RNA–Protein interactions for RNA: YNL330C

RPD3, Transcript of Histone deacetylase, component of both the Rpd3S and Rpd3L complexes, yeastyeast

Gene RPD3, Length 1,302 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPD3YNL330C POS5Q06892 414 aa7.18□□□□□ -1.26
RPD3YNL330C GEP5Q12393 293 aa7.18□□□□□ -1.26
RPD3YNL330C YMR316C-AI2HB70 103 aa7.17□□□□□ -1.26
RPD3YNL330C RPS23AP0CX29 145 aaKnown RBP7.17□□□□□ -1.26
RPD3YNL330C RPS23BP0CX30 145 aa7.17□□□□□ -1.26
RPD3YNL330C HSP12P22943 109 aaKnown RBP7.17□□□□□ -1.26
RPD3YNL330C ICS2P38284 255 aa7.17□□□□□ -1.26
RPD3YNL330C YJL118WP47022 219 aa7.17□□□□□ -1.26
RPD3YNL330C CPD1P53314 239 aa7.17□□□□□ -1.26
RPD3YNL330C RPS22BQ3E7Y3 130 aaKnown RBP7.17□□□□□ -1.26
RPD3YNL330C HMRA1P0CY11 126 aa7.16□□□□□ -1.26
RPD3YNL330C NOP1P15646 327 aaKnown RBP7.16□□□□□ -1.26
RPD3YNL330C MOH1P38191 138 aa7.16□□□□□ -1.26
RPD3YNL330C GAT2P40209 560 aa7.16□□□□□ -1.26
RPD3YNL330C YHP1Q04116 353 aa7.16□□□□□ -1.26
RPD3YNL330C SOD1P00445 154 aaKnown RBP7.15□□□□□ -1.26
RPD3YNL330C PIS1P06197 220 aaKnown RBP7.15□□□□□ -1.26
RPD3YNL330C QRI5P32344 111 aa7.15□□□□□ -1.26
RPD3YNL330C YKL102CP34249 101 aa7.15□□□□□ -1.26
RPD3YNL330C NNK1P36003 928 aa7.15□□□□□ -1.26
RPD3YNL330C YHR173CP38864 112 aa7.15□□□□□ -1.26
RPD3YNL330C GLC8P41818 229 aa7.15□□□□□ -1.26
RPD3YNL330C PIR5P46999 287 aa7.15□□□□□ -1.26
RPD3YNL330C DFR1P07807 211 aaKnown RBP RIP-Chip data7.14□□□□□ -1.27not detected
RPD3YNL330C ATP10P18496 279 aa7.14□□□□□ -1.27
RPD3YNL330C SOR1P35497 357 aaKnown RBP7.14□□□□□ -1.27
RPD3YNL330C CDC40P40968 455 aaPredicted RBP7.14□□□□□ -1.27
RPD3YNL330C DUG3P53871 357 aa7.14□□□□□ -1.27
RPD3YNL330C ATP19P81451 68 aa7.14□□□□□ -1.27
RPD3YNL330C STD1Q02794 444 aa7.14□□□□□ -1.27
RPD3YNL330C SOR2Q07786 357 aa7.14□□□□□ -1.27
RPD3YNL330C YPR014CQ6B0W2 109 aa7.14□□□□□ -1.27
RPD3YNL330C YCL001W-BQ96VH2 84 aa7.14□□□□□ -1.27
RPD3YNL330C RPL31AP0C2H8 113 aaKnown RBP7.13□□□□□ -1.27
RPD3YNL330C RPL31BP0C2H9 113 aaKnown RBP7.13□□□□□ -1.27
RPD3YNL330C MIX23P38162 196 aa7.13□□□□□ -1.27
RPD3YNL330C RPA43P46669 326 aa7.13□□□□□ -1.27
RPD3YNL330C IZH1Q03419 316 aa7.13□□□□□ -1.27
RPD3YNL330C GAT3Q07928 141 aa7.13□□□□□ -1.27
RPD3YNL330C HTB1P02293 131 aaKnown RBP7.12□□□□□ -1.27
RPD3YNL330C CUP2P15315 225 aa7.12□□□□□ -1.27
RPD3YNL330C YKL187CP34231 750 aa7.12□□□□□ -1.27
RPD3YNL330C PAU16P35994 123 aa7.12□□□□□ -1.27
RPD3YNL330C PMU1P36069 295 aa7.12□□□□□ -1.27
RPD3YNL330C PAM17P36147 197 aa7.12□□□□□ -1.27
RPD3YNL330C CRZ1P53968 678 aa7.12□□□□□ -1.27
RPD3YNL330C YOL024WQ08172 172 aa7.12□□□□□ -1.27
RPD3YNL330C PIN2Q12057 282 aa7.12□□□□□ -1.27
RPD3YNL330C YCR024C-BQ3E7Z8 88 aa7.12□□□□□ -1.27
RPD3YNL330C YLR302CO13544 120 aa7.11□□□□□ -1.27
RPD3YNL330C RPL39P04650 51 aa7.11□□□□□ -1.27
RPD3YNL330C YER190C-BP0CX94 160 aa7.11□□□□□ -1.27
RPD3YNL330C YEL077W-AP0CX95 160 aa7.11□□□□□ -1.27
RPD3YNL330C YGR296C-BP0CX96 160 aa7.11□□□□□ -1.27
RPD3YNL330C YPL283W-BP0CX97 160 aa7.11□□□□□ -1.27
RPD3YNL330C YPR204C-AP0CX98 160 aa7.11□□□□□ -1.27
RPD3YNL330C TIR1P10863 254 aa7.11□□□□□ -1.27
RPD3YNL330C YBL071CP38185 102 aa7.11□□□□□ -1.27
RPD3YNL330C CSH1P38287 376 aa7.11□□□□□ -1.27
RPD3YNL330C AME1P38313 324 aa7.11□□□□□ -1.27
RPD3YNL330C YBR220CP38318 560 aa7.11□□□□□ -1.27
RPD3YNL330C UIP3P39547 235 aa7.11□□□□□ -1.27
RPD3YNL330C BNA2P47125 453 aa7.11□□□□□ -1.27
RPD3YNL330C YNR064CP53750 290 aa7.11□□□□□ -1.27
RPD3YNL330C YNR071CP53757 342 aa7.11□□□□□ -1.27
RPD3YNL330C TRI1Q05024 226 aa7.11□□□□□ -1.27
RPD3YNL330C CNL1Q06333 122 aa7.11□□□□□ -1.27
RPD3YNL330C NAT5Q08689 176 aa7.11□□□□□ -1.27
RPD3YNL330C YMR105W-AQ8TGS8 64 aa7.11□□□□□ -1.27
RPD3YNL330C SEN1Q00416 2231 aaKnown RBP7.1□□□□□ -1.27
RPD3YNL330C YBR090CP38253 122 aa7.1□□□□□ -1.27
RPD3YNL330C DOG1P38774 246 aa7.1□□□□□ -1.27
RPD3YNL330C BDH1P39714 382 aa7.1□□□□□ -1.27
RPD3YNL330C YER134CP40081 178 aa7.1□□□□□ -1.27
RPD3YNL330C YFL054CP43549 646 aa7.1□□□□□ -1.27
RPD3YNL330C MRX11Q03079 207 aa7.1□□□□□ -1.27
RPD3YNL330C GIM5Q04493 163 aa7.1□□□□□ -1.27
RPD3YNL330C FIT2Q08906 153 aa7.1□□□□□ -1.27
RPD3YNL330C CSF1Q12150 2958 aa7.1□□□□□ -1.27
RPD3YNL330C YGP1P38616 354 aaKnown RBP7.09□□□□□ -1.27
RPD3YNL330C PRE5P40302 234 aaKnown RBP7.09□□□□□ -1.27
RPD3YNL330C YDL183CP48569 320 aa7.09□□□□□ -1.27
RPD3YNL330C COX18P53239 316 aa7.09□□□□□ -1.27
RPD3YNL330C YMR166CQ03829 368 aa7.09□□□□□ -1.27
RPD3YNL330C WTM2Q12206 467 aa7.09□□□□□ -1.27
RPD3YNL330C VMA16P23968 213 aa7.08□□□□□ -1.28
RPD3YNL330C YHL037CP38733 133 aa7.08□□□□□ -1.28
RPD3YNL330C DOG2P38773 246 aa7.08□□□□□ -1.28
RPD3YNL330C YFL051CP43552 160 aa7.08□□□□□ -1.28
RPD3YNL330C YFL015CP43578 164 aa7.08□□□□□ -1.28
RPD3YNL330C TDA4P47153 279 aa7.08□□□□□ -1.28
RPD3YNL330C YGL118CP53132 145 aa7.08□□□□□ -1.28
RPD3YNL330C RAV2Q03956 351 aa7.08□□□□□ -1.28
RPD3YNL330C SDH7Q04401 133 aa7.08□□□□□ -1.28
RPD3YNL330C API2Q04413 109 aa7.08□□□□□ -1.28
RPD3YNL330C YOR029WQ12243 111 aa7.08□□□□□ -1.28
RPD3YNL330C TPT1Q12272 230 aaKnown RBP7.08□□□□□ -1.28
RPD3YNL330C COX2P00410 251 aa7.07□□□□□ -1.28
RPD3YNL330C HAP3P13434 144 aa7.07□□□□□ -1.28
RPD3YNL330C YCR022CP25620 114 aa7.07□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 81.3 ms