RNA–Protein interactions for RNA: YLR360W

VPS38, Transcript of Part of a Vps34p phosphatidylinositol 3-kinase complex, yeastyeast

Gene VPS38, Length 1,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS38YLR360W RPS12P48589 143 aaKnown RBP1.52□□□□□ -2.17
VPS38YLR360W NOP19P53317 196 aaPredicted RBP1.52□□□□□ -2.17
VPS38YLR360W YIP3P53633 176 aa1.52□□□□□ -2.17
VPS38YLR360W NUP49Q02199 472 aa1.52□□□□□ -2.17
VPS38YLR360W DYN2Q02647 92 aa1.52□□□□□ -2.17
VPS38YLR360W SHH3Q04487 196 aa1.52□□□□□ -2.17
VPS38YLR360W YMR253CQ04835 414 aa1.52□□□□□ -2.17
VPS38YLR360W YLR126CQ12288 251 aa1.52□□□□□ -2.17
VPS38YLR360W YGL194C-AQ2V2P6 80 aa1.52□□□□□ -2.17
VPS38YLR360W RIB3Q99258 208 aa1.52□□□□□ -2.17
VPS38YLR360W YOR304C-AO14468 76 aa1.51□□□□□ -2.17
VPS38YLR360W REP2P03872 296 aa1.51□□□□□ -2.17
VPS38YLR360W QCR2P07257 368 aa1.51□□□□□ -2.17
VPS38YLR360W BCY1P07278 416 aaKnown RBP1.51□□□□□ -2.17
VPS38YLR360W SPS2P08459 502 aa1.51□□□□□ -2.17
VPS38YLR360W MAG1P22134 296 aaKnown RBP1.51□□□□□ -2.17
VPS38YLR360W SRY1P36007 326 aa1.51□□□□□ -2.17
VPS38YLR360W YBR219CP38317 127 aa1.51□□□□□ -2.17
VPS38YLR360W IPI1P38803 334 aaPredicted RBP1.51□□□□□ -2.17
VPS38YLR360W YER085CP40058 173 aa1.51□□□□□ -2.17
VPS38YLR360W RFC4P40339 323 aaKnown RBP1.51□□□□□ -2.17
VPS38YLR360W HOC1P47124 396 aa1.51□□□□□ -2.17
VPS38YLR360W NUP57P48837 541 aa1.51□□□□□ -2.17
VPS38YLR360W GET1P53192 235 aa1.51□□□□□ -2.17
VPS38YLR360W NQM1P53228 333 aaPredicted RBP1.51□□□□□ -2.17
VPS38YLR360W CUS2P53830 285 aaPredicted RBP1.51□□□□□ -2.17
VPS38YLR360W SNO1Q03144 224 aa1.51□□□□□ -2.17
VPS38YLR360W RNH202Q05635 350 aa1.51□□□□□ -2.17
VPS38YLR360W PAM18Q07914 168 aa1.51□□□□□ -2.17
VPS38YLR360W YPR202WQ08993 238 aa1.51□□□□□ -2.17
VPS38YLR360W YLR053CQ12026 108 aa1.51□□□□□ -2.17
VPS38YLR360W SPC3Q12133 184 aa1.51□□□□□ -2.17
VPS38YLR360W MDM32Q12171 622 aa1.51□□□□□ -2.17
VPS38YLR360W USB1Q12208 290 aaKnown RBP1.51□□□□□ -2.17
VPS38YLR360W YPR145C-AQ2V2P0 78 aa1.51□□□□□ -2.17
VPS38YLR360W VMA9Q3E7B6 73 aa1.51□□□□□ -2.17
VPS38YLR360W PCC1Q3E833 88 aa1.51□□□□□ -2.17
VPS38YLR360W CDC33P07260 213 aaKnown RBP1.5□□□□□ -2.17
VPS38YLR360W FUN14P18411 198 aa1.5□□□□□ -2.17
VPS38YLR360W UBC8P28263 218 aa1.5□□□□□ -2.17
VPS38YLR360W SUA7P29055 345 aaPredicted RBP1.5□□□□□ -2.17
VPS38YLR360W UGX2P32772 223 aa1.5□□□□□ -2.17
VPS38YLR360W DER1P38307 211 aa1.5□□□□□ -2.17
VPS38YLR360W NSG1P38837 291 aa1.5□□□□□ -2.17
VPS38YLR360W IKI1P38874 309 aa1.5□□□□□ -2.17
VPS38YLR360W ERG28P40030 148 aa1.5□□□□□ -2.17
VPS38YLR360W YER135CP40082 130 aa1.5□□□□□ -2.17
VPS38YLR360W GLR1P41921 483 aaKnown RBP1.5□□□□□ -2.17
VPS38YLR360W RPA43P46669 326 aa1.5□□□□□ -2.17
VPS38YLR360W MOG1P47123 218 aa1.5□□□□□ -2.17
VPS38YLR360W SBH2P52871 88 aa1.5□□□□□ -2.17
VPS38YLR360W YGL235WP53071 178 aa1.5□□□□□ -2.17
VPS38YLR360W JAC1P53193 184 aa1.5□□□□□ -2.17
VPS38YLR360W DIG2Q03373 323 aaKnown RBP1.5□□□□□ -2.17
VPS38YLR360W UPS3Q04006 179 aa1.5□□□□□ -2.17
VPS38YLR360W YMR226CQ05016 267 aaKnown RBP1.5□□□□□ -2.17
VPS38YLR360W GPM2Q12008 311 aa1.5□□□□□ -2.17
VPS38YLR360W RAD28Q12021 506 aa1.5□□□□□ -2.17
VPS38YLR360W YRA1Q12159 226 aaKnown RBP1.5□□□□□ -2.17
VPS38YLR360W TPO4Q12256 659 aa1.5□□□□□ -2.17
VPS38YLR360W YIR021W-AQ3E739 70 aa1.5□□□□□ -2.17
VPS38YLR360W QCR7P00128 127 aa1.49□□□□□ -2.17
VPS38YLR360W RPL22AP05749 121 aaKnown RBP1.49□□□□□ -2.17
VPS38YLR360W CKS1P20486 150 aaKnown RBP1.49□□□□□ -2.17
VPS38YLR360W RPS1BP23248 255 aaKnown RBP1.49□□□□□ -2.17
VPS38YLR360W SRB6P32570 121 aa1.49□□□□□ -2.17
VPS38YLR360W UPS2P35200 230 aa1.49□□□□□ -2.17
VPS38YLR360W YKL075CP36083 450 aa1.49□□□□□ -2.17
VPS38YLR360W YBR063CP38083 404 aa1.49□□□□□ -2.17
VPS38YLR360W ECM33P38248 429 aaKnown RBP1.49□□□□□ -2.17
VPS38YLR360W TRS20P38334 175 aa1.49□□□□□ -2.17
VPS38YLR360W PRS3P38689 320 aaKnown RBP1.49□□□□□ -2.17
VPS38YLR360W SRP14P38985 146 aa1.49□□□□□ -2.17
VPS38YLR360W PGD1P40356 397 aa1.49□□□□□ -2.17
VPS38YLR360W GPI14P47088 403 aaKnown RBP1.49□□□□□ -2.17
VPS38YLR360W YJR149WP47177 404 aa1.49□□□□□ -2.17
VPS38YLR360W TRM9P49957 279 aa1.49□□□□□ -2.17
VPS38YLR360W MPA43P53583 542 aaPredicted RBP1.49□□□□□ -2.17
VPS38YLR360W YPL067CQ02754 198 aa1.49□□□□□ -2.17
VPS38YLR360W CSI2Q08054 341 aa1.49□□□□□ -2.17
VPS38YLR360W FSF1Q12029 327 aaKnown RBP1.49□□□□□ -2.17
VPS38YLR360W YLR046CQ12253 270 aa1.49□□□□□ -2.17
VPS38YLR360W JLP1Q12358 412 aa1.49□□□□□ -2.17
VPS38YLR360W SLO1Q3E784 85 aa1.49□□□□□ -2.17
VPS38YLR360W YCL012CQ8J0M4 134 aa1.49□□□□□ -2.17
VPS38YLR360W MED11Q99278 115 aa1.49□□□□□ -2.17
VPS38YLR360W YPL229WQ99395 206 aa1.49□□□□□ -2.17
VPS38YLR360W COX5BP00425 151 aa1.48□□□□□ -2.17
VPS38YLR360W ATP5P09457 212 aa1.48□□□□□ -2.17
VPS38YLR360W RPL27AP0C2H6 136 aaKnown RBP1.48□□□□□ -2.17
VPS38YLR360W RPL27BP0C2H7 136 aaKnown RBP1.48□□□□□ -2.17
VPS38YLR360W YPR170W-BP0C5R9 85 aa1.48□□□□□ -2.17
VPS38YLR360W NHP6BP11633 99 aaKnown RBP1.48□□□□□ -2.17
VPS38YLR360W RPB3P16370 318 aaKnown RBP1.48□□□□□ -2.17
VPS38YLR360W RPL24BP24000 155 aaKnown RBP1.48□□□□□ -2.17
VPS38YLR360W PBN1P25580 416 aa1.48□□□□□ -2.17
VPS38YLR360W OCH1P31755 480 aa1.48□□□□□ -2.17
VPS38YLR360W SNC2P33328 115 aa1.48□□□□□ -2.17
VPS38YLR360W MRPL28P36527 147 aa1.48□□□□□ -2.17
VPS38YLR360W RIB1P38066 345 aa1.48□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 43.4 ms