RNA–Protein interactions for RNA: YMR012W

CLU1, Transcript of Subunit of the eukaryotic translation initiation factor 3 (eIF3), yeast

Gene CLU1, Length 3,834 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CLU1	YMR012W	RTR2	Q12378	196 aa		0.8	□□□□□ -2.28
CLU1	YMR012W	ATG5	Q12380	294 aa		0.8	□□□□□ -2.28
CLU1	YMR012W	HIS3	P06633	220 aa		0.79	□□□□□ -2.28
CLU1	YMR012W	TIR1	P10863	254 aa		0.79	□□□□□ -2.28
CLU1	YMR012W	YKR032W	P36127	104 aa		0.79	□□□□□ -2.28
CLU1	YMR012W	YHR140W	P38842	239 aa		0.79	□□□□□ -2.28
CLU1	YMR012W	GEP7	P53171	287 aa		0.79	□□□□□ -2.28
CLU1	YMR012W	LSM3	P57743	89 aa	Known RBP	0.79	□□□□□ -2.28
CLU1	YMR012W	YPL257W	Q08974	193 aa		0.79	□□□□□ -2.28
CLU1	YMR012W	SPC3	Q12133	184 aa		0.79	□□□□□ -2.28
CLU1	YMR012W	SME1	Q12330	94 aa	Predicted RBP	0.79	□□□□□ -2.28
CLU1	YMR012W	TIM9	O74700	87 aa		0.79	□□□□□ -2.28
CLU1	YMR012W	PHO85	P17157	305 aa		0.79	□□□□□ -2.28
CLU1	YMR012W	RNA14	P25298	677 aa	Known RBP	0.79	□□□□□ -2.28
CLU1	YMR012W	ERG2	P32352	222 aa		0.79	□□□□□ -2.28
CLU1	YMR012W	VPS51	P36116	164 aa		0.79	□□□□□ -2.28
CLU1	YMR012W	YER135C	P40082	130 aa		0.79	□□□□□ -2.28
CLU1	YMR012W	RIO2	P40160	425 aa	Known RBP	0.79	□□□□□ -2.28
CLU1	YMR012W	YMR134W	P40207	237 aa		0.79	□□□□□ -2.28
CLU1	YMR012W	ERJ5	P43613	295 aa	Predicted RBP	0.79	□□□□□ -2.28
CLU1	YMR012W	HHO1	P53551	258 aa		0.79	□□□□□ -2.28
CLU1	YMR012W	MHT1	Q12525	324 aa		0.79	□□□□□ -2.28
CLU1	YMR012W	YIL152W	P40455	235 aa		0.79	□□□□□ -2.28
CLU1	YMR012W	FIP1	P45976	327 aa		0.79	□□□□□ -2.28
CLU1	YMR012W	LSM1	P47017	172 aa	Known RBP	0.79	□□□□□ -2.28
CLU1	YMR012W	MIC26	P50087	233 aa		0.79	□□□□□ -2.28
CLU1	YMR012W	APJ1	P53940	528 aa		0.79	□□□□□ -2.28
CLU1	YMR012W	HAL1	Q01766	294 aa		0.79	□□□□□ -2.28
CLU1	YMR012W	OSH6	Q02201	448 aa		0.79	□□□□□ -2.28
CLU1	YMR012W	SMD1	Q02260	146 aa	Predicted RBP	0.79	□□□□□ -2.28
CLU1	YMR012W	PLP1	Q04004	230 aa		0.79	□□□□□ -2.28
CLU1	YMR012W	EGD2	P38879	174 aa	Known RBP	0.78	□□□□□ -2.28
CLU1	YMR012W	AVT6	P40074	448 aa		0.78	□□□□□ -2.28
CLU1	YMR012W	OST2	P46964	130 aa		0.78	□□□□□ -2.28
CLU1	YMR012W	YHP1	Q04116	353 aa		0.78	□□□□□ -2.28
CLU1	YMR012W	FUN26	P31381	517 aa		0.78	□□□□□ -2.28
CLU1	YMR012W	NVJ1	P38881	321 aa		0.78	□□□□□ -2.28
CLU1	YMR012W	ARP3	P47117	449 aa	Known RBP	0.78	□□□□□ -2.28
CLU1	YMR012W	AVO2	Q04749	426 aa		0.78	□□□□□ -2.28
CLU1	YMR012W	FCF1	Q05498	189 aa	Predicted RBP	0.78	□□□□□ -2.28
CLU1	YMR012W	RPL22A	P05749	121 aa	Known RBP	0.78	□□□□□ -2.29
CLU1	YMR012W	CMD1	P06787	147 aa	Known RBP	0.78	□□□□□ -2.29
CLU1	YMR012W	YER039C-A	P0CD97	72 aa		0.78	□□□□□ -2.29
CLU1	YMR012W	SRP21	P32342	167 aa		0.78	□□□□□ -2.29
CLU1	YMR012W	MIX23	P38162	196 aa		0.78	□□□□□ -2.29
CLU1	YMR012W	YGL101W	P53144	215 aa		0.78	□□□□□ -2.29
CLU1	YMR012W	THI74	Q04083	370 aa		0.78	□□□□□ -2.29
CLU1	YMR012W	SFM1	Q12314	213 aa		0.78	□□□□□ -2.29
CLU1	YMR012W	ADH1	P00330	348 aa	Known RBP	0.77	□□□□□ -2.29
CLU1	YMR012W	YEL045C	P32616	141 aa		0.77	□□□□□ -2.29
CLU1	YMR012W	EST3	Q03096	181 aa		0.77	□□□□□ -2.29
CLU1	YMR012W	MIX17	Q03667	156 aa		0.77	□□□□□ -2.29
CLU1	YMR012W	NEJ1	Q06148	342 aa		0.77	□□□□□ -2.29
CLU1	YMR012W	DAS2	Q12084	232 aa		0.77	□□□□□ -2.29
CLU1	YMR012W	YPL245W	Q12179	454 aa	Known RBP	0.77	□□□□□ -2.29
CLU1	YMR012W	YOR214C	Q12282	236 aa		0.77	□□□□□ -2.29
CLU1	YMR012W	IES3	Q12345	250 aa		0.77	□□□□□ -2.29
CLU1	YMR012W	RFC2	P40348	353 aa		0.77	□□□□□ -2.29
CLU1	YMR012W	COS10	P52924	374 aa		0.77	□□□□□ -2.29
CLU1	YMR012W	KRE28	Q04431	385 aa		0.77	□□□□□ -2.29
CLU1	YMR012W	SPC24	Q04477	213 aa		0.77	□□□□□ -2.29
CLU1	YMR012W	HRD1	Q08109	551 aa		0.77	□□□□□ -2.29
CLU1	YMR012W	SEC4	P07560	215 aa	Known RBP	0.77	□□□□□ -2.29
CLU1	YMR012W	VPH2	P32341	215 aa		0.77	□□□□□ -2.29
CLU1	YMR012W	RPS27A	P35997	82 aa	Known RBP	0.77	□□□□□ -2.29
CLU1	YMR012W	RPS27B	P38711	82 aa		0.77	□□□□□ -2.29
CLU1	YMR012W	AIM2	P39721	246 aa		0.77	□□□□□ -2.29
CLU1	YMR012W	SFT1	P43682	97 aa		0.77	□□□□□ -2.29
CLU1	YMR012W	ILM1	P47155	203 aa		0.77	□□□□□ -2.29
CLU1	YMR012W	SAY1	P53324	424 aa		0.77	□□□□□ -2.29
CLU1	YMR012W	UBC7	Q02159	165 aa		0.77	□□□□□ -2.29
CLU1	YMR012W	YMR315W	Q04869	349 aa	Known RBP	0.77	□□□□□ -2.29
CLU1	YMR012W	YPL247C	Q12523	523 aa		0.77	□□□□□ -2.29
CLU1	YMR012W	TOM1	Q03280	3268 aa		0.77	□□□□□ -2.29
CLU1	YMR012W	PHO13	P19881	312 aa		0.76	□□□□□ -2.29
CLU1	YMR012W	POP4	P38336	279 aa		0.76	□□□□□ -2.29
CLU1	YMR012W	SDT1	P53078	280 aa		0.76	□□□□□ -2.29
CLU1	YMR012W	YGR164W	P53291	111 aa		0.76	□□□□□ -2.29
CLU1	YMR012W	ABF2	Q02486	183 aa		0.76	□□□□□ -2.29
CLU1	YMR012W	SWP1	Q02795	286 aa		0.76	□□□□□ -2.29
CLU1	YMR012W	RAV2	Q03956	351 aa		0.76	□□□□□ -2.29
CLU1	YMR012W	RPS20	P38701	121 aa	Known RBP	0.76	□□□□□ -2.29
CLU1	YMR012W	IPI1	P38803	334 aa	Predicted RBP	0.76	□□□□□ -2.29
CLU1	YMR012W	TIM8	P57744	87 aa		0.76	□□□□□ -2.29
CLU1	YMR012W	YDR391C	Q04170	232 aa		0.76	□□□□□ -2.29
CLU1	YMR012W	YSF3	P0C074	85 aa	Predicted RBP	0.76	□□□□□ -2.29
CLU1	YMR012W	BUD23	P25627	275 aa	Predicted RBP	0.76	□□□□□ -2.29
CLU1	YMR012W	HSP150	P32478	413 aa		0.76	□□□□□ -2.29
CLU1	YMR012W	CTR2	P38865	189 aa		0.76	□□□□□ -2.29
CLU1	YMR012W	YIL059C	P40520	121 aa		0.76	□□□□□ -2.29
CLU1	YMR012W	TTI2	P47168	421 aa		0.76	□□□□□ -2.29
CLU1	YMR012W	RCF2	P53721	224 aa		0.76	□□□□□ -2.29
CLU1	YMR012W	LSM7	P53905	115 aa	Known RBP	0.76	□□□□□ -2.29
CLU1	YMR012W	AAH1	P53909	347 aa		0.76	□□□□□ -2.29
CLU1	YMR012W	GRH1	Q04410	372 aa	Known RBP	0.76	□□□□□ -2.29
CLU1	YMR012W	RDI1	Q12434	202 aa		0.76	□□□□□ -2.29
CLU1	YMR012W	TSC3	Q3E790	80 aa		0.76	□□□□□ -2.29
CLU1	YMR012W	YPR014C	Q6B0W2	109 aa		0.76	□□□□□ -2.29
CLU1	YMR012W	COX5B	P00425	151 aa		0.75	□□□□□ -2.29
CLU1	YMR012W	NMT1	P14743	455 aa		0.75	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 35.7 ms