RNA–Protein interactions for RNA: YMR022W

UBC7, Transcript of Ubiquitin conjugating enzyme, yeast

Gene UBC7, Length 498 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC7	YMR022W	MIX14	Q04341	121 aa		0.38	□□□□□ -2.35
UBC7	YMR022W	FSF1	Q12029	327 aa	Known RBP	0.38	□□□□□ -2.35
UBC7	YMR022W	ATG40	Q99325	256 aa		0.38	□□□□□ -2.35
UBC7	YMR022W	SIR2	P06700	562 aa		0.37	□□□□□ -2.35
UBC7	YMR022W	YBR121C-A	P0C5L4	52 aa		0.37	□□□□□ -2.35
UBC7	YMR022W	GCN3	P14741	305 aa		0.37	□□□□□ -2.35
UBC7	YMR022W	APA2	P22108	325 aa		0.37	□□□□□ -2.35
UBC7	YMR022W	PRX1	P34227	261 aa	Known RBP	0.37	□□□□□ -2.35
UBC7	YMR022W	CLG1	P35190	452 aa		0.37	□□□□□ -2.35
UBC7	YMR022W	YHL042W	P38729	150 aa		0.37	□□□□□ -2.35
UBC7	YMR022W	GIM4	P40005	111 aa	Known RBP	0.37	□□□□□ -2.35
UBC7	YMR022W	YER121W	P40076	114 aa		0.37	□□□□□ -2.35
UBC7	YMR022W	RFC4	P40339	323 aa	Known RBP	0.37	□□□□□ -2.35
UBC7	YMR022W	YDR274C	P87283	123 aa		0.37	□□□□□ -2.35
UBC7	YMR022W	BNA7	Q04066	261 aa		0.37	□□□□□ -2.35
UBC7	YMR022W	FUS2	Q05670	677 aa		0.37	□□□□□ -2.35
UBC7	YMR022W	YHR214C-E	Q8TGK0	99 aa		0.37	□□□□□ -2.35
UBC7	YMR022W	SEY1	Q99287	776 aa		0.37	□□□□□ -2.35
UBC7	YMR022W	YLR236C	A0A023PZG4	107 aa		0.36	□□□□□ -2.35
UBC7	YMR022W	PRP18	P33411	251 aa	Predicted RBP	0.36	□□□□□ -2.35
UBC7	YMR022W	CBT1	P36038	271 aa	Predicted RBP	0.36	□□□□□ -2.35
UBC7	YMR022W	AIM2	P39721	246 aa		0.36	□□□□□ -2.35
UBC7	YMR022W	ERG28	P40030	148 aa		0.36	□□□□□ -2.35
UBC7	YMR022W	YNL194C	P40169	301 aa		0.36	□□□□□ -2.35
UBC7	YMR022W	FIP1	P45976	327 aa		0.36	□□□□□ -2.35
UBC7	YMR022W	SED1	Q01589	338 aa		0.36	□□□□□ -2.35
UBC7	YMR022W	YPR174C	Q06616	221 aa	Predicted RBP	0.36	□□□□□ -2.35
UBC7	YMR022W	LCL2	Q08045	131 aa		0.36	□□□□□ -2.35
UBC7	YMR022W	ABP140	Q08641	628 aa	Known RBP	0.36	□□□□□ -2.35
UBC7	YMR022W	RAD28	Q12021	506 aa		0.36	□□□□□ -2.35
UBC7	YMR022W	RUD3	Q12234	484 aa	Known RBP	0.36	□□□□□ -2.35
UBC7	YMR022W	RPL35A	P0CX84	120 aa	Known RBP	0.35	□□□□□ -2.35
UBC7	YMR022W	RPL35B	P0CX85	120 aa	Known RBP	0.35	□□□□□ -2.35
UBC7	YMR022W	YHR214C-D	P0CX93	97 aa		0.35	□□□□□ -2.35
UBC7	YMR022W	RPB3	P16370	318 aa	Known RBP	0.35	□□□□□ -2.35
UBC7	YMR022W	MER1	P16523	270 aa		0.35	□□□□□ -2.35
UBC7	YMR022W	SEN2	P16658	377 aa		0.35	□□□□□ -2.35
UBC7	YMR022W	ROX3	P25046	220 aa		0.35	□□□□□ -2.35
UBC7	YMR022W	YCR090C	P25654	182 aa	Known RBP	0.35	□□□□□ -2.35
UBC7	YMR022W	SPS18	P32572	300 aa		0.35	□□□□□ -2.35
UBC7	YMR022W	TCA17	P32613	152 aa		0.35	□□□□□ -2.35
UBC7	YMR022W	UTP30	P36144	274 aa	Known RBP	0.35	□□□□□ -2.35
UBC7	YMR022W	RTC3	P38804	111 aa	Predicted RBP	0.35	□□□□□ -2.35
UBC7	YMR022W	YFL065C	P43539	102 aa		0.35	□□□□□ -2.35
UBC7	YMR022W	OTU1	P43558	301 aa		0.35	□□□□□ -2.35
UBC7	YMR022W	IRC18	P47056	224 aa		0.35	□□□□□ -2.35
UBC7	YMR022W	AIM25	P47140	327 aa		0.35	□□□□□ -2.35
UBC7	YMR022W	GET1	P53192	235 aa		0.35	□□□□□ -2.35
UBC7	YMR022W	PDR17	P53844	350 aa		0.35	□□□□□ -2.35
UBC7	YMR022W	LSM7	P53905	115 aa	Known RBP	0.35	□□□□□ -2.35
UBC7	YMR022W	YMR295C	Q03559	197 aa		0.35	□□□□□ -2.35
UBC7	YMR022W	YDR249C	Q03787	373 aa		0.35	□□□□□ -2.35
UBC7	YMR022W	HNT1	Q04344	158 aa	Known RBP	0.35	□□□□□ -2.35
UBC7	YMR022W	PRP11	Q07350	266 aa	Predicted RBP	0.35	□□□□□ -2.35
UBC7	YMR022W	MCP1	Q12106	302 aa		0.35	□□□□□ -2.35
UBC7	YMR022W	GIS3	Q12418	502 aa		0.35	□□□□□ -2.35
UBC7	YMR022W	YCL048W-A	Q2V2Q2	79 aa		0.35	□□□□□ -2.35
UBC7	YMR022W	YKL183C-A	Q3E765	70 aa		0.35	□□□□□ -2.35
UBC7	YMR022W	YFR032C-B	Q8TGU2	87 aa		0.35	□□□□□ -2.35
UBC7	YMR022W	JIP3	O13555	125 aa		0.34	□□□□□ -2.36
UBC7	YMR022W	CDC33	P07260	213 aa	Known RBP	0.34	□□□□□ -2.36
UBC7	YMR022W	SEC11	P15367	167 aa		0.34	□□□□□ -2.36
UBC7	YMR022W	YPK2	P18961	677 aa		0.34	□□□□□ -2.36
UBC7	YMR022W	PAN3	P36102	679 aa	Predicted RBP	0.34	□□□□□ -2.36
UBC7	YMR022W	YCR087C-A	P37263	153 aa		0.34	□□□□□ -2.36
UBC7	YMR022W	YPL073C	P40323	161 aa		0.34	□□□□□ -2.36
UBC7	YMR022W	MSS2	P40990	351 aa		0.34	□□□□□ -2.36
UBC7	YMR022W	GLR1	P41921	483 aa	Known RBP	0.34	□□□□□ -2.36
UBC7	YMR022W	CCC1	P47818	322 aa		0.34	□□□□□ -2.36
UBC7	YMR022W	CWC23	P52868	283 aa	Predicted RBP	0.34	□□□□□ -2.36
UBC7	YMR022W	MGA1	P53050	456 aa		0.34	□□□□□ -2.36
UBC7	YMR022W	YGR050C	P53231	118 aa		0.34	□□□□□ -2.36
UBC7	YMR022W	YMR226C	Q05016	267 aa	Known RBP	0.34	□□□□□ -2.36
UBC7	YMR022W	GGA1	Q06336	557 aa		0.34	□□□□□ -2.36
UBC7	YMR022W	YOL160W	Q08321	113 aa		0.34	□□□□□ -2.36
UBC7	YMR022W	HTB1	P02293	131 aa	Known RBP	0.33	□□□□□ -2.36
UBC7	YMR022W	HTB2	P02294	131 aa		0.33	□□□□□ -2.36
UBC7	YMR022W	SEC4	P07560	215 aa	Known RBP	0.33	□□□□□ -2.36
UBC7	YMR022W	YSF3	P0C074	85 aa	Predicted RBP	0.33	□□□□□ -2.36
UBC7	YMR022W	RPL27A	P0C2H6	136 aa	Known RBP	0.33	□□□□□ -2.36
UBC7	YMR022W	ATP15	P21306	62 aa		0.33	□□□□□ -2.36
UBC7	YMR022W	TAH1	P25638	111 aa	Predicted RBP	0.33	□□□□□ -2.36
UBC7	YMR022W	SUA7	P29055	345 aa	Predicted RBP	0.33	□□□□□ -2.36
UBC7	YMR022W	NTG1	P31378	399 aa		0.33	□□□□□ -2.36
UBC7	YMR022W	SEC17	P32602	292 aa		0.33	□□□□□ -2.36
UBC7	YMR022W	IKI1	P38874	309 aa		0.33	□□□□□ -2.36
UBC7	YMR022W	MTW1	P39731	289 aa		0.33	□□□□□ -2.36
UBC7	YMR022W	YER134C	P40081	178 aa		0.33	□□□□□ -2.36
UBC7	YMR022W	HYR1	P40581	163 aa	Known RBP	0.33	□□□□□ -2.36
UBC7	YMR022W	TMA22	P47089	198 aa	Predicted RBP	0.33	□□□□□ -2.36
UBC7	YMR022W	ARP3	P47117	449 aa	Known RBP	0.33	□□□□□ -2.36
UBC7	YMR022W	COG5	P53951	403 aa		0.33	□□□□□ -2.36
UBC7	YMR022W	UPS3	Q04006	179 aa		0.33	□□□□□ -2.36
UBC7	YMR022W	ARO80	Q04052	950 aa		0.33	□□□□□ -2.36
UBC7	YMR022W	DYN3	Q04949	312 aa		0.33	□□□□□ -2.36
UBC7	YMR022W	DGA1	Q08650	418 aa		0.33	□□□□□ -2.36
UBC7	YMR022W	YDR010C	Q12426	110 aa		0.33	□□□□□ -2.36
UBC7	YMR022W	ODC2	Q99297	307 aa		0.33	□□□□□ -2.36
UBC7	YMR022W	FMP49	A0A023PZB3	126 aa		0.32	□□□□□ -2.36
UBC7	YMR022W	YDR157W	A0A023PZE8	133 aa		0.32	□□□□□ -2.36

Retrieved 100 of 5,963 RNA–protein pairs in 50.7 ms