249 aa2.39□□□□□ -2.03
MSH2YOL090W RCN1P36054 211 aa2.39□□□□□ -2.03
MSH2YOL090W RPL14AP36105 138 aaKnown RBP2.39□□□□□ -2.03
MSH2YOL090W RPL14BP38754 138 aaKnown RBP2.39□□□□□ -2.03
MSH2YOL090W RPL9BP51401 191 aaKnown RBP2.39□□□□□ -2.03
MSH2YOL090W YKR005CQ02203 525 aa2.39□□□□□ -2.03
MSH2YOL090W MRPL27P36526 146 aaPredicted RBP2.39□□□□□ -2.03
MSH2YOL090W SMD3P43321 101 aaKnown RBP2.39□□□□□ -2.03
MSH2YOL090W YLR118CQ12354 227 aa2.39□□□□□ -2.03
MSH2YOL090W DDI2P0CH63 225 aa2.38□□□□□ -2.03
MSH2YOL090W DDI3P0CH64 225 aa2.38□□□□□ -2.03
MSH2YOL090W FIS1P40515 155 aa2.38□□□□□ -2.03
MSH2YOL090W YDR391CQ04170 232 aa2.38□□□□□ -2.03
MSH2YOL090W SCW10Q04951 389 aa2.38□□□□□ -2.03
MSH2YOL090W YLR412C-AQ3E742 68 aa2.38□□□□□ -2.03
MSH2YOL090W YBR298C-AQ8TGK4 73 aa2.38□□□□□ -2.03
MSH2YOL090W SRP21P32342 167 aa2.38□□□□□ -2.03
MSH2YOL090W SNC2P33328 115 aa2.38□□□□□ -2.03
MSH2YOL090W SHB17P36136 271 aaKnown RBP2.38□□□□□ -2.03
MSH2YOL090W YAR068WP39564 161 aa2.38□□□□□ -2.03
MSH2YOL090W CAX4P53223 239 aa2.38□□□□□ -2.03
MSH2YOL090W BUD25P85052 153 aa2.38□□□□□ -2.03
MSH2YOL090W TMA23Q03525 211 aa2.38□□□□□ -2.03
MSH2YOL090W FCF1Q05498 189 aaPredicted RBP2.38□□□□□ -2.03
MSH2YOL090W YNL162W-AQ3E7A8 72 aa2.38□□□□□ -2.03
MSH2YOL090W YNL277W-AQ3E7Z0 62 aa2.38□□□□□ -2.03
MSH2YOL090W YAR023CD6VPM8 179 aa2.37□□□□□ -2.03
MSH2YOL090W GPI18P38211 433 aa2.37□□□□□ -2.03
MSH2YOL090W AVT2P39981 480 aa2.37□□□□□ -2.03
MSH2YOL090W YIL054WP40524 105 aa2.37□□□□□ -2.03
MSH2YOL090W GPI2P46961 280 aa2.37□□□□□ -2.03
MSH2YOL090W TIM13P53299 105 aa2.37□□□□□ -2.03
MSH2YOL090W YDR274CP87283 123 aa2.37□□□□□ -2.03
MSH2YOL090W FCY1Q12178 158 aa2.37□□□□□ -2.03
MSH2YOL090W YDR524C-BQ3E6R4 66 aa2.37□□□□□ -2.03
MSH2YOL090W YBR220CP38318 560 aa2.37□□□□□ -2.03
MSH2YOL090W YNL033WP53964 284 aa2.37□□□□□ -2.03
MSH2YOL090W YNL019CP53975 284 aa2.37□□□□□ -2.03
MSH2YOL090W CWC27Q02770 301 aa2.37□□□□□ -2.03
MSH2YOL090W AIM36Q03798 255 aa2.37□□□□□ -2.03
MSH2YOL090W SPG3Q04398 127 aaPredicted RBP2.37□□□□□ -2.03
MSH2YOL090W YOR214CQ12282 236 aa2.37□□□□□ -2.03
MSH2YOL090W ISD11Q6Q560 94 aa2.37□□□□□ -2.03
MSH2YOL090W TIM9O74700 87 aa2.36□□□□□ -2.03
MSH2YOL090W ARO2P28777 376 aaKnown RBP2.36□□□□□ -2.03
MSH2YOL090W FMP46P36141 133 aaKnown RBP2.36□□□□□ -2.03
MSH2YOL090W SKG1P36169 355 aa2.36□□□□□ -2.03
MSH2YOL090W MRPL17P36528 281 aa2.36□□□□□ -2.03
MSH2YOL090W COS8P38723 381 aa2.36□□□□□ -2.03
MSH2YOL090W YGL193CP53097 103 aa2.36□□□□□ -2.03
MSH2YOL090W YNR062CP53748 327 aa2.36□□□□□ -2.03
MSH2YOL090W YMR099CQ03161 297 aaKnown RBP2.36□□□□□ -2.03
MSH2YOL090W MYO1P08964 1928 aa2.36□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 8.9 ms