RNA–Protein interactions for RNA: YNL178W

RPS3, Transcript of Protein component of the small (40S) ribosomal subunit, yeast

Gene RPS3, Length 723 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPS3	YNL178W	CSH1	P38287	376 aa		4.99	□□□□□ -1.61
RPS3	YNL178W	DER1	P38307	211 aa		4.99	□□□□□ -1.61
RPS3	YNL178W	RPL14B	P38754	138 aa	Known RBP	4.99	□□□□□ -1.61
RPS3	YNL178W	PTC7	P38797	343 aa		4.99	□□□□□ -1.61
RPS3	YNL178W	BDH1	P39714	382 aa		4.99	□□□□□ -1.61
RPS3	YNL178W	YER188W	P40103	239 aa		4.99	□□□□□ -1.61
RPS3	YNL178W	WWM1	P43582	211 aa	Known RBP	4.99	□□□□□ -1.61
RPS3	YNL178W	DUO1	P53168	247 aa	Known RBP	4.99	□□□□□ -1.61
RPS3	YNL178W	LST7	P53237	242 aa		4.99	□□□□□ -1.61
RPS3	YNL178W	TRI1	Q05024	226 aa		4.99	□□□□□ -1.61
RPS3	YNL178W	SRL1	Q08673	210 aa		4.99	□□□□□ -1.61
RPS3	YNL178W	PCC1	Q3E833	88 aa		4.99	□□□□□ -1.61
RPS3	YNL178W	YBR126W-A	Q8TGU7	68 aa		4.99	□□□□□ -1.61
RPS3	YNL178W	YLR302C	O13544	120 aa		4.98	□□□□□ -1.61
RPS3	YNL178W	YCR022C	P25620	114 aa		4.98	□□□□□ -1.61
RPS3	YNL178W	ALK2	P32789	676 aa	Predicted RBP	4.98	□□□□□ -1.61
RPS3	YNL178W	MRPL38	P35996	138 aa	Predicted RBP	4.98	□□□□□ -1.61
RPS3	YNL178W	POG1	P40473	351 aa		4.98	□□□□□ -1.61
RPS3	YNL178W	SAS2	P40963	338 aa		4.98	□□□□□ -1.61
RPS3	YNL178W	TAX4	P47030	604 aa		4.98	□□□□□ -1.61
RPS3	YNL178W	YGR018C	P53211	109 aa		4.98	□□□□□ -1.61
RPS3	YNL178W	ATC1	Q04005	294 aa		4.98	□□□□□ -1.61
RPS3	YNL178W	YMR253C	Q04835	414 aa		4.98	□□□□□ -1.61
RPS3	YNL178W	PAU1	P0CE88	120 aa		4.97	□□□□□ -1.61
RPS3	YNL178W	PAU14	P0CE89	120 aa		4.97	□□□□□ -1.61
RPS3	YNL178W	PAU6	P0CE90	120 aa		4.97	□□□□□ -1.61
RPS3	YNL178W	PAU18	P0CE91	120 aa		4.97	□□□□□ -1.61
RPS3	YNL178W	PAU8	P0CE92	120 aa		4.97	□□□□□ -1.61
RPS3	YNL178W	PAU11	P0CE93	120 aa		4.97	□□□□□ -1.61
RPS3	YNL178W	MRP2	P10663	115 aa	Predicted RBP	4.97	□□□□□ -1.61
RPS3	YNL178W	AVT5	P38176	459 aa		4.97	□□□□□ -1.61
RPS3	YNL178W	CDS1	P38221	457 aa		4.97	□□□□□ -1.61
RPS3	YNL178W	PAU13	P38725	120 aa		4.97	□□□□□ -1.61
RPS3	YNL178W	DOG2	P38773	246 aa		4.97	□□□□□ -1.61
RPS3	YNL178W	DOG1	P38774	246 aa		4.97	□□□□□ -1.61
RPS3	YNL178W	RTS2	P40962	232 aa		4.97	□□□□□ -1.61
RPS3	YNL178W	YNR071C	P53757	342 aa		4.97	□□□□□ -1.61
RPS3	YNL178W	PAU10	Q03050	120 aa		4.97	□□□□□ -1.61
RPS3	YNL178W	SNO1	Q03144	224 aa		4.97	□□□□□ -1.61
RPS3	YNL178W	PBP4	Q07362	185 aa	Known RBP	4.97	□□□□□ -1.61
RPS3	YNL178W	RXT3	Q07458	294 aa		4.97	□□□□□ -1.61
RPS3	YNL178W	PAU20	Q08322	120 aa		4.97	□□□□□ -1.61
RPS3	YNL178W	PAU9	Q3E770	120 aa		4.97	□□□□□ -1.61
RPS3	YNL178W	CCW14	O13547	238 aa		4.96	□□□□□ -1.62
RPS3	YNL178W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.62	not detected
RPS3	YNL178W	YPS1	P32329	569 aa		4.96	□□□□□ -1.62
RPS3	YNL178W	PRS4	P38063	326 aa	Predicted RBP	4.96	□□□□□ -1.62
RPS3	YNL178W	RRT1	P38192	103 aa		4.96	□□□□□ -1.62
RPS3	YNL178W	LOC1	P43586	204 aa	Predicted RBP	4.96	□□□□□ -1.62
RPS3	YNL178W	IRC23	Q08416	157 aa		4.96	□□□□□ -1.62
RPS3	YNL178W	YOR352W	Q08816	343 aa		4.96	□□□□□ -1.62
RPS3	YNL178W	YOR097C	Q12274	175 aa	Predicted RBP	4.96	□□□□□ -1.62
RPS3	YNL178W	ERV2	Q12284	196 aa		4.96	□□□□□ -1.62
RPS3	YNL178W	CDC7	P06243	507 aa		4.95	□□□□□ -1.62
RPS3	YNL178W	SEC59	P20048	519 aa		4.95	□□□□□ -1.62
RPS3	YNL178W	INO2	P26798	304 aa		4.95	□□□□□ -1.62
RPS3	YNL178W	YKL075C	P36083	450 aa		4.95	□□□□□ -1.62
RPS3	YNL178W	PET100	P38958	111 aa		4.95	□□□□□ -1.62
RPS3	YNL178W	PHS1	P40857	217 aa		4.95	□□□□□ -1.62
RPS3	YNL178W	ATG27	P46989	271 aa		4.95	□□□□□ -1.62
RPS3	YNL178W	DSK2	P48510	373 aa		4.95	□□□□□ -1.62
RPS3	YNL178W	YGR219W	P53307	113 aa		4.95	□□□□□ -1.62
RPS3	YNL178W	SWT21	P53873	357 aa	Predicted RBP	4.95	□□□□□ -1.62
RPS3	YNL178W	YML122C	Q03207	126 aa		4.95	□□□□□ -1.62
RPS3	YNL178W	SDH7	Q04401	133 aa		4.95	□□□□□ -1.62
RPS3	YNL178W	STP4	Q07351	490 aa		4.95	□□□□□ -1.62
RPS3	YNL178W	RPS2	P25443	254 aa	Known RBP	4.94	□□□□□ -1.62
RPS3	YNL178W	TRS20	P38334	175 aa		4.94	□□□□□ -1.62
RPS3	YNL178W	HST4	P53688	370 aa		4.94	□□□□□ -1.62
RPS3	YNL178W	TIM11	P81449	96 aa	Predicted RBP	4.94	□□□□□ -1.62
RPS3	YNL178W	YML108W	Q03759	105 aa		4.94	□□□□□ -1.62
RPS3	YNL178W	SPG4	Q04438	115 aa		4.94	□□□□□ -1.62
RPS3	YNL178W	RPS22A	P0C0W1	130 aa	Known RBP	4.93	□□□□□ -1.62
RPS3	YNL178W	POP5	P28005	173 aa		4.93	□□□□□ -1.62
RPS3	YNL178W	LAC1	P28496	418 aa		4.93	□□□□□ -1.62
RPS3	YNL178W	SFT2	P38166	215 aa		4.93	□□□□□ -1.62
RPS3	YNL178W	IMD2	P38697	523 aa	Known RBP	4.93	□□□□□ -1.62
RPS3	YNL178W	BNS1	P50084	137 aa		4.93	□□□□□ -1.62
RPS3	YNL178W	TIM21	P53220	239 aa		4.93	□□□□□ -1.62
RPS3	YNL178W	CPD1	P53314	239 aa		4.93	□□□□□ -1.62
RPS3	YNL178W	LOA1	Q06508	300 aa		4.93	□□□□□ -1.62
RPS3	YNL178W	AYT1	Q12226	474 aa		4.93	□□□□□ -1.62
RPS3	YNL178W	CYC3	P06182	269 aa		4.92	□□□□□ -1.62
RPS3	YNL178W	ADH3	P07246	375 aa	Known RBP	4.92	□□□□□ -1.62
RPS3	YNL178W	PET494	P07390	489 aa	Predicted RBP	4.92	□□□□□ -1.62
RPS3	YNL178W	YHR213W	P0CI67	198 aa		4.92	□□□□□ -1.62
RPS3	YNL178W	HSP12	P22943	109 aa	Known RBP	4.92	□□□□□ -1.62
RPS3	YNL178W	RNA15	P25299	296 aa	Predicted RBP	4.92	□□□□□ -1.62
RPS3	YNL178W	HMX1	P32339	317 aa		4.92	□□□□□ -1.62
RPS3	YNL178W	NTF2	P33331	125 aa	Known RBP	4.92	□□□□□ -1.62
RPS3	YNL178W	MRPL4	P36517	319 aa		4.92	□□□□□ -1.62
RPS3	YNL178W	YCR041W	P37265	110 aa		4.92	□□□□□ -1.62
RPS3	YNL178W	LSM2	P38203	95 aa	Known RBP	4.92	□□□□□ -1.62
RPS3	YNL178W	PGD1	P40356	397 aa		4.92	□□□□□ -1.62
RPS3	YNL178W	VPS55	P47111	140 aa		4.92	□□□□□ -1.62
RPS3	YNL178W	HHO1	P53551	258 aa		4.92	□□□□□ -1.62
RPS3	YNL178W	NCE103	P53615	221 aa		4.92	□□□□□ -1.62
RPS3	YNL178W	HOR7	Q05827	59 aa		4.92	□□□□□ -1.62
RPS3	YNL178W	LDS2	Q08218	356 aa		4.92	□□□□□ -1.62
RPS3	YNL178W	YPR145C-A	Q2V2P0	78 aa		4.92	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 145.2 ms