RNA–Protein interactions for RNA: YLR336C

SGD1, Transcript of Essential nuclear protein, yeast

Gene SGD1, Length 2,700 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SGD1	YLR336C	RME1	P32338	300 aa	Known RBP	0.84	□□□□□ -2.28
SGD1	YLR336C	YPR127W	Q06494	345 aa		0.84	□□□□□ -2.28
SGD1	YLR336C	RPA190	P10964	1664 aa	Known RBP	0.83	□□□□□ -2.28
SGD1	YLR336C	MET31	Q03081	177 aa		0.83	□□□□□ -2.28
SGD1	YLR336C	TAR1	Q8TGM6	124 aa		0.83	□□□□□ -2.28
SGD1	YLR336C	SLH1	P53327	1967 aa	Known RBP	0.83	□□□□□ -2.28
SGD1	YLR336C	THI74	Q04083	370 aa		0.83	□□□□□ -2.28
SGD1	YLR336C	DUR1,2	P32528	1835 aa	Known RBP	0.82	□□□□□ -2.28
SGD1	YLR336C	ETR1	P38071	380 aa		0.82	□□□□□ -2.28
SGD1	YLR336C	CCS1	P40202	249 aa	Known RBP	0.82	□□□□□ -2.28
SGD1	YLR336C	YDR391C	Q04170	232 aa		0.82	□□□□□ -2.28
SGD1	YLR336C	DNF2	Q12675	1612 aa		0.82	□□□□□ -2.28
SGD1	YLR336C	YEL028W	P39989	153 aa		0.82	□□□□□ -2.28
SGD1	YLR336C	TIM13	P53299	105 aa		0.82	□□□□□ -2.28
SGD1	YLR336C	YBL010C	P32788	280 aa		0.81	□□□□□ -2.28
SGD1	YLR336C	HUA1	P40325	198 aa		0.81	□□□□□ -2.28
SGD1	YLR336C	TLG1	Q03322	224 aa		0.81	□□□□□ -2.28
SGD1	YLR336C	PLP1	Q04004	230 aa		0.81	□□□□□ -2.28
SGD1	YLR336C	RAD6	P06104	172 aa		0.81	□□□□□ -2.28
SGD1	YLR336C	CMD1	P06787	147 aa	Known RBP	0.81	□□□□□ -2.28
SGD1	YLR336C	MAK31	P23059	88 aa		0.81	□□□□□ -2.28
SGD1	YLR336C	XPT1	P47165	209 aa		0.81	□□□□□ -2.28
SGD1	YLR336C	RPL37A	P49166	88 aa	Known RBP	0.81	□□□□□ -2.28
SGD1	YLR336C	GSC2	P40989	1895 aa		0.81	□□□□□ -2.28
SGD1	YLR336C	YRA2	P36036	203 aa	Known RBP RIP-Chip data	0.8	□□□□□ -2.28	not detected
SGD1	YLR336C	YBR242W	P38331	238 aa		0.8	□□□□□ -2.28
SGD1	YLR336C	YEL073C	P39974	107 aa		0.8	□□□□□ -2.28
SGD1	YLR336C	SYM1	Q06563	197 aa		0.8	□□□□□ -2.28
SGD1	YLR336C	HIR3	P47171	1648 aa		0.8	□□□□□ -2.28
SGD1	YLR336C	HAP1	P0CE41	1502 aa		0.8	□□□□□ -2.28
SGD1	YLR336C	AVO2	Q04749	426 aa		0.8	□□□□□ -2.28
SGD1	YLR336C	YMR030W-A	Q3E760	96 aa		0.8	□□□□□ -2.28
SGD1	YLR336C	CMC2	Q3E7A4	109 aa		0.8	□□□□□ -2.28
SGD1	YLR336C	VPS51	P36116	164 aa		0.8	□□□□□ -2.28
SGD1	YLR336C	MRPL15	P36523	253 aa		0.8	□□□□□ -2.28
SGD1	YLR336C	YGL101W	P53144	215 aa		0.8	□□□□□ -2.28
SGD1	YLR336C	YPR203W	Q08994	102 aa		0.8	□□□□□ -2.28
SGD1	YLR336C	RDI1	Q12434	202 aa		0.8	□□□□□ -2.28
SGD1	YLR336C	RPO31	P04051	1460 aa		0.79	□□□□□ -2.28
SGD1	YLR336C	CDC25	P04821	1589 aa		0.79	□□□□□ -2.28
SGD1	YLR336C	MMS1	Q06211	1407 aa		0.79	□□□□□ -2.28
SGD1	YLR336C	TRM3	Q07527	1436 aa		0.79	□□□□□ -2.28
SGD1	YLR336C	NUF2	P33895	451 aa		0.79	□□□□□ -2.28
SGD1	YLR336C	GLR1	P41921	483 aa	Known RBP	0.79	□□□□□ -2.28
SGD1	YLR336C	ORM1	P53224	222 aa		0.79	□□□□□ -2.28
SGD1	YLR336C	TOR1	P35169	2470 aa		0.79	□□□□□ -2.28
SGD1	YLR336C	THO2	P53552	1597 aa	Known RBP	0.79	□□□□□ -2.28
SGD1	YLR336C	YHL037C	P38733	133 aa		0.79	□□□□□ -2.28
SGD1	YLR336C	PAC10	P48363	199 aa		0.79	□□□□□ -2.28
SGD1	YLR336C	SSK2	P53599	1579 aa		0.78	□□□□□ -2.28
SGD1	YLR336C	UBI4	P0CG63	381 aa	Known RBP	0.78	□□□□□ -2.28
SGD1	YLR336C	SBH2	P52871	88 aa		0.78	□□□□□ -2.28
SGD1	YLR336C	GRX5	Q02784	150 aa		0.78	□□□□□ -2.28
SGD1	YLR336C	YDL241W	Q07738	123 aa		0.78	□□□□□ -2.28
SGD1	YLR336C	CAT8	P39113	1433 aa		0.78	□□□□□ -2.28
SGD1	YLR336C	UBC8	P28263	218 aa		0.78	□□□□□ -2.29
SGD1	YLR336C	PTC1	P35182	281 aa		0.78	□□□□□ -2.29
SGD1	YLR336C	AME1	P38313	324 aa		0.77	□□□□□ -2.29
SGD1	YLR336C	MOB1	P40484	314 aa		0.77	□□□□□ -2.29
SGD1	YLR336C	NQM1	P53228	333 aa	Predicted RBP	0.77	□□□□□ -2.29
SGD1	YLR336C	LIP1	Q03579	150 aa		0.77	□□□□□ -2.29
SGD1	YLR336C	YMR007W	Q03675	126 aa		0.77	□□□□□ -2.29
SGD1	YLR336C	FIT1	Q04433	528 aa		0.77	□□□□□ -2.29
SGD1	YLR336C	YPR202W	Q08993	238 aa		0.77	□□□□□ -2.29
SGD1	YLR336C	AHT1	P29589	182 aa		0.77	□□□□□ -2.29
SGD1	YLR336C	FES1	P38260	290 aa		0.77	□□□□□ -2.29
SGD1	YLR336C	YGR269W	P40326	108 aa		0.77	□□□□□ -2.29
SGD1	YLR336C	YFL051C	P43552	160 aa		0.77	□□□□□ -2.29
SGD1	YLR336C	TMA20	P89886	181 aa	Predicted RBP	0.77	□□□□□ -2.29
SGD1	YLR336C	YLR053C	Q12026	108 aa		0.77	□□□□□ -2.29
SGD1	YLR336C	YRF1-1	P0CX20	1796 aa		0.76	□□□□□ -2.29
SGD1	YLR336C	YRF1-5	P0CX21	1796 aa		0.76	□□□□□ -2.29
SGD1	YLR336C	YRF1-8	P0CX22	1796 aa		0.76	□□□□□ -2.29
SGD1	YLR336C	SLM6	P38343	150 aa		0.76	□□□□□ -2.29
SGD1	YLR336C	CCC1	P47818	322 aa		0.76	□□□□□ -2.29
SGD1	YLR336C	HHT1	P61830	136 aa		0.76	□□□□□ -2.29
SGD1	YLR336C	YML079W	Q03629	201 aa		0.76	□□□□□ -2.29
SGD1	YLR336C	YDR102C	Q03864	110 aa		0.76	□□□□□ -2.29
SGD1	YLR336C	YLR046C	Q12253	270 aa		0.76	□□□□□ -2.29
SGD1	YLR336C	POL1	P13382	1468 aa		0.76	□□□□□ -2.29
SGD1	YLR336C	GEA2	P39993	1459 aa	Known RBP	0.76	□□□□□ -2.29
SGD1	YLR336C	ATP5	P09457	212 aa		0.76	□□□□□ -2.29
SGD1	YLR336C	INO4	P13902	151 aa		0.76	□□□□□ -2.29
SGD1	YLR336C	YPR114W	Q06107	315 aa		0.76	□□□□□ -2.29
SGD1	YLR336C	LCL2	Q08045	131 aa		0.76	□□□□□ -2.29
SGD1	YLR336C	HRD1	Q08109	551 aa		0.76	□□□□□ -2.29
SGD1	YLR336C	PEP1	P32319	1579 aa		0.76	□□□□□ -2.29
SGD1	YLR336C	QCR2	P07257	368 aa		0.75	□□□□□ -2.29
SGD1	YLR336C	SHB17	P36136	271 aa	Known RBP	0.75	□□□□□ -2.29
SGD1	YLR336C	LSM3	P57743	89 aa	Known RBP	0.75	□□□□□ -2.29
SGD1	YLR336C	YDL157C	Q12082	118 aa		0.75	□□□□□ -2.29
SGD1	YLR336C	SPS2	P08459	502 aa		0.75	□□□□□ -2.29
SGD1	YLR336C	YPT31	P38555	223 aa	Known RBP	0.75	□□□□□ -2.29
SGD1	YLR336C	ATG10	Q07879	167 aa		0.75	□□□□□ -2.29
SGD1	YLR336C	RPL30	P14120	105 aa	Known RBP	0.74	□□□□□ -2.29
SGD1	YLR336C	YCF1	P39109	1515 aa	Known RBP	0.74	□□□□□ -2.29
SGD1	YLR336C	MRS4	P23500	304 aa		0.74	□□□□□ -2.29
SGD1	YLR336C	HTD2	P38790	280 aa	Known RBP	0.74	□□□□□ -2.29
SGD1	YLR336C	FIP1	P45976	327 aa		0.74	□□□□□ -2.29
SGD1	YLR336C	YNR064C	P53750	290 aa		0.74	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 43.8 ms