RNA–Protein interactions for RNA: YNL049C

SFB2, Transcript of Component of the Sec23p-Sfb2p heterodimer of the COPII vesicle coat, yeastyeast

Gene SFB2, Length 2,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFB2YNL049C RNA15P25299 296 aaPredicted RBP1.21□□□□□ -2.22
SFB2YNL049C HOM6P31116 359 aaKnown RBP1.21□□□□□ -2.22
SFB2YNL049C SKG1P36169 355 aa1.21□□□□□ -2.22
SFB2YNL049C BDH1P39714 382 aa1.21□□□□□ -2.22
SFB2YNL049C EDC2P40023 145 aaPredicted RBP1.21□□□□□ -2.22
SFB2YNL049C SNX4P47057 423 aa1.21□□□□□ -2.22
SFB2YNL049C CAX4P53223 239 aa1.21□□□□□ -2.22
SFB2YNL049C SGF11Q03067 99 aa1.21□□□□□ -2.22
SFB2YNL049C ARC18Q05933 178 aaKnown RBP1.21□□□□□ -2.22
SFB2YNL049C CSM4Q08955 156 aa1.21□□□□□ -2.22
SFB2YNL049C MPD1Q12404 318 aaKnown RBP1.21□□□□□ -2.22
SFB2YNL049C ATG40Q99325 256 aa1.21□□□□□ -2.22
SFB2YNL049C COX5BP00425 151 aa1.2□□□□□ -2.22
SFB2YNL049C SIR2P06700 562 aa1.2□□□□□ -2.22
SFB2YNL049C FUS3P16892 353 aaKnown RBP1.2□□□□□ -2.22
SFB2YNL049C CCA1P21269 546 aa1.2□□□□□ -2.22
SFB2YNL049C NTG1P31378 399 aa1.2□□□□□ -2.22
SFB2YNL049C YBL081WP38180 368 aaKnown RBP1.2□□□□□ -2.22
SFB2YNL049C YBR285WP38354 144 aa1.2□□□□□ -2.22
SFB2YNL049C ASP1P38986 381 aaPredicted RBP1.2□□□□□ -2.22
SFB2YNL049C ERJ5P43613 295 aaPredicted RBP1.2□□□□□ -2.22
SFB2YNL049C SPC1P46965 94 aa1.2□□□□□ -2.22
SFB2YNL049C TOS8P53147 276 aa1.2□□□□□ -2.22
SFB2YNL049C ASI3P53983 676 aa1.2□□□□□ -2.22
SFB2YNL049C DYN3Q04949 312 aa1.2□□□□□ -2.22
SFB2YNL049C BOL1Q3E793 110 aa1.2□□□□□ -2.22
SFB2YNL049C ADK1P07170 222 aaKnown RBP1.2□□□□□ -2.22
SFB2YNL049C RPS20P38701 121 aaKnown RBP1.2□□□□□ -2.22
SFB2YNL049C IKI1P38874 309 aa1.2□□□□□ -2.22
SFB2YNL049C MTW1P39731 289 aa1.2□□□□□ -2.22
SFB2YNL049C FCY21P40039 528 aa1.2□□□□□ -2.22
SFB2YNL049C GNA1P43577 159 aaPredicted RBP1.2□□□□□ -2.22
SFB2YNL049C ARO8P53090 500 aaKnown RBP1.2□□□□□ -2.22
SFB2YNL049C USE1P53146 245 aa1.2□□□□□ -2.22
SFB2YNL049C HRT1Q08273 121 aa1.2□□□□□ -2.22
SFB2YNL049C ATG5Q12380 294 aa1.2□□□□□ -2.22
SFB2YNL049C YPR010C-AA5Z2X5 72 aa1.19□□□□□ -2.22
SFB2YNL049C PRE7P23724 241 aaKnown RBP1.19□□□□□ -2.22
SFB2YNL049C AVT6P40074 448 aa1.19□□□□□ -2.22
SFB2YNL049C SYS1P41544 203 aa1.19□□□□□ -2.22
SFB2YNL049C LSM1P47017 172 aaKnown RBP1.19□□□□□ -2.22
SFB2YNL049C SWT21P53873 357 aaPredicted RBP1.19□□□□□ -2.22
SFB2YNL049C APJ1P53940 528 aa1.19□□□□□ -2.22
SFB2YNL049C SMD1Q02260 146 aaPredicted RBP1.19□□□□□ -2.22
SFB2YNL049C RRP17Q04031 235 aaPredicted RBP1.19□□□□□ -2.22
SFB2YNL049C YCT1Q12235 531 aa1.19□□□□□ -2.22
SFB2YNL049C ACP1P32463 125 aa1.19□□□□□ -2.22
SFB2YNL049C RCN1P36054 211 aa1.19□□□□□ -2.22
SFB2YNL049C MRPS9P38120 278 aa1.19□□□□□ -2.22
SFB2YNL049C YBR013CP38215 129 aa1.19□□□□□ -2.22
SFB2YNL049C GOS1P38736 223 aa1.19□□□□□ -2.22
SFB2YNL049C ERV29P53337 310 aa1.19□□□□□ -2.22
SFB2YNL049C ADF1Q2V2Q1 113 aa1.19□□□□□ -2.22
SFB2YNL049C YGR240C-AQ3E786 66 aa1.19□□□□□ -2.22
SFB2YNL049C YNL146C-AQ3E7Z1 64 aa1.19□□□□□ -2.22
SFB2YNL049C YCR075W-AQ3E830 75 aa1.19□□□□□ -2.22
SFB2YNL049C RPS11AP0CX47 156 aaKnown RBP1.19□□□□□ -2.22
SFB2YNL049C RPS11BP0CX48 156 aaKnown RBP1.19□□□□□ -2.22
SFB2YNL049C CPT1P17898 393 aa1.19□□□□□ -2.22
SFB2YNL049C DOG2P38773 246 aa1.19□□□□□ -2.22
SFB2YNL049C DOG1P38774 246 aa1.19□□□□□ -2.22
SFB2YNL049C THO1P40040 218 aaKnown RBP1.19□□□□□ -2.22
SFB2YNL049C DLS1P40366 167 aa1.19□□□□□ -2.22
SFB2YNL049C FAR7P43592 221 aa1.19□□□□□ -2.22
SFB2YNL049C YJR056CP47115 236 aa1.19□□□□□ -2.22
SFB2YNL049C YGL034CP53186 121 aa1.19□□□□□ -2.22
SFB2YNL049C YGR017WP53210 297 aa1.19□□□□□ -2.22
SFB2YNL049C PAU12P53343 120 aa1.19□□□□□ -2.22
SFB2YNL049C YNL033WP53964 284 aa1.19□□□□□ -2.22
SFB2YNL049C YNL019CP53975 284 aa1.19□□□□□ -2.22
SFB2YNL049C HSK3P69852 69 aa1.19□□□□□ -2.22
SFB2YNL049C GPI11Q06636 219 aa1.19□□□□□ -2.22
SFB2YNL049C YOR186WQ08560 144 aa1.19□□□□□ -2.22
SFB2YNL049C YPL264CQ08980 353 aa1.19□□□□□ -2.22
SFB2YNL049C YLR126CQ12288 251 aa1.19□□□□□ -2.22
SFB2YNL049C YBR063CP38083 404 aa1.18□□□□□ -2.22
SFB2YNL049C SNF11P38956 169 aa1.18□□□□□ -2.22
SFB2YNL049C POR2P40478 281 aa1.18□□□□□ -2.22
SFB2YNL049C RPL9BP51401 191 aaKnown RBP1.18□□□□□ -2.22
SFB2YNL049C BRR6P53062 197 aa1.18□□□□□ -2.22
SFB2YNL049C LPP1Q04396 274 aa1.18□□□□□ -2.22
SFB2YNL049C SPC2Q04969 178 aa1.18□□□□□ -2.22
SFB2YNL049C DXO1Q06349 442 aa1.18□□□□□ -2.22
SFB2YNL049C YBL112CQ3E7Y4 105 aa1.18□□□□□ -2.22
SFB2YNL049C YLR365WQ7LIF2 110 aa1.18□□□□□ -2.22
SFB2YNL049C RPL25P04456 142 aaKnown RBP1.18□□□□□ -2.22
SFB2YNL049C RPL9AP05738 191 aaKnown RBP1.18□□□□□ -2.22
SFB2YNL049C RPL2AP0CX45 254 aaKnown RBP1.18□□□□□ -2.22
SFB2YNL049C RPL2BP0CX46 254 aaKnown RBP1.18□□□□□ -2.22
SFB2YNL049C NHP6BP11633 99 aaKnown RBP1.18□□□□□ -2.22
SFB2YNL049C RPL24BP24000 155 aaKnown RBP1.18□□□□□ -2.22
SFB2YNL049C YRB2P40517 327 aa1.18□□□□□ -2.22
SFB2YNL049C GTO3Q04806 366 aa1.18□□□□□ -2.22
SFB2YNL049C ATG17Q06410 417 aa1.18□□□□□ -2.22
SFB2YNL049C YPS3Q12303 508 aa1.18□□□□□ -2.22
SFB2YNL049C PRR2Q12310 699 aa1.18□□□□□ -2.22
SFB2YNL049C SNU23Q12368 194 aaPredicted RBP1.18□□□□□ -2.22
SFB2YNL049C SNC2P33328 115 aa1.17□□□□□ -2.22
SFB2YNL049C ECM33P38248 429 aaKnown RBP1.17□□□□□ -2.22
SFB2YNL049C ERG28P40030 148 aa1.17□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 118.9 ms