RNA–Protein interactions for RNA: YOL005C

RPB11, Transcript of RNA polymerase II subunit B12.5, yeastyeast

Gene RPB11, Length 363 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB11YOL005C YFL051CP43552 160 aa1.16□□□□□ -2.22
RPB11YOL005C NUP57P48837 541 aa1.16□□□□□ -2.22
RPB11YOL005C MIC26P50087 233 aa1.16□□□□□ -2.22
RPB11YOL005C PRM8P53174 237 aa1.16□□□□□ -2.22
RPB11YOL005C RCF2P53721 224 aa1.16□□□□□ -2.22
RPB11YOL005C YNL033WP53964 284 aa1.16□□□□□ -2.22
RPB11YOL005C YNL019CP53975 284 aa1.16□□□□□ -2.22
RPB11YOL005C BUD25P85052 153 aa1.16□□□□□ -2.22
RPB11YOL005C YDR249CQ03787 373 aa1.16□□□□□ -2.22
RPB11YOL005C RAF1Q06891 181 aa1.16□□□□□ -2.22
RPB11YOL005C BRX1Q08235 291 aaKnown RBP1.16□□□□□ -2.22
RPB11YOL005C YPR202WQ08993 238 aa1.16□□□□□ -2.22
RPB11YOL005C YOR032W-AQ8TGS1 66 aa1.16□□□□□ -2.22
RPB11YOL005C UTP20P35194 2493 aaKnown RBP1.16□□□□□ -2.22
RPB11YOL005C REP2P03872 296 aa1.15□□□□□ -2.23
RPB11YOL005C KIN28P06242 306 aa1.15□□□□□ -2.23
RPB11YOL005C YBR121C-AP0C5L4 52 aa1.15□□□□□ -2.23
RPB11YOL005C KSS1P14681 368 aa1.15□□□□□ -2.23
RPB11YOL005C STE18P18852 110 aa1.15□□□□□ -2.23
RPB11YOL005C YPK2P18961 677 aa1.15□□□□□ -2.23
RPB11YOL005C PDX3P38075 228 aaKnown RBP1.15□□□□□ -2.23
RPB11YOL005C YBR220CP38318 560 aa1.15□□□□□ -2.23
RPB11YOL005C RTC3P38804 111 aaPredicted RBP1.15□□□□□ -2.23
RPB11YOL005C RMD6P39975 231 aa1.15□□□□□ -2.23
RPB11YOL005C ERG28P40030 148 aa1.15□□□□□ -2.23
RPB11YOL005C YER121WP40076 114 aa1.15□□□□□ -2.23
RPB11YOL005C YNL194CP40169 301 aa1.15□□□□□ -2.23
RPB11YOL005C GCN20P43535 752 aaKnown RBP1.15□□□□□ -2.23
RPB11YOL005C YNR077CP53758 84 aa1.15□□□□□ -2.23
RPB11YOL005C DYN3Q04949 312 aa1.15□□□□□ -2.23
RPB11YOL005C CSI2Q08054 341 aa1.15□□□□□ -2.23
RPB11YOL005C YOR097CQ12274 175 aaPredicted RBP1.15□□□□□ -2.23
RPB11YOL005C YDL180WQ12301 547 aa1.15□□□□□ -2.23
RPB11YOL005C BLM10P43583 2143 aa1.15□□□□□ -2.23
RPB11YOL005C SEC16P48415 2195 aaKnown RBP1.14□□□□□ -2.23
RPB11YOL005C RPL27BP0C2H7 136 aaKnown RBP1.14□□□□□ -2.23
RPB11YOL005C RPS1BP23248 255 aaKnown RBP1.14□□□□□ -2.23
RPB11YOL005C UBC8P28263 218 aa1.14□□□□□ -2.23
RPB11YOL005C FZF1P32805 299 aa1.14□□□□□ -2.23
RPB11YOL005C TIM12P32830 109 aa1.14□□□□□ -2.23
RPB11YOL005C APS1P35181 156 aa1.14□□□□□ -2.23
RPB11YOL005C PRS3P38689 320 aaKnown RBP1.14□□□□□ -2.23
RPB11YOL005C RPS20P38701 121 aaKnown RBP1.14□□□□□ -2.23
RPB11YOL005C YRB2P40517 327 aa1.14□□□□□ -2.23
RPB11YOL005C YGR201CP42936 225 aa1.14□□□□□ -2.23
RPB11YOL005C OTU1P43558 301 aa1.14□□□□□ -2.23
RPB11YOL005C FAR7P43592 221 aa1.14□□□□□ -2.23
RPB11YOL005C MPC1P53157 130 aaKnown RBP1.14□□□□□ -2.23
RPB11YOL005C GET1P53192 235 aa1.14□□□□□ -2.23
RPB11YOL005C SED1Q01589 338 aa1.14□□□□□ -2.23
RPB11YOL005C DML1Q03652 475 aa1.14□□□□□ -2.23
RPB11YOL005C SPC2Q04969 178 aa1.14□□□□□ -2.23
RPB11YOL005C RNH202Q05635 350 aa1.14□□□□□ -2.23
RPB11YOL005C GPI11Q06636 219 aa1.14□□□□□ -2.23
RPB11YOL005C MCP1Q12106 302 aa1.14□□□□□ -2.23
RPB11YOL005C SPC3Q12133 184 aa1.14□□□□□ -2.23
RPB11YOL005C RTR2Q12378 196 aa1.14□□□□□ -2.23
RPB11YOL005C YCL048W-AQ2V2Q2 79 aa1.14□□□□□ -2.23
RPB11YOL005C YKL183C-AQ3E765 70 aa1.14□□□□□ -2.23
RPB11YOL005C YHR214C-EQ8TGK0 99 aa1.14□□□□□ -2.23
RPB11YOL005C Q0297Q9ZZV8 51 aa1.14□□□□□ -2.23
RPB11YOL005C CCW14O13547 238 aa1.13□□□□□ -2.23
RPB11YOL005C COX5BP00425 151 aa1.13□□□□□ -2.23
RPB11YOL005C RPL39P04650 51 aa1.13□□□□□ -2.23
RPB11YOL005C IDH1P28834 360 aaKnown RBP RIP-Chip data1.13□□□□□ -2.23not detected
RPB11YOL005C SVP26P38869 228 aa1.13□□□□□ -2.23
RPB11YOL005C GLE2P40066 365 aa1.13□□□□□ -2.23
RPB11YOL005C FLX1P40464 311 aa1.13□□□□□ -2.23
RPB11YOL005C PAM16P42949 149 aa1.13□□□□□ -2.23
RPB11YOL005C DID2P69771 204 aa1.13□□□□□ -2.23
RPB11YOL005C NUP49Q02199 472 aa1.13□□□□□ -2.23
RPB11YOL005C GRX5Q02784 150 aa1.13□□□□□ -2.23
RPB11YOL005C RCE1Q03530 315 aa1.13□□□□□ -2.23
RPB11YOL005C IRC19Q07843 230 aa1.13□□□□□ -2.23
RPB11YOL005C FIT3Q08907 204 aa1.13□□□□□ -2.23
RPB11YOL005C NSL1Q12143 216 aa1.13□□□□□ -2.23
RPB11YOL005C YOR343CQ12484 108 aa1.13□□□□□ -2.23
RPB11YOL005C MHF2Q3E829 80 aa1.13□□□□□ -2.23
RPB11YOL005C ARG80P07249 177 aa1.12□□□□□ -2.23
RPB11YOL005C SNF4P12904 322 aa1.12□□□□□ -2.23
RPB11YOL005C ATP7P30902 174 aa1.12□□□□□ -2.23
RPB11YOL005C YHL037CP38733 133 aa1.12□□□□□ -2.23
RPB11YOL005C MPM1P40364 252 aa1.12□□□□□ -2.23
RPB11YOL005C YIR020CP40575 100 aa1.12□□□□□ -2.23
RPB11YOL005C MSS2P40990 351 aa1.12□□□□□ -2.23
RPB11YOL005C TMA22P47089 198 aaPredicted RBP1.12□□□□□ -2.23
RPB11YOL005C SIP18P50263 79 aa1.12□□□□□ -2.23
RPB11YOL005C SAY1P53324 424 aa1.12□□□□□ -2.23
RPB11YOL005C PGA1P53896 198 aa1.12□□□□□ -2.23
RPB11YOL005C PET191Q02772 108 aa1.12□□□□□ -2.23
RPB11YOL005C BNA7Q04066 261 aa1.12□□□□□ -2.23
RPB11YOL005C RIM9Q04734 239 aa1.12□□□□□ -2.23
RPB11YOL005C YMR226CQ05016 267 aaKnown RBP1.12□□□□□ -2.23
RPB11YOL005C NMA1Q06178 401 aaKnown RBP1.12□□□□□ -2.23
RPB11YOL005C YOR214CQ12282 236 aa1.12□□□□□ -2.23
RPB11YOL005C TSC3Q3E790 80 aa1.12□□□□□ -2.23
RPB11YOL005C MHF1Q3E835 90 aa1.12□□□□□ -2.23
RPB11YOL005C BPH1P25356 2167 aa1.12□□□□□ -2.23
RPB11YOL005C YDR157WA0A023PZE8 133 aa1.11□□□□□ -2.23
RPB11YOL005C CDC36P06100 191 aaPredicted RBP1.11□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 31.6 ms